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The map label for this gene is ytqB [H]

Identifier: 169834297

GI number: 169834297

Start: 699432

End: 699989

Strand: Direct

Name: ytqB [H]

Synonym: SPH_0748

Alternate gene names: 169834297

Gene position: 699432-699989 (Clockwise)

Preceding gene: 169832771

Following gene: 169832694

Centisome position: 31.15

GC content: 43.37

Gene sequence:

>558_bases
ATGAAAAGACCACTTGAGATGGCACATGATTTTTTGGCTGAGGTCGTGACAAAAGAGGATGTCGTAGTGGATGCGACTAT
GGGAAATGGTCATGACACGCTTTTTTTAGCCAAGCTAGCCAAGCAAGTCTATGCCTTTGATATTCAGAAGCAAGCCTTGG
AAAAGACCCAAGAGCGTTTGCATCAGGCTGACTTGACAAATGCCCAGTTAATCTTGCAAGGCCATGAGACACTGGACCAG
TTTGTGATAAAAGCTAAGGCAGGGATTTTTAATCTGGGCTATTTGCCGTCAGCTGATAAGTCTGTCATCACCCGACCGCA
GACAACGATTGAGGCATTAGAAAAGCTATGTGGCTTACTTGTCAAAGGTGGACGAATTGCTATTATGATTTACTATGGTC
ATGAAGGAGGCGACCTCGAGAGAGATGCTGTCTTGGATTTTGTAATCCAGTTGAACCAACAAGAGTACACAGCTGCCATT
TACCGAACTTTAAACCAAGTCAACAACCCGCCGTTTTTAGTGATGATTGAAAAATTAGAGAGATACAGACATGGATAA

Upstream 100 bases:

>100_bases
TGGAGCCTCAAAAAATGGGAAGTCCTCAACAGCATTGAGATGGAGATGCGACGTCGTGGAAGTGTTCAAGGATGCAAGGC
TGTAAAACAGGAGTTTGAAA

Downstream 100 bases:

>100_bases
ACAATACCTACACGAAAAGCTGGATGCCATGCGCCAGAATTTTGTTGAATCAACCCACCACGAACGATCGGTGGGCGTGC
TAGACCAAGCGCATATGAGC

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQADLTNAQLILQGHETLDQ
FVIKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAI
YRTLNQVNNPPFLVMIEKLERYRHG

Sequences:

>Translated_185_residues
MKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQADLTNAQLILQGHETLDQ
FVIKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAI
YRTLNQVNNPPFLVMIEKLERYRHG
>Mature_185_residues
MKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERLHQADLTNAQLILQGHETLDQ
FVIKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLLVKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAI
YRTLNQVNNPPFLVMIEKLERYRHG

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 20883; Mature: 20883

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQADLTNAQLILQGHETLDQFVIKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLL
HHHCCCCCEEEEECHHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHH
VKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAIYRTLNQVNNPPFLVMIEKLE
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHH
RYRHG
HHCCC
>Mature Secondary Structure
MKRPLEMAHDFLAEVVTKEDVVVDATMGNGHDTLFLAKLAKQVYAFDIQKQALEKTQERL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQADLTNAQLILQGHETLDQFVIKAKAGIFNLGYLPSADKSVITRPQTTIEALEKLCGLL
HHHCCCCCEEEEECHHHHHHHHHHHHCCEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHH
VKGGRIAIMIYYGHEGGDLERDAVLDFVIQLNQQEYTAAIYRTLNQVNNPPFLVMIEKLE
CCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEHHHHH
RYRHG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]