Click here to switch to the map view.

The map label for this gene is 169833938

Identifier: 169833938

GI number: 169833938

Start: 28987

End: 29307

Strand: Direct

Name: 169833938

Synonym: SPH_0036

Alternate gene names: NA

Gene position: 28987-29307 (Clockwise)

Preceding gene: 169834410

Following gene: 169833210

Centisome position: 1.29

GC content: 45.17

Gene sequence:

>321_bases
ATGTTTGAACCACCGATTTTAGACCAGTTGATGGGGGTTGGAGCCTTACTGCTTGGATTTGCAGGGGCTTGCCGTCATAT
CAAATTGCAGGAACAACGCAAGGAAGAAGAAAGACGAGAAGAGCAAGAATTTGCGTCTATGATTATTCAAGGCTATAACC
ATGCTTACGAACGTGGTAGAGAAGCTGAACGTCAAGAAATCCGCAAGAATATTCGTCGTCCGTTCAAGGGCTTTACCTAC
GACAATGAACCGCCTCAAGGATTGCGTCCTGAGCCGTTAGCTTTGCCAGAACCTAAACAGTCTGCAATCAGATTTTTGTA
A

Upstream 100 bases:

>100_bases
TCTAATCAAATATAATAACTTTACTAAAAGGCTTCTGGACAAGGTCTTAGCAAAATTATTTGACTATATTATAGCACAAA
AAGAGGATAAGGAGATAAAA

Downstream 100 bases:

>100_bases
TGAGGAGGTCAGGAAATGGAAGAATTGATTGAATGGCTTGAAACCAAAGAAAAATTAAACAGGGAAATGATTTCTGACGA
GGAAACATCGGACTTTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQGYNHAYERGREAERQEIRKNIRRPFKGFTY
DNEPPQGLRPEPLALPEPKQSAIRFL

Sequences:

>Translated_106_residues
MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQGYNHAYERGREAERQEIRKNIRRPFKGFTY
DNEPPQGLRPEPLALPEPKQSAIRFL
>Mature_106_residues
MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQGYNHAYERGREAERQEIRKNIRRPFKGFTY
DNEPPQGLRPEPLALPEPKQSAIRFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12408; Mature: 12408

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQGYNHAYERGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAERQEIRKNIRRPFKGFTYDNEPPQGLRPEPLALPEPKQSAIRFL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MFEPPILDQLMGVGALLLGFAGACRHIKLQEQRKEEERREEQEFASMIIQGYNHAYERGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EAERQEIRKNIRRPFKGFTYDNEPPQGLRPEPLALPEPKQSAIRFL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA