Click here to switch to the map view.

The map label for this gene is 169833782

Identifier: 169833782

GI number: 169833782

Start: 75287

End: 76855

Strand: Direct

Name: 169833782

Synonym: SPH_0100

Alternate gene names: NA

Gene position: 75287-76855 (Clockwise)

Preceding gene: 169833859

Following gene: 169834373

Centisome position: 3.35

GC content: 38.69

Gene sequence:

>1569_bases
ATGAGCCTATTTCAAAAAGTAAAAGACTTTTTTAGTCGAGGGAGGTATTACATGCAGACATCAAATCTTAATAGTATTTT
GGAACATCCAAAAATTGCAGTGACTCAAGAGGAGTATGACCGGATTAAGAGAAATCTAGTCTACTATCAATCAAAATGGG
ATGATGTTCAGTACAAGAATACGGATGGAGATATTAAATCCCGTCCAATGAATCACTTGCCAATTGCAAGAACAGCATCG
AAGAAGATTGCTAGCTTAGTTTACAATGAACAGGCAACTATCACAACAAAAAACGAAATTTTACAGAAATTTTTGGATGA
CATGCTAACTAACGACCGATTCAATAAGAATTTTGAGCGGTATCTAGAAAGCTGTTTGGCACTTGGTGGCCTAGCTATGC
GCCCTTATATTGATGGGGATAAGGTCAGAGTGGCATTTATTCAAGCGCCTGTGTTCTTTCCACTAGAAAGCAACACACAA
GATGTTTCAAGTGCTGCAATCCTTACTAAGACTATCAAATCTGAGGGGCGTAAGAACGTTTACTATACCCTTGTTGAATT
TCACGAATGGGTAACAGCAGACGGACAAGAAACAGGTAGCACAAACGATAAAAAGTATTATCGTATTACAAATGAACTTT
ATAGGTCAGATGTGAATGATGTGTTAGGTCAACGTGTGAACTTGAGTGAACTAGACAAGTACAAAAATTTAGAGCCTGTA
ACAGTCTTTGAAAACCTATCAAGACCTCTATTTACTTATCTAAAAACTCCAGGTATGAATAACAAAGACATCAACAGCCC
TCTTGGATTGTCTATCTTTGATAACGCAAAGACGACTATTGACTTCATCAATCGTTCTTACGATGAATTTATGTGGGAAG
TGAGGATGGGACAAAGGCGAGTTATTGTGCCCGAACATCTAACACAAAGACAATATCAACGTCCAGATGGAACAATAGAT
TTTAGACCACGGTTTGATGTTGAGCAGAATGTTTATATGCAAATTGGCGGCTCTAGTATGGATGCCGGGGGCATTACAGA
CCTTACCTCACCAATTCGAGCAAATGATTATATTTTGGCGATTTCAGAGGGATTGAAACTCTTTGAAATGCAGATTGGTG
TATCAAGTGGCATGTTTACATTCGATGGTCAAGGAATGAAAACCGCAACAGAAATTGTCAGCGAGAACTCAGACACTTAT
CAGATGCGAAGTAGTATTGTCGCACTTGTTGAACAATCTATCAAGGAGCTTTGTGTTTCAATGTGTGAGCTCGGTAAGGC
GGTAGGGGTTTACAGCGGAGAAATTCCAGAACTTGATGATATTTCAGTTAATTTGGATGATGGTGTATTTACTGATAGGC
ATGCAGAACTTGATTATTGGGCTAAAATGGTAGCCGCAGGATTCTCAACCAAAAAACGGGCAATTGGTAAGACATTAAAT
ATTTCTGATGTTGAGGCAGAAAAAGAACTCAATGCTATCAATAGTGAGTTGCTACCTATGAATGATGCCGAACTTGCTAT
TTATGGTATGCATGACCAAAACGAGGAGGAAGAAGATGACAAAGGTTAA

Upstream 100 bases:

>100_bases
CAAAGAAGATGACCATACATGCGACACAACACAGTATTTTGTGTTAGACAATGCAAAATTGCTCGGTTTGCGTGTTGGTA
ACGTTTAGAGGAGGACGATC

Downstream 100 bases:

>100_bases
ATTCGGAGTTACTAGTGTTGACTACTCAGCAAGCATTGAAGATACACCAACAATAAAACTAGGTTTAATAATTAGAGGGA
GCGGGAGACTAGATGCCTCT

Product: phage minor capsid protein

Products: NA

Alternate protein names: Phage Minor Capsid Protein; Minor Protein Gp; Minor Capsid Protein R; Portal Protein

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS
KKIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFERYLESCLALGGLAMRPYIDGDKVRVAFIQAPVFFPLESNTQ
DVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPV
TVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPDGTID
FRPRFDVEQNVYMQIGGSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIVSENSDTY
QMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGKTLN
ISDVEAEKELNAINSELLPMNDAELAIYGMHDQNEEEEDDKG

Sequences:

>Translated_522_residues
MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS
KKIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFERYLESCLALGGLAMRPYIDGDKVRVAFIQAPVFFPLESNTQ
DVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPV
TVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPDGTID
FRPRFDVEQNVYMQIGGSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIVSENSDTY
QMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGKTLN
ISDVEAEKELNAINSELLPMNDAELAIYGMHDQNEEEEDDKG
>Mature_521_residues
SLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTASK
KIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFERYLESCLALGGLAMRPYIDGDKVRVAFIQAPVFFPLESNTQD
VSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPVT
VFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPDGTIDF
RPRFDVEQNVYMQIGGSSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIVSENSDTYQ
MRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGKTLNI
SDVEAEKELNAINSELLPMNDAELAIYGMHDQNEEEEDDKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59552; Mature: 59421

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKN
CCHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEEHHHHHHHHHHHEEEECCCCCCEEEC
TDGDIKSRPMNHLPIARTASKKIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFER
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHH
YLESCLALGGLAMRPYIDGDKVRVAFIQAPVFFPLESNTQDVSSAAILTKTIKSEGRKNV
HHHHHHHHCCEEECCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCCCE
YYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPV
EEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
TVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRR
HHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCE
VIVPEHLTQRQYQRPDGTIDFRPRFDVEQNVYMQIGGSSMDAGGITDLTSPIRANDYILA
EECCHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
ISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIVSENSDTYQMRSSIVALVEQSIKELCVS
ECCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGKTLN
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCC
ISDVEAEKELNAINSELLPMNDAELAIYGMHDQNEEEEDDKG
CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKN
CHHHHHHHHHHCCEEEEEECCHHHHHCCCCEEEEHHHHHHHHHHHEEEECCCCCCEEEC
TDGDIKSRPMNHLPIARTASKKIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFER
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCHHHH
YLESCLALGGLAMRPYIDGDKVRVAFIQAPVFFPLESNTQDVSSAAILTKTIKSEGRKNV
HHHHHHHHCCEEECCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCCCE
YYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLEPV
EEEHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
TVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRR
HHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCE
VIVPEHLTQRQYQRPDGTIDFRPRFDVEQNVYMQIGGSSMDAGGITDLTSPIRANDYILA
EECCHHHHHHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
ISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIVSENSDTYQMRSSIVALVEQSIKELCVS
ECCCCEEEEEEECCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKRAIGKTLN
HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCC
ISDVEAEKELNAINSELLPMNDAELAIYGMHDQNEEEEDDKG
CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA