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The map label for this gene is 169833760

Identifier: 169833760

GI number: 169833760

Start: 1368625

End: 1369881

Strand: Direct

Name: 169833760

Synonym: SPH_1484

Alternate gene names: NA

Gene position: 1368625-1369881 (Clockwise)

Preceding gene: 169832885

Following gene: 169834400

Centisome position: 60.95

GC content: 36.83

Gene sequence:

>1257_bases
ATGGAACAATTACATTTTATCACAAAACTGCTCGATATTAAAGACCCAAACATCAAGATTCTAGATATCATCAATATGGA
TACCCACAAAGAAATTATCGCTAAGCTGGATTATGAGGCTCCATCTTGCCCTGATTGTGGAAGTCTAATGAAGAAATATG
ACTTTCAAAAACCGTCTAAGATCCCTTACCTCGAAACAACTGGTATGCCTTCTAGAATTCTCCTTAAAAAACGCCGTTTC
AAGTGCTATCACTGTTCAAAAATGATGGTTGCTGAGACTCCCCTGGTAAAGAAAAATCACCAAATCCCTCGTATCATCAA
CCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATCAGCTTTCCATTTCAACTTCAACTG
TCATTCGCAAGCTCAATGACTTTCACTTTGAGCATGATTTTTCTCGGCTTCCAAAGATTATGTCTTGGGATGAGTATGCT
TTTACAAAGGGAAAGATGAGTTTCATTGCGCAAGATTTTGATAATCTTAATATTATCACTGTTCTTGAAGGCAGAACACA
AGCTGTCATCCGAAATCACTTTCTTCGCTACGATAGAGCCGTTCGTTGTCAAGTGAAAATCATTACGATGGATATGTTTA
GTCCTTACTATGACTTGGCTAAACAGCTTTTTCCGTGTGCTAAAATCGTTCTAGATCGTTTCCATATTATCCAACATCTC
AGCCGTGCCATGAGTCGTTTTCGTGTTCAAATTATGAATCAGTTTGAACGAAAATCTCATGAATACAAGGCTATCAAGCG
TTACTGGAAACTCATCCAACAGGATAGTCGTAAACTCAGCGATAAACGTTTTTATCGCCCTACTTTTCGCATGCACTTAA
CAAATAAAGAAATTCTTGACAAGATTTTAAGCTATTCAGAAGACTTGAAACACCACTATCAGATCTATCAACTCTTACTT
TTTCACTTTCAGAATAAGGAACCGGAGAAATTTTTCGGACTCATTGAGGACAATCTTAAGCAGGTTCATCCTCTTTTTCA
GACTGTCTTTAAAACCTTTCTAAAGAACAAAGAGAAAATCGTCAACGCCCTTCAACTACACTATTCTAATGCCAAACTGG
AAGCGACCAATAATCTCATCAAACTTATCAAGCGCAATGCCTTTGGTTTTCGGAACTTTGAAAACTTCAAAAAACGGATT
TTTATCGCCCTGAATATCAAAAAAGAAAGGACGAAATTTGTCCTTTCTCAAGCTTAG

Upstream 100 bases:

>100_bases
AAATCCCCTATGGATATTATGGAGCTTATTTTTGTGTAGAAAAAAAGTCCCATATGACCTATAATGAAAAGCGACAAAAC
AACTCATTAGAAAGAATCAT

Downstream 100 bases:

>100_bases
CTTTTCTTCAACCCACTACAGTTGACAAAGAGCCACAAAAATCCTGCCAAAGAATTTTTGGCAGGAAACCAAATCAATTT
ATCAGTTTCTATCAATCGCT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLKKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSQA

Sequences:

>Translated_418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLKKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSQA
>Mature_418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLKKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSQA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 50025; Mature: 50025

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
IPYLETTGMPSRILLKKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYAFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
EECCCHHHHHHHHHHHHCCEEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
KILSYSEDLKHHYQIYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSQA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC
>Mature Secondary Structure
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
IPYLETTGMPSRILLKKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLSISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYAFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
EECCCHHHHHHHHHHHHCCEEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRFRVQIMNQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
KILSYSEDLKHHYQIYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKNKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTKFVLSQA
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387149 [H]