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The map label for this gene is abgA [H]

Identifier: 169833680

GI number: 169833680

Start: 620265

End: 621680

Strand: Direct

Name: abgA [H]

Synonym: SPH_0677

Alternate gene names: 169833680

Gene position: 620265-621680 (Clockwise)

Preceding gene: 169833006

Following gene: 169832943

Centisome position: 27.62

GC content: 33.62

Gene sequence:

>1416_bases
ATGACCATTTTTCCAGATGATTTTCTTTGGGGTGGAGCTGTTGCAGCTAATCAAGTAGAGGGAGCATATAATGAAGATGG
TAAGGGCTTATCAGTTCAGGATGTGTTACCCAAAGGTGGATTAGGAGAAGCAACAGAAAATCCTACAGAAGATAACTTAA
AATTATTAGGTATTGATTTTTATCATAAATATAAGGAAGATATAACCTTGTTTTCTGAAATGGGCTTTAATGTTTTTCGT
ACTTCTATTGCATGGAGTAGAATTTTTCCAAAAGGAGATGAAGAAGAACCTAACGAAGCTGGTTTGAAATATTATGATGA
ATTGTTTGATGAACTACATGCTCACGGGATAGAGCCACTTGTAACTCTTTCACACTATGAGACTCCATTATATTTAGCAA
GAAAATATCATGGATGGATTGATAGGAGAATGATTCATTTTTATGAAAAATTTGCTCGAACAGTTTTAGAAAGGTATAAA
GATAAAGTTAAATATTGGCTTACATTTAACGAAGTAAACTCTGTTTTGGAATTACCGTTTACTAGTGGAGGAATAGATAT
ACCTAAGGAGAATCTTTCGAAACAAGAATTATATCAAGCTATACATCATGAATTAGTCGCCTCGAGTTTGGTTACAAAAA
TTGCTCGTGAGATTAATTCAGAGTTTAAGGTGGGGTGTATGGTATTAGCTATGCCAGCTTATCCAATGACTCCAAATCCA
AAAGATGTATGGGCGACTCATGAGTATGAGAATCTAAATTATCTATTTTCAGATGTGCATGTTAGAGGTTATTATCCGAA
TTATGCAAAAAGATATTTTAAGGAACATGACATTAACATAGAGTTTGCAGCTGAAGATGCAGAGTTATTAAAAAATTATA
CTGTAGATTTTTTATCCTTTAGCTATTACATGAGTGTGACTCAATCTGCTCTTCCAACACAGTATAATTCAGGAGAAGGG
AATATTATTGGTGGTTTAGTAAATCCTTATTTAGAGTCTTCTGAGTGGGGATGGCAAATTGATCCAATTGGACTACGTAT
AATTTTAAATAGATATTATGACCGTTATCAAATTCCATTATTTATAGTGGAAAACGGATTAGGTGCTAAAGATCAACTAA
TAAAAGATGAATTTAATAACTTAACCGTCCAAGATGATTATAGAATTCAGTATATGAAAGAACATTTATTGCAAGTAGCT
GAAGCTCTACAAGATGGTGTGGAAATTATGGGCTATACGTCTTGGGGATGTATTGACTGCGTTTCTATGTCCACTGCACA
GCTTTCTAAGAGGTACGGTCTCATTTATGTTGATCGAAATGATGATGGAAATGGCACATTCAATCGATATAAGAAAATGT
CCTTTACTTGGTATAAAGGAGTGATTGAATCAAATGGAGAATCCTTATTCAAATAG

Upstream 100 bases:

>100_bases
AACGAATACCAATGATTTTCTAGATGTATTAGTATTACCTAATAATCAGACAATCGAGCATTCTAAGGAACTACTGGTAA
TATTATAATGGAGGAAAGTT

Downstream 100 bases:

>100_bases
TTTTTTATTGATGACTAGCTATTATCACGGTTAAGGTGGCATTTCATTAAATATGGAATAAAGAAGTTTGGAAGACATTA
AATTCTAAACTTCTTTATTT

Product: beta-glucosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MTIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLLGIDFYHKYKEDITLFSEMGFNVFR
TSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYK
DKVKYWLTFNEVNSVLELPFTSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNP
KDVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSFSYYMSVTQSALPTQYNSGEG
NIIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPLFIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVA
EALQDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK

Sequences:

>Translated_471_residues
MTIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLLGIDFYHKYKEDITLFSEMGFNVFR
TSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYK
DKVKYWLTFNEVNSVLELPFTSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNP
KDVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSFSYYMSVTQSALPTQYNSGEG
NIIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPLFIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVA
EALQDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK
>Mature_470_residues
TIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLLGIDFYHKYKEDITLFSEMGFNVFRT
SIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPLVTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYKD
KVKYWLTFNEVNSVLELPFTSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNPK
DVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSFSYYMSVTQSALPTQYNSGEGN
IIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPLFIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVAE
ALQDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK

Specific function: Can Hydrolyze Salicin And Arbutin. [C]

COG id: COG2723

COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 1 family [H]

Homologues:

Organism=Homo sapiens, GI110681710, Length=487, Percent_Identity=31.4168377823409, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI32481206, Length=483, Percent_Identity=27.7432712215321, Blast_Score=178, Evalue=9e-45,
Organism=Homo sapiens, GI28376633, Length=479, Percent_Identity=29.2275574112735, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI13273313, Length=485, Percent_Identity=27.0103092783505, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI24497614, Length=481, Percent_Identity=25.5717255717256, Blast_Score=132, Evalue=1e-30,
Organism=Escherichia coli, GI2367270, Length=472, Percent_Identity=54.2372881355932, Blast_Score=519, Evalue=1e-148,
Organism=Escherichia coli, GI1789070, Length=478, Percent_Identity=51.0460251046025, Blast_Score=511, Evalue=1e-146,
Organism=Escherichia coli, GI2367174, Length=485, Percent_Identity=49.0721649484536, Blast_Score=478, Evalue=1e-136,
Organism=Caenorhabditis elegans, GI17539390, Length=477, Percent_Identity=29.979035639413, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17552856, Length=455, Percent_Identity=29.4505494505495, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI21356577, Length=469, Percent_Identity=29.637526652452, Blast_Score=153, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001360
- InterPro:   IPR018120
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00232 Glyco_hydro_1 [H]

EC number: =3.2.1.86 [H]

Molecular weight: Translated: 54436; Mature: 54305

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLLGIDF
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHH
YHKYKEDITLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
VTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYKDKVKYWLTFNEVNSVLELPF
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHEECCC
TSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNP
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC
KDVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSF
CCCEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
SYYMSVTQSALPTQYNSGEGNIIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPL
HHHHHHHHHHCCCCCCCCCCCEEECHHCCHHCCCCCCEEECCHHHHHHHHHHCCCCCCEE
FIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVAEALQDGVEIMGYTSWGCIDC
EEEECCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
VSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
TIFPDDFLWGGAVAANQVEGAYNEDGKGLSVQDVLPKGGLGEATENPTEDNLKLLGIDF
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEHH
YHKYKEDITLFSEMGFNVFRTSIAWSRIFPKGDEEEPNEAGLKYYDELFDELHAHGIEPL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
VTLSHYETPLYLARKYHGWIDRRMIHFYEKFARTVLERYKDKVKYWLTFNEVNSVLELPF
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHEECCC
TSGGIDIPKENLSKQELYQAIHHELVASSLVTKIAREINSEFKVGCMVLAMPAYPMTPNP
CCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC
KDVWATHEYENLNYLFSDVHVRGYYPNYAKRYFKEHDINIEFAAEDAELLKNYTVDFLSF
CCCEECCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHH
SYYMSVTQSALPTQYNSGEGNIIGGLVNPYLESSEWGWQIDPIGLRIILNRYYDRYQIPL
HHHHHHHHHHCCCCCCCCCCCEEECHHCCHHCCCCCCEEECCHHHHHHHHHHCCCCCCEE
FIVENGLGAKDQLIKDEFNNLTVQDDYRIQYMKEHLLQVAEALQDGVEIMGYTSWGCIDC
EEEECCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHH
VSMSTAQLSKRYGLIYVDRNDDGNGTFNRYKKMSFTWYKGVIESNGESLFK
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA