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The map label for this gene is 169833409

Identifier: 169833409

GI number: 169833409

Start: 1169130

End: 1170215

Strand: Direct

Name: 169833409

Synonym: SPH_1258

Alternate gene names: NA

Gene position: 1169130-1170215 (Clockwise)

Preceding gene: 169832556

Following gene: 169833756

Centisome position: 52.06

GC content: 34.53

Gene sequence:

>1086_bases
ATGGAAATAGAAGAATGTAAGCAAATTTCAATTCTTGATGTAGCCAATCGTTTAGGTATCTCCTTTAAACAAGTTTCGAG
CAGTGTCTATGAACATCATGAACATGATTCATTTCGGATTTTTTCAACTACCAATACTTTTAAATGGTTTTCAAGAGATA
TTCAAGGTGATGTCATTGATTTTGTTCGACTTGTTAAGGGAATTTCCTTTAAAGAAGCTCTAGCCTTTCTTTCTGAAGAA
CCTTTTCAAAAAGAAGCTGTTCAAGAAAAAAGAGAGAGACCATTTTATTATCCTTTAAAGAGAGTAGAAGATTCTAACTG
TAGTCTGGCTAGATATTATTTAACAGAATGTAGAGGAATCTCAGAAGAAATCGTAAAAAAGATGATTCAACAAGGATTGA
TGGCACAAGCCAGTTGGAAAACAAATGAAACAGTTGAACCTGTTATTGTTTTTAAAAGCTTTGATCATCGTCACAAACTG
CAGGCAGCAAGTCTACAAGGGATTTATAAGAATCCCGCTCTTTCTAGAGAGAGGTTAAAAACGATTCTAAAAGGAAGCCA
TGGACATATTGGAATATCCTTTGACATTGGTAAACCAAATAGACTGGTCTTTTGTGAATCGTTTATCGACTTGATGAGCT
ATTACGAACTTCATCAACAAAGTCTATCAGATGTTCGCTTGGTATCTATGGAGGGATTAAAAAGGTCTGTTGTCGCTTAT
CAAACTTTACGACTGATAGCTGAAGAAAATCAGAAGTTGGAATTCTTAGATACAGTAATACCTTCAAAGTTATTGCCTTT
GATCAATACAATTCGTGATACCACCAGCTATTTTGATAATCATCCTGATTTATTGACACTGGCAGTAGATTGTGATGATG
CAGGTAAAGATTTTTCTGATAAGTTATCTAGATCAGGATTTCCTGTTTTACTGGATTTGCCTGATAATGAAACTGGGAAA
GAAAAAAGAGACTGGAACGATATTCTTCGAGAAAAGAAATCAGATTTACAATTGATGATCGAAACTGCAAAAGAGACATT
GAGGAATCAACCAGTAAGGCAAACCTCTCAATGTTTAGAATTGTGA

Upstream 100 bases:

>100_bases
ATCTGGGTTAGATGATTTAGATAAGGCAACTCCCAAAACTTTAGAAGAATCATCATCAATACCATCACTGCCAAATACTA
CGACAAAATGATGATATTGC

Downstream 100 bases:

>100_bases
TAACAAAATCAAGATGTTTTAGCTAATATTAGAATGAAGGAGGATCGTACATGACCATAATCGAACGCTTAGAAGAAAAG
GTCACTAGGCAAGAAAGTAA

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MEIEECKQISILDVANRLGISFKQVSSSVYEHHEHDSFRIFSTTNTFKWFSRDIQGDVIDFVRLVKGISFKEALAFLSEE
PFQKEAVQEKRERPFYYPLKRVEDSNCSLARYYLTECRGISEEIVKKMIQQGLMAQASWKTNETVEPVIVFKSFDHRHKL
QAASLQGIYKNPALSRERLKTILKGSHGHIGISFDIGKPNRLVFCESFIDLMSYYELHQQSLSDVRLVSMEGLKRSVVAY
QTLRLIAEENQKLEFLDTVIPSKLLPLINTIRDTTSYFDNHPDLLTLAVDCDDAGKDFSDKLSRSGFPVLLDLPDNETGK
EKRDWNDILREKKSDLQLMIETAKETLRNQPVRQTSQCLEL

Sequences:

>Translated_361_residues
MEIEECKQISILDVANRLGISFKQVSSSVYEHHEHDSFRIFSTTNTFKWFSRDIQGDVIDFVRLVKGISFKEALAFLSEE
PFQKEAVQEKRERPFYYPLKRVEDSNCSLARYYLTECRGISEEIVKKMIQQGLMAQASWKTNETVEPVIVFKSFDHRHKL
QAASLQGIYKNPALSRERLKTILKGSHGHIGISFDIGKPNRLVFCESFIDLMSYYELHQQSLSDVRLVSMEGLKRSVVAY
QTLRLIAEENQKLEFLDTVIPSKLLPLINTIRDTTSYFDNHPDLLTLAVDCDDAGKDFSDKLSRSGFPVLLDLPDNETGK
EKRDWNDILREKKSDLQLMIETAKETLRNQPVRQTSQCLEL
>Mature_361_residues
MEIEECKQISILDVANRLGISFKQVSSSVYEHHEHDSFRIFSTTNTFKWFSRDIQGDVIDFVRLVKGISFKEALAFLSEE
PFQKEAVQEKRERPFYYPLKRVEDSNCSLARYYLTECRGISEEIVKKMIQQGLMAQASWKTNETVEPVIVFKSFDHRHKL
QAASLQGIYKNPALSRERLKTILKGSHGHIGISFDIGKPNRLVFCESFIDLMSYYELHQQSLSDVRLVSMEGLKRSVVAY
QTLRLIAEENQKLEFLDTVIPSKLLPLINTIRDTTSYFDNHPDLLTLAVDCDDAGKDFSDKLSRSGFPVLLDLPDNETGK
EKRDWNDILREKKSDLQLMIETAKETLRNQPVRQTSQCLEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41713; Mature: 41713

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEECKQISILDVANRLGISFKQVSSSVYEHHEHDSFRIFSTTNTFKWFSRDIQGDVID
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCHHHH
FVRLVKGISFKEALAFLSEEPFQKEAVQEKRERPFYYPLKRVEDSNCSLARYYLTECRGI
HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCC
SEEIVKKMIQQGLMAQASWKTNETVEPVIVFKSFDHRHKLQAASLQGIYKNPALSRERLK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHH
TILKGSHGHIGISFDIGKPNRLVFCESFIDLMSYYELHQQSLSDVRLVSMEGLKRSVVAY
HHHCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLRLIAEENQKLEFLDTVIPSKLLPLINTIRDTTSYFDNHPDLLTLAVDCDDAGKDFSD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
KLSRSGFPVLLDLPDNETGKEKRDWNDILREKKSDLQLMIETAKETLRNQPVRQTSQCLE
HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
L
C
>Mature Secondary Structure
MEIEECKQISILDVANRLGISFKQVSSSVYEHHEHDSFRIFSTTNTFKWFSRDIQGDVID
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCHHHH
FVRLVKGISFKEALAFLSEEPFQKEAVQEKRERPFYYPLKRVEDSNCSLARYYLTECRGI
HHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCC
SEEIVKKMIQQGLMAQASWKTNETVEPVIVFKSFDHRHKLQAASLQGIYKNPALSRERLK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHH
TILKGSHGHIGISFDIGKPNRLVFCESFIDLMSYYELHQQSLSDVRLVSMEGLKRSVVAY
HHHCCCCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLRLIAEENQKLEFLDTVIPSKLLPLINTIRDTTSYFDNHPDLLTLAVDCDDAGKDFSD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHH
KLSRSGFPVLLDLPDNETGKEKRDWNDILREKKSDLQLMIETAKETLRNQPVRQTSQCLE
HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10475962; 12004073 [H]