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The map label for this gene is pvaA [H]

Identifier: 169833096

GI number: 169833096

Start: 1038866

End: 1039480

Strand: Direct

Name: pvaA [H]

Synonym: SPH_1129

Alternate gene names: 169833096

Gene position: 1038866-1039480 (Clockwise)

Preceding gene: 169833494

Following gene: 169832636

Centisome position: 46.26

GC content: 41.46

Gene sequence:

>615_bases
ATGTTTAAACGAATTCGAAGAGTGCTTGTACTAGCAGTCTTCCTTTTTGCTGGCTATAAAGCTTACCGCGTTCATCAAGA
TGTCAAACAAGTCATGACCTATCAACCCATGGTGCGAGAAATCTTGAGTGAAAAAGACACCCCAGCAAACGAAGAGCTTG
TGCTTGCTATGATTTATACTGAAACAAAAGGAAAAGAAGGCGATGTTATGCAGTCTAGTGAGTCTGCAAGTGGTTCCACC
AACACCATCAATGATAATGCCTCTAGCATTCGGCAAGGCATTCAAACTCTGACAGGCAATCTCTATCTGGCGCAGAAGAA
GGGTGTAGATATCTGGACAGCTGTTCAAGCCTATAATTTTGGACCTGCCTATATCGATTTTATCGCCCAAAATGGCAAGG
AAAATACCTTGGCTCTAGCCAAACAGTACTCTCGTGAGACTGTTGCCCCCTTGCTTGGTAATACGACTGGAAAGACTTAT
AGTTATATTCACCCCATTTCCATTTTTCACGGTGCTGAACTCTATGTAAATGGAGGAAACTATTATTATTCTAGACAGGT
ACGACTTAACCTTTACATAATCAAATGTTTCACTCTCTTTTCAACATCTGGCTAG

Upstream 100 bases:

>100_bases
ATAACGTCTATCAAGACGCCGAGTCTGTTGAGTTTATCCAAAACGAAAATGGAACCTACTCTATCTTAATCAAAAATATC
GAGGATATCCAAAGTAAATA

Downstream 100 bases:

>100_bases
ACCAGGTGTTTTTGTTATAAGTTTTCTTTAAGATAGATATATTACTATAAAGAAGTAAAGGAGGAAATTCCCTATGAGAA
AGAAACTCTTTCTGACTAGT

Product: pneumococcal vaccine antigen A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREILSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNTTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG

Sequences:

>Translated_204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREILSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNTTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG
>Mature_204_residues
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREILSEKDTPANEELVLAMIYTETKGKEGDVMQSSESASGST
NTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNFGPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNTTGKTY
SYIHPISIFHGAELYVNGGNYYYSRQVRLNLYIIKCFTLFSTSG

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell surface (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22915; Mature: 22915

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREILSEKDTPANEELVLAMIYT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
ETKGKEGDVMQSSESASGSTNTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHCCC
GPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNTTGKTYSYIHPISIFHGAELYVNGGN
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCEEEEECCC
YYYSRQVRLNLYIIKCFTLFSTSG
EEEEEEEEEEEEEEEEEEHHCCCC
>Mature Secondary Structure
MFKRIRRVLVLAVFLFAGYKAYRVHQDVKQVMTYQPMVREILSEKDTPANEELVLAMIYT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
ETKGKEGDVMQSSESASGSTNTINDNASSIRQGIQTLTGNLYLAQKKGVDIWTAVQAYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHCCC
GPAYIDFIAQNGKENTLALAKQYSRETVAPLLGNTTGKTYSYIHPISIFHGAELYVNGGN
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCEEEEECCC
YYYSRQVRLNLYIIKCFTLFSTSG
EEEEEEEEEEEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179332; 11463916 [H]