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The map label for this gene is yizB [H]

Identifier: 169833060

GI number: 169833060

Start: 824372

End: 824692

Strand: Direct

Name: yizB [H]

Synonym: SPH_0890

Alternate gene names: 169833060

Gene position: 824372-824692 (Clockwise)

Preceding gene: 169833548

Following gene: 169833654

Centisome position: 36.71

GC content: 40.81

Gene sequence:

>321_bases
ATGAAAGAAACTCAGCTATTAAAAGGTGTTCTTGAAGGTTGTGTCTTGGATATGATTGGTCAAAAAGAGCGGTATGGTTA
TGAGTTGGTTCAGACTTTGCGAGAGGCTGGATTTGATACTATCGTTCCAGGAACTATTTATCCTTTGTTGCAAAAGTTAG
AAAAAAATCAATGGATAAGAGGCGACATGCGCCCGTCGCCAGATGGTCCAGATCGGAAGTATTTTTCATTAACGAAAGAA
GGAGAAGAGCGTGTCTCAGTCTTTTGGCAGCAATGGGACGATTTGAGTCAAAAAGTAGAAGGGATTAAGAATGGGGGTTA
A

Upstream 100 bases:

>100_bases
AAGAGTATTAACTATTATGCTTTACAAACTAGTGTAGAAGTGATATACTATAGGTGAAGTTACTAGTAGGTATTACAAAA
TAGATTAGAAGGGAGAAGTG

Downstream 100 bases:

>100_bases
ACCATGAAGAAAATGAAGTATTACGAAGAAACAAGCGCTTTGCTACATGAGTTTTCTGAGGAGAATCAAAAGTATTTTGA
GGAGTTGTGGGAAAGTTTTA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKETQLLKGVLEGCVLDMIGQKERYGYELVQTLREAGFDTIVPGTIYPLLQKLEKNQWIRGDMRPSPDGPDRKYFSLTKE
GEERVSVFWQQWDDLSQKVEGIKNGG

Sequences:

>Translated_106_residues
MKETQLLKGVLEGCVLDMIGQKERYGYELVQTLREAGFDTIVPGTIYPLLQKLEKNQWIRGDMRPSPDGPDRKYFSLTKE
GEERVSVFWQQWDDLSQKVEGIKNGG
>Mature_106_residues
MKETQLLKGVLEGCVLDMIGQKERYGYELVQTLREAGFDTIVPGTIYPLLQKLEKNQWIRGDMRPSPDGPDRKYFSLTKE
GEERVSVFWQQWDDLSQKVEGIKNGG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12208; Mature: 12208

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETQLLKGVLEGCVLDMIGQKERYGYELVQTLREAGFDTIVPGTIYPLLQKLEKNQWIR
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
GDMRPSPDGPDRKYFSLTKEGEERVSVFWQQWDDLSQKVEGIKNGG
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKETQLLKGVLEGCVLDMIGQKERYGYELVQTLREAGFDTIVPGTIYPLLQKLEKNQWIR
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
GDMRPSPDGPDRKYFSLTKEGEERVSVFWQQWDDLSQKVEGIKNGG
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]