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The map label for this gene is deoD [H]

Identifier: 169832618

GI number: 169832618

Start: 862820

End: 863530

Strand: Direct

Name: deoD [H]

Synonym: SPH_0934

Alternate gene names: 169832618

Gene position: 862820-863530 (Clockwise)

Preceding gene: 169833092

Following gene: 169834188

Centisome position: 38.42

GC content: 42.19

Gene sequence:

>711_bases
ATGTCTATCCATATTGCTGCTCAGCAGGGTGAAATTGCTGATAAAATTCTTCTTCCTGGGGATCCTCTTCGTGCTAAGTT
TATTGCGGAGAATTTCCTTGATGATGCTGTTTGTTTTAACGAAGTGCGTAACATGTTTGGTTACACTGGTACTTACAAGG
GTCACTGTGTATCTGTCATGGGAACTGGGATGGGAATGCCATCTATTTCGATTTATGCGCGTGAGTTAATCGTAGACTAC
GGTGTGAAGAAATTGATTCGTGTGGGAACTGCAGGTTCTTTGAATGAAGAGGTTCATGTTCGTGAATTAGTTTTGGCGCA
GGCGGCTGCAACCAACTCAAACATCGTTCGTAATGACTGGCCACAGTACGATTTTCCACAAATTGCTAGCTTTGATTTGC
TTGATAAAGCCTACCATATCGCCAAAGAACTTGGTATGACTACTCACGTTGGGAACGTTTTGTCATCTGATGTCTTTTAC
TCAAATTACTTTGAAAAGAATATCGAGCTTGGTAAATGGGGAGTCAAGGCTGTGGAAATGGAAGCAGCAGCTCTTTACTA
TCTTGCTGCCCAATACCATGTTGATGCGCTAGCTATCATGACCATCTCTGATAGCTTGGTCAATCCAGACGAAGACACAA
CTGCAGAAGAACGTCAAAATACCTTCACTGATATGATGAAGGTTGGTTTGGAAACCTTGATTGCAGAATAA

Upstream 100 bases:

>100_bases
CGGAAAACTCGGAAAATAGATAATCTGACTGAAAAATCAGGATTTCTCGTCAGGTTCCTAATTTTCAGTCGTTTTCTTCT
CGCTCTTTGTATCATAAATT

Downstream 100 bases:

>100_bases
TTATAGCCAAAAAGGAAGCCCTTTATGAATTGTAGGACTTCCTTTTCTTATCCAGAAATTGATCTAGCTCTCTCTGATTT
CGAAGAATAGTGACTTTATG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLDDAVCFNEVRNMFGYTGTYKGHCVSVMGTGMGMPSISIYARELIVDY
GVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFY
SNYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE

Sequences:

>Translated_236_residues
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLDDAVCFNEVRNMFGYTGTYKGHCVSVMGTGMGMPSISIYARELIVDY
GVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFY
SNYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
>Mature_235_residues
SIHIAAQQGEIADKILLPGDPLRAKFIAENFLDDAVCFNEVRNMFGYTGTYKGHCVSVMGTGMGMPSISIYARELIVDYG
VKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDWPQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYS
NYFEKNIELGKWGVKAVEMEAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=231, Percent_Identity=50.2164502164502, Blast_Score=234, Evalue=3e-63,
Organism=Escherichia coli, GI1790265, Length=196, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 26131; Mature: 26000

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHIAAQQGEIADKILLPGDPLRAKFIAENFLDDAVCFNEVRNMFGYTGTYKGHCVSVM
CEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDW
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEM
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
HHHHHHHHHHHHHHHEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIHIAAQQGEIADKILLPGDPLRAKFIAENFLDDAVCFNEVRNMFGYTGTYKGHCVSVM
EEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGMPSISIYARELIVDYGVKKLIRVGTAGSLNEEVHVRELVLAQAAATNSNIVRNDW
ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PQYDFPQIASFDLLDKAYHIAKELGMTTHVGNVLSSDVFYSNYFEKNIELGKWGVKAVEM
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAAALYYLAAQYHVDALAIMTISDSLVNPDEDTTAEERQNTFTDMMKVGLETLIAE
HHHHHHHHHHHHHHHEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA