| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is 169832564
Identifier: 169832564
GI number: 169832564
Start: 86486
End: 87967
Strand: Direct
Name: 169832564
Synonym: SPH_0114
Alternate gene names: NA
Gene position: 86486-87967 (Clockwise)
Preceding gene: 169833179
Following gene: 169834108
Centisome position: 3.85
GC content: 37.38
Gene sequence:
>1482_bases ATGTCTAAATTCTTTCGTATAACAGATATTATCCGCCCTATCGGGAACAAGAGGAGCGTATCAACTGATAACGCTCCCTT ATTGGGCGTGAATATCCAACAGGTTAAGATTGGAGAAAAAGAGCATATCATAAAATTTGACATCAAAACCACAAATGCAA TTGAAATGGAACAATTAAAGCATGATTTGGCAGGCATTCTAAACGTTTTAGAGCCAGTAAAGATTACTTATGGCGATGAG CCAGACAAATACTATATGGGGTTGCCGGTAGATGAGATTACTCCAGAAAATTTGACAAGATGGTTCCAGCGCTCAGAGTT AAAAATAATAATTCCTGATGGCGTGGCTCACAGCACGACTTTAAAAAATTTTGATATCGATACAAATGAAACAAGCGCAC CGGATAGGATAGTATTTAATTTAACAAATACAGGAACAGAGCCAGCTTATCCAATTATTAGAATTAAACACAACTCAGAG AATGGATATATTGGAGTTGTTAACAACAGAGCGGCGTTTGAATTAGGAAATCGTGAAGAGGTTGATACTGAAAAATACAG AGACTCTGAAACATTGATAGATTATAGAGGGACTAATATTCTAAAAGGATTTCAAAATGGCACTAAAGGAGTAGCTGTAA CAAATGATAATAAGGAGCGTCTTGTTGGCACTTTGAGTACAACAAGTATGTGGGGGCGTAATCATATCGAATTATCAAAC CGTGGTACAGTTGAAAAAAATCGAAATAATGCACAAAGTTTGACATGGGCTATTCCTGTTGATAGTAGTGGAGAAGTTGG TTCATTGAATGACTATCTGCTTTGGAGACAAGTTTTTATGGCAGCAGTCGCTAATCAATATGGTTTCATAAAGGTTACTG TATCGGATACAGACGGCAATTTCTTGTATGGGGTGGAAACTTACAAACGCTATCAGACACTTGATTGTGAGTATAGTTTT TTCACCACTGACGGCAAAGGTGGATACAAGTTTATCAAATGGTGGTATTTTACTGGGACAGGGGCTCAAGTAGGCAAACT TGATCCATTTAGCGCGGAAAAGGGCTGGTCAGAGTTAAAAAGAAACGATGATAGAGTTCAAGTGTTTTTTGATGGCTCTC ATTATGACTTTATTATTCCGGAGATAAAAGACAAAAAATCAGCAAAAATCCATATCACGCTTGGAGCACTCAGAGACTGG CCTCTTGTATCACATATGTATGTTGATGAGTTCATGTATAGAAAAGACTTTGTGACAAAGAGTAGAGATATTCCTAATCG CTATCCAATAGGTTCAAATGTTGTAATCAACAGTGAGGACGATAGTGTGTATATTGACGGGATATCTAAAGTAAGCGAAG TTGTAGACGGTTCACATTGGCCAGTAATTCCTCCAGGAAAATCTCAACTAGAGTTGTATTTTTCACGTTTTGTTAAGAAA AAACCAACAGTGACAATTGAATTCGAAGAAAGGTGGCTATAA
Upstream 100 bases:
>100_bases GCGATAAATTTGCTAAATATCAATCGGAACAACTAAGACGAGATAATAGGATGAAAGGGGTATTGTCATGACAAAGATAA TGACTTTCAACGGAGTTGAT
Downstream 100 bases:
>100_bases GATGCTTTTAACAATTCATGATGCAAACTTACAAAAGGTGGCATTTATTGATAACGAAAAACAAGGTACGTTAAATTATT ACGATGATACTTGGACAAGA
Product: tail protein
Products: NA
Alternate protein names: Prophage; Phage Tail Component; Prophage Pi3 Protein
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSKFFRITDIIRPIGNKRSVSTDNAPLLGVNIQQVKIGEKEHIIKFDIKTTNAIEMEQLKHDLAGILNVLEPVKITYGDE PDKYYMGLPVDEITPENLTRWFQRSELKIIIPDGVAHSTTLKNFDIDTNETSAPDRIVFNLTNTGTEPAYPIIRIKHNSE NGYIGVVNNRAAFELGNREEVDTEKYRDSETLIDYRGTNILKGFQNGTKGVAVTNDNKERLVGTLSTTSMWGRNHIELSN RGTVEKNRNNAQSLTWAIPVDSSGEVGSLNDYLLWRQVFMAAVANQYGFIKVTVSDTDGNFLYGVETYKRYQTLDCEYSF FTTDGKGGYKFIKWWYFTGTGAQVGKLDPFSAEKGWSELKRNDDRVQVFFDGSHYDFIIPEIKDKKSAKIHITLGALRDW PLVSHMYVDEFMYRKDFVTKSRDIPNRYPIGSNVVINSEDDSVYIDGISKVSEVVDGSHWPVIPPGKSQLELYFSRFVKK KPTVTIEFEERWL
Sequences:
>Translated_493_residues MSKFFRITDIIRPIGNKRSVSTDNAPLLGVNIQQVKIGEKEHIIKFDIKTTNAIEMEQLKHDLAGILNVLEPVKITYGDE PDKYYMGLPVDEITPENLTRWFQRSELKIIIPDGVAHSTTLKNFDIDTNETSAPDRIVFNLTNTGTEPAYPIIRIKHNSE NGYIGVVNNRAAFELGNREEVDTEKYRDSETLIDYRGTNILKGFQNGTKGVAVTNDNKERLVGTLSTTSMWGRNHIELSN RGTVEKNRNNAQSLTWAIPVDSSGEVGSLNDYLLWRQVFMAAVANQYGFIKVTVSDTDGNFLYGVETYKRYQTLDCEYSF FTTDGKGGYKFIKWWYFTGTGAQVGKLDPFSAEKGWSELKRNDDRVQVFFDGSHYDFIIPEIKDKKSAKIHITLGALRDW PLVSHMYVDEFMYRKDFVTKSRDIPNRYPIGSNVVINSEDDSVYIDGISKVSEVVDGSHWPVIPPGKSQLELYFSRFVKK KPTVTIEFEERWL >Mature_492_residues SKFFRITDIIRPIGNKRSVSTDNAPLLGVNIQQVKIGEKEHIIKFDIKTTNAIEMEQLKHDLAGILNVLEPVKITYGDEP DKYYMGLPVDEITPENLTRWFQRSELKIIIPDGVAHSTTLKNFDIDTNETSAPDRIVFNLTNTGTEPAYPIIRIKHNSEN GYIGVVNNRAAFELGNREEVDTEKYRDSETLIDYRGTNILKGFQNGTKGVAVTNDNKERLVGTLSTTSMWGRNHIELSNR GTVEKNRNNAQSLTWAIPVDSSGEVGSLNDYLLWRQVFMAAVANQYGFIKVTVSDTDGNFLYGVETYKRYQTLDCEYSFF TTDGKGGYKFIKWWYFTGTGAQVGKLDPFSAEKGWSELKRNDDRVQVFFDGSHYDFIIPEIKDKKSAKIHITLGALRDWP LVSHMYVDEFMYRKDFVTKSRDIPNRYPIGSNVVINSEDDSVYIDGISKVSEVVDGSHWPVIPPGKSQLELYFSRFVKKK PTVTIEFEERWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56295; Mature: 56164
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKFFRITDIIRPIGNKRSVSTDNAPLLGVNIQQVKIGEKEHIIKFDIKTTNAIEMEQLK CCCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEEECCCCCEEEEEECCCCCHHHHHHH HDLAGILNVLEPVKITYGDEPDKYYMGLPVDEITPENLTRWFQRSELKIIIPDGVAHSTT HHHHHHHHHHCCEEEEECCCCCCEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCE LKNFDIDTNETSAPDRIVFNLTNTGTEPAYPIIRIKHNSENGYIGVVNNRAAFELGNREE EECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCC VDTEKYRDSETLIDYRGTNILKGFQNGTKGVAVTNDNKERLVGTLSTTSMWGRNHIELSN CCHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEECCCHHHEEEEEEHHCCCCCCEEEECC RGTVEKNRNNAQSLTWAIPVDSSGEVGSLNDYLLWRQVFMAAVANQYGFIKVTVSDTDGN CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC FLYGVETYKRYQTLDCEYSFFTTDGKGGYKFIKWWYFTGTGAQVGKLDPFSAEKGWSELK EEEEEHHHHHEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHH RNDDRVQVFFDGSHYDFIIPEIKDKKSAKIHITLGALRDWPLVSHMYVDEFMYRKDFVTK CCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SRDIPNRYPIGSNVVINSEDDSVYIDGISKVSEVVDGSHWPVIPPGKSQLELYFSRFVKK CCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC KPTVTIEFEERWL CCCEEEEECCCCC >Mature Secondary Structure SKFFRITDIIRPIGNKRSVSTDNAPLLGVNIQQVKIGEKEHIIKFDIKTTNAIEMEQLK CCCHHHHHHHHCCCCCCCCCCCCCCEEECEEEEEEECCCCCEEEEEECCCCCHHHHHHH HDLAGILNVLEPVKITYGDEPDKYYMGLPVDEITPENLTRWFQRSELKIIIPDGVAHSTT HHHHHHHHHHCCEEEEECCCCCCEEECCCHHHCCHHHHHHHHHCCCCEEEECCCCCCCCE LKNFDIDTNETSAPDRIVFNLTNTGTEPAYPIIRIKHNSENGYIGVVNNRAAFELGNREE EECCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEECCCCCC VDTEKYRDSETLIDYRGTNILKGFQNGTKGVAVTNDNKERLVGTLSTTSMWGRNHIELSN CCHHHHCCCCEEEEECCCHHHHHHCCCCCCEEEECCCHHHEEEEEEHHCCCCCCEEEECC RGTVEKNRNNAQSLTWAIPVDSSGEVGSLNDYLLWRQVFMAAVANQYGFIKVTVSDTDGN CCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC FLYGVETYKRYQTLDCEYSFFTTDGKGGYKFIKWWYFTGTGAQVGKLDPFSAEKGWSELK EEEEEHHHHHEEEECCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHH RNDDRVQVFFDGSHYDFIIPEIKDKKSAKIHITLGALRDWPLVSHMYVDEFMYRKDFVTK CCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC SRDIPNRYPIGSNVVINSEDDSVYIDGISKVSEVVDGSHWPVIPPGKSQLELYFSRFVKK CCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCC KPTVTIEFEERWL CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA