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The map label for this gene is lytB [H]

Identifier: 169832510

GI number: 169832510

Start: 717710

End: 718636

Strand: Direct

Name: lytB [H]

Synonym: SPH_0762

Alternate gene names: 169832510

Gene position: 717710-718636 (Clockwise)

Preceding gene: 169833258

Following gene: 169834049

Centisome position: 31.96

GC content: 39.05

Gene sequence:

>927_bases
ATGAATAAACGTCTATTTTTAAAAATGAGTCTGGTGACGTTGCCAATTTTAGCCTTGTTTTCACAACCAGTTTTGGCGGA
AGAAAACATCCATTTTTCGAGCTGTAAGGAAGCTTGGGCGAATGGCTATTCGGATATTCACGAGGGGGAACCTGGTTATT
CTGCCAAGTTAGACCGTGATCATGATGGTGTGGCTTGCGAATTGAAAAATGCTCCTAAGGGTGCTTTTAAAGCAAAACAG
TCAACGGCTATTCAAATCAACACAAGTTCAGCAACAACAAGTGGTTGGGTTAAGCAGGACGGCGCTTGGTACTACTTTGA
TGGAAATGGAAATCTAGTGAAAAATGCATGGCAGGGAAGCTATTACCTGAAAGCTGATGGTAAAATGGCACAGAGTGAAT
GGATTTATGACTCTTCTTATCAAGCTTGGTATTATTTGAAATCAGATGGTTCTTATGCAAAAAATGCATGGCAAGGAGCT
TATTACCTTAAATCAAACGGTAAAATGGCACAAGGTGAGTGGGTTTATGATTCTTCTTACCAAGCATGGTATTACTTGAA
ATCAGATGGTTCATATGCTCGCAATGCATGGCAAGGAAACTACTATTTGAAATCAGATGGTAAAATGGCTAAAGGTGAAT
GGGTTTATGATGCCACCTATCAAGCTTGGTATTATTTGACATCAGATGGTTCTTATGCTTACAGTACATGGCAAGGAAAT
TACTATCTAAAATCGGATGGTAAAATGGCTGTCAATGAATGGGTTGATGGTGGACGTTATTATGTTGGCGCTGACGGAGT
TTGGAAGGAAGGTCAAGCAAGTACAGCTTCTTCTAGTAATGATAGCAATAGTGAATATTCTGCTGCTTTAGGAAAGGCAA
AAAGTTATAATTCGTTATTCCACATGTCAAAAAAAACGTATGTATAG

Upstream 100 bases:

>100_bases
CCAAAGGAGTTTGTAGAAAAGACCAGAAGTTTCCTTGAATTGCTGAAATAAGTTTGATAAAATAATATTGAAATCGATAT
CATAATTATGGGAGAAAGAA

Downstream 100 bases:

>100_bases
ACAATTAACTTCTGATTTTGATAAATTTTCAAATGATGCAGCTCAATATGCCATTGATCATTAGATGATTAACAGATACT
GGTAGGCGAAAAAATTCCTT

Product: Excalibur domain-containing protein

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNKRLFLKMSLVTLPILALFSQPVLAEENIHFSSCKEAWANGYSDIHEGEPGYSAKLDRDHDGVACELKNAPKGAFKAKQ
STAIQINTSSATTSGWVKQDGAWYYFDGNGNLVKNAWQGSYYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGA
YYLKSNGKMAQGEWVYDSSYQAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGSYAYSTWQGN
YYLKSDGKMAVNEWVDGGRYYVGADGVWKEGQASTASSSNDSNSEYSAALGKAKSYNSLFHMSKKTYV

Sequences:

>Translated_308_residues
MNKRLFLKMSLVTLPILALFSQPVLAEENIHFSSCKEAWANGYSDIHEGEPGYSAKLDRDHDGVACELKNAPKGAFKAKQ
STAIQINTSSATTSGWVKQDGAWYYFDGNGNLVKNAWQGSYYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGA
YYLKSNGKMAQGEWVYDSSYQAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGSYAYSTWQGN
YYLKSDGKMAVNEWVDGGRYYVGADGVWKEGQASTASSSNDSNSEYSAALGKAKSYNSLFHMSKKTYV
>Mature_308_residues
MNKRLFLKMSLVTLPILALFSQPVLAEENIHFSSCKEAWANGYSDIHEGEPGYSAKLDRDHDGVACELKNAPKGAFKAKQ
STAIQINTSSATTSGWVKQDGAWYYFDGNGNLVKNAWQGSYYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGA
YYLKSNGKMAQGEWVYDSSYQAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGSYAYSTWQGN
YYLKSDGKMAVNEWVDGGRYYVGADGVWKEGQASTASSSNDSNSEYSAALGKAKSYNSLFHMSKKTYV

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG5263

COG function: function code R; FOG: Glucan-binding domain (YG repeat)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 34759; Mature: 34759

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRLFLKMSLVTLPILALFSQPVLAEENIHFSSCKEAWANGYSDIHEGEPGYSAKLDRD
CCCEEEEEEHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHCCCCCCCEECCCC
HDGVACELKNAPKGAFKAKQSTAIQINTSSATTSGWVKQDGAWYYFDGNGNLVKNAWQGS
CCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCEEEEECCCE
YYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGAYYLKSNGKMAQGEWVYDSSY
EEEEECCCCCCCCEEECCCCEEEEEEECCCCCCHHCCCCEEEEECCCCEECCCEEEECCC
QAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGSYAYSTWQGN
EEEEEEECCCCHHHCEECCCEEECCCCCEECCCEEEEEEEEEEEEEECCCCEEEEEECCC
YYLKSDGKMAVNEWVDGGRYYVGADGVWKEGQASTASSSNDSNSEYSAALGKAKSYNSLF
EEECCCCCEEEEHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH
HMSKKTYV
CCCCCCCC
>Mature Secondary Structure
MNKRLFLKMSLVTLPILALFSQPVLAEENIHFSSCKEAWANGYSDIHEGEPGYSAKLDRD
CCCEEEEEEHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCHHHCCCCCCCEECCCC
HDGVACELKNAPKGAFKAKQSTAIQINTSSATTSGWVKQDGAWYYFDGNGNLVKNAWQGS
CCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEECCCEEEEECCCCCEEEEECCCE
YYLKADGKMAQSEWIYDSSYQAWYYLKSDGSYAKNAWQGAYYLKSNGKMAQGEWVYDSSY
EEEEECCCCCCCCEEECCCCEEEEEEECCCCCCHHCCCCEEEEECCCCEECCCEEEECCC
QAWYYLKSDGSYARNAWQGNYYLKSDGKMAKGEWVYDATYQAWYYLTSDGSYAYSTWQGN
EEEEEEECCCCHHHCEECCCEEECCCCCEECCCEEEEEEEEEEEEEECCCCEEEEEECCC
YYLKSDGKMAVNEWVDGGRYYVGADGVWKEGQASTASSSNDSNSEYSAALGKAKSYNSLF
EEECCCCCEEEEHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH
HMSKKTYV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10096093; 11544234 [H]