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The map label for this gene is cpsB [H]

Identifier: 169832438

GI number: 169832438

Start: 406348

End: 407079

Strand: Direct

Name: cpsB [H]

Synonym: SPH_0456

Alternate gene names: 169832438

Gene position: 406348-407079 (Clockwise)

Preceding gene: 169833033

Following gene: 169833763

Centisome position: 18.1

GC content: 41.26

Gene sequence:

>732_bases
ATGATAGACATCCATTCGCATATCGTTTTTGATGTAGATGACGGTCCCAAGTCAAGAGAGGAAAGCAAGGCTCTCTTGGC
AGAATCCTATAGGCAGGGGGTGCGAACCATTGTCTCTACCTCTCACCGTCGCAAGGGCATGTTTGAAACTCCGGAAGAGA
AGATAGCAGAAAACTTTCTTCAGGTTCGGGAAATAGCTAAGGAAGTGGCGAGTGACTTGGTCATTGCTTACGGGGCTGAA
ATTTACTACACATCAGATGTTTTGGATAAGCTGGAAAAAAATCGGATTCCGACCCTCAATAATAGTCGTTATGCCTTGAT
AGAGTTTAGTATGAACACCCCTTATCGCGATATCCATAGTGCCTTGAGTAAAATATTGATGTTGGGAATTACTCCAGTCA
TTGCCCACATTGAGCGCTATGATGCACTTGAAAATAATGAAAAACGCGTTCGAGAGCTGATCAATATGGGCTGTTACACG
CAAGTAAATAGTTCACATGTCCTCAAATCCAAACTTTTTGGAGAACGTTATAAATTCATGAAAAAAAGAGCTCAGTATTT
TTTGGAGCGTGACTTGGTTCATATCATTGCAAGTGATATGCATAATGTGGACAGCAGACCTCCCCATATGGCAGAAGCAT
ATGACCTTGTTTCCCAAAAATACGGAGAAGCGAAGGCTCAGGAACTTTTTATAGATAATCCTCGAAAAATTGTAATGGAT
CAACTAATTTAG

Upstream 100 bases:

>100_bases
TATGCAATGCCAGACAGTAACCTCTATGTGCTGGAAATAGATGATAGTAGTTTAGCTGTAGTTAAAGCAGCTATACAGGA
TGTGATGGAGGGTAGATGAA

Downstream 100 bases:

>100_bases
GAGAAATGATGAAAGAACAAAACACGATAGAAATCGATGTATTTCAATTACTTAAAACCTTGTGGAAACACAAGCTAATA
ATTTTATTAGTGGCACTTGT

Product: tyrosine-protein phosphatase CpsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE
IYYTSDVLDKLEKNRIPTLNNSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELINMGCYT
QVNSSHVLKSKLFGERYKFMKKRAQYFLERDLVHIIASDMHNVDSRPPHMAEAYDLVSQKYGEAKAQELFIDNPRKIVMD
QLI

Sequences:

>Translated_243_residues
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE
IYYTSDVLDKLEKNRIPTLNNSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELINMGCYT
QVNSSHVLKSKLFGERYKFMKKRAQYFLERDLVHIIASDMHNVDSRPPHMAEAYDLVSQKYGEAKAQELFIDNPRKIVMD
QLI
>Mature_243_residues
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE
IYYTSDVLDKLEKNRIPTLNNSRYALIEFSMNTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELINMGCYT
QVNSSHVLKSKLFGERYKFMKKRAQYFLERDLVHIIASDMHNVDSRPPHMAEAYDLVSQKYGEAKAQELFIDNPRKIVMD
QLI

Specific function: Dephosphorylates CpsD. Involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 28140; Mature: 28140

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QVREIAKEVASDLVIAYGAEIYYTSDVLDKLEKNRIPTLNNSRYALIEFSMNTPYRDIHS
HHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH
ALSKILMLGITPVIAHIERYDALENNEKRVRELINMGCYTQVNSSHVLKSKLFGERYKFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KKRAQYFLERDLVHIIASDMHNVDSRPPHMAEAYDLVSQKYGEAKAQELFIDNPRKIVMD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHH
QLI
HCC
>Mature Secondary Structure
MIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
QVREIAKEVASDLVIAYGAEIYYTSDVLDKLEKNRIPTLNNSRYALIEFSMNTPYRDIHS
HHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHH
ALSKILMLGITPVIAHIERYDALENNEKRVRELINMGCYTQVNSSHVLKSKLFGERYKFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
KKRAQYFLERDLVHIIASDMHNVDSRPPHMAEAYDLVSQKYGEAKAQELFIDNPRKIVMD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHH
QLI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179285; 11463916 [H]