Click here to switch to the map view.

The map label for this gene is apeB [H]

Identifier: 169824918

GI number: 169824918

Start: 1329821

End: 1331083

Strand: Direct

Name: apeB [H]

Synonym: FMG_1221

Alternate gene names: 169824918

Gene position: 1329821-1331083 (Clockwise)

Preceding gene: 169824913

Following gene: 169824941

Centisome position: 73.98

GC content: 31.99

Gene sequence:

>1263_bases
ATGAACATAACAAAAGAATTAATGAATTTTATTGATAACAGTCCATCCGTATTTCACGTTATCGATAATTTCAAAAAAAC
ACTAACAGAAAACGGATTTACTGAATTAAAATTTAAAGATAATTGGAAAATCGAAAATGGCAAGGGATATTTTGTAACAA
ATAACGATTCATCAATTATTGCTTTTAAAGGAAGTTCTGATTTCGATAATATCAGATTGATTGGATCACATTCAGACAGT
CCAACTTTTAGAATAAAACCAAATTCTATCGTAAACAAAGACGGATTTTTGACATTAAACACTGAAGTTTATGGTGGACC
AATATTAAGCACATGGTTTGACCGTCCATTGTCTGTAGCTGGTAGAGTTGTGTTAAAATCAGACAATCCATTCAAACCTG
AAATCAAACATATCAATGTAGACAAGAATTTATTGATAATTCCTAACGTAGCAATCCACATGAACAGAGAAGTTAATAAC
GGATACAAATTCAATGCACAAAAAGATACATTGCCACTTTTAGCATTATCAGAAAAAGATTCGAAAATTTCTTTCGAGGA
AATTTTGGCAAGAAATACAGGAATAAACGCAGATGATATTTTAGATTTCGATTTATTCTTGTACGACAGACAAAAAGGAG
AATTTGTCGGAGAAAACGACGAATTTTATTCCGTAGGAAGAATCGATAATTTGGGAATGGCTTTTAATTCTATAAAATCA
TTAATAGATTCAAATGTTACTAACACATTAGCATTGACTATGGTTTTTGATAACGAAGAAATAGGTTCTTCAACAAAACA
AGGTGCAGGCAGCACACTTCTAAGTGATTGCTTCAAAAAAATCGTAGAAGATAACGATAAAAACTTCTACGAAGTATTGC
ACAATTCTTATTTGATAAGTGCAGACCAAGCTCACAGTTTGCATCCAAATTACACAGAAATGGCTGACCCTACTAACAGA
CCACTAATTAACAACGGCCCTGTTATTAAATACGCCGCAAACGGAGCATACACTTCTGATGCAGTTAGCTCTTCAGTATT
TAAAAAATTATGCTTAGATAAAAACATTCCATGCCAAGAATTCACAAACAGATCAGATAAAAGAGGTGGATCTACAATCG
GACCAATCACTGTTTCTAATTTGGATATTCAATCTATTGATATTGGAAATGCGATTCTTTCAATGCACTCTGTAAGAGAA
TTAGGTGGATGTAAAGACAACGAATATATCTACGAATTATTCAAATATTACTACGAATATTAA

Upstream 100 bases:

>100_bases
TCGCCCTGAAGTAATTTCATTATACCACTAACAATATTTTTTGTAAACTTTTAGTATTAAGTATTTTTATTTTTGGGTAT
ACTATTATTGAGGTGATTTT

Downstream 100 bases:

>100_bases
CAAATTGTAAATAAAAAGTTAATTTTTTAAAAACTTAAAAAAACGGAGATAAAATGAGCTTATTAAATTTAATTAGTTTT
ATCTCCGTTTATTTTATTAT

Product: putative aminopeptidase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNITKELMNFIDNSPSVFHVIDNFKKTLTENGFTELKFKDNWKIENGKGYFVTNNDSSIIAFKGSSDFDNIRLIGSHSDS
PTFRIKPNSIVNKDGFLTLNTEVYGGPILSTWFDRPLSVAGRVVLKSDNPFKPEIKHINVDKNLLIIPNVAIHMNREVNN
GYKFNAQKDTLPLLALSEKDSKISFEEILARNTGINADDILDFDLFLYDRQKGEFVGENDEFYSVGRIDNLGMAFNSIKS
LIDSNVTNTLALTMVFDNEEIGSSTKQGAGSTLLSDCFKKIVEDNDKNFYEVLHNSYLISADQAHSLHPNYTEMADPTNR
PLINNGPVIKYAANGAYTSDAVSSSVFKKLCLDKNIPCQEFTNRSDKRGGSTIGPITVSNLDIQSIDIGNAILSMHSVRE
LGGCKDNEYIYELFKYYYEY

Sequences:

>Translated_420_residues
MNITKELMNFIDNSPSVFHVIDNFKKTLTENGFTELKFKDNWKIENGKGYFVTNNDSSIIAFKGSSDFDNIRLIGSHSDS
PTFRIKPNSIVNKDGFLTLNTEVYGGPILSTWFDRPLSVAGRVVLKSDNPFKPEIKHINVDKNLLIIPNVAIHMNREVNN
GYKFNAQKDTLPLLALSEKDSKISFEEILARNTGINADDILDFDLFLYDRQKGEFVGENDEFYSVGRIDNLGMAFNSIKS
LIDSNVTNTLALTMVFDNEEIGSSTKQGAGSTLLSDCFKKIVEDNDKNFYEVLHNSYLISADQAHSLHPNYTEMADPTNR
PLINNGPVIKYAANGAYTSDAVSSSVFKKLCLDKNIPCQEFTNRSDKRGGSTIGPITVSNLDIQSIDIGNAILSMHSVRE
LGGCKDNEYIYELFKYYYEY
>Mature_420_residues
MNITKELMNFIDNSPSVFHVIDNFKKTLTENGFTELKFKDNWKIENGKGYFVTNNDSSIIAFKGSSDFDNIRLIGSHSDS
PTFRIKPNSIVNKDGFLTLNTEVYGGPILSTWFDRPLSVAGRVVLKSDNPFKPEIKHINVDKNLLIIPNVAIHMNREVNN
GYKFNAQKDTLPLLALSEKDSKISFEEILARNTGINADDILDFDLFLYDRQKGEFVGENDEFYSVGRIDNLGMAFNSIKS
LIDSNVTNTLALTMVFDNEEIGSSTKQGAGSTLLSDCFKKIVEDNDKNFYEVLHNSYLISADQAHSLHPNYTEMADPTNR
PLINNGPVIKYAANGAYTSDAVSSSVFKKLCLDKNIPCQEFTNRSDKRGGSTIGPITVSNLDIQSIDIGNAILSMHSVRE
LGGCKDNEYIYELFKYYYEY

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family [H]

Homologues:

Organism=Homo sapiens, GI156416028, Length=446, Percent_Identity=35.2017937219731, Blast_Score=289, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17552916, Length=450, Percent_Identity=33.3333333333333, Blast_Score=250, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6321905, Length=461, Percent_Identity=36.4425162689805, Blast_Score=286, Evalue=4e-78,
Organism=Saccharomyces cerevisiae, GI6322746, Length=457, Percent_Identity=27.5711159737418, Blast_Score=176, Evalue=9e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022984
- InterPro:   IPR001948 [H]

Pfam domain/function: PF02127 Peptidase_M18 [H]

EC number: NA

Molecular weight: Translated: 47166; Mature: 47166

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITKELMNFIDNSPSVFHVIDNFKKTLTENGFTELKFKDNWKIENGKGYFVTNNDSSII
CCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEECCCEEEECCCEEEEECCCCEEE
AFKGSSDFDNIRLIGSHSDSPTFRIKPNSIVNKDGFLTLNTEVYGGPILSTWFDRPLSVA
EEECCCCCCCEEEEECCCCCCEEEECCCCEECCCCEEEEECEECCCCHHHHHHCCCHHHC
GRVVLKSDNPFKPEIKHINVDKNLLIIPNVAIHMNREVNNGYKFNAQKDTLPLLALSEKD
CEEEEECCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCCEEECCCCCCCEEEEECCCC
SKISFEEILARNTGINADDILDFDLFLYDRQKGEFVGENDEFYSVGRIDNLGMAFNSIKS
CCCCHHHHHHHCCCCCHHHEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
LIDSNVTNTLALTMVFDNEEIGSSTKQGAGSTLLSDCFKKIVEDNDKNFYEVLHNSYLIS
HHHCCCCCEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCEEEE
ADQAHSLHPNYTEMADPTNRPLINNGPVIKYAANGAYTSDAVSSSVFKKLCLDKNIPCQE
CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
FTNRSDKRGGSTIGPITVSNLDIQSIDIGNAILSMHSVRELGGCKDNEYIYELFKYYYEY
HCCCCCCCCCCEECCEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNITKELMNFIDNSPSVFHVIDNFKKTLTENGFTELKFKDNWKIENGKGYFVTNNDSSII
CCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEECCCEEEECCCEEEEECCCCEEE
AFKGSSDFDNIRLIGSHSDSPTFRIKPNSIVNKDGFLTLNTEVYGGPILSTWFDRPLSVA
EEECCCCCCCEEEEECCCCCCEEEECCCCEECCCCEEEEECEECCCCHHHHHHCCCHHHC
GRVVLKSDNPFKPEIKHINVDKNLLIIPNVAIHMNREVNNGYKFNAQKDTLPLLALSEKD
CEEEEECCCCCCCCEEEEECCCCEEEECCEEEEEECCCCCCEEECCCCCCCEEEEECCCC
SKISFEEILARNTGINADDILDFDLFLYDRQKGEFVGENDEFYSVGRIDNLGMAFNSIKS
CCCCHHHHHHHCCCCCHHHEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHH
LIDSNVTNTLALTMVFDNEEIGSSTKQGAGSTLLSDCFKKIVEDNDKNFYEVLHNSYLIS
HHHCCCCCEEEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCEEEE
ADQAHSLHPNYTEMADPTNRPLINNGPVIKYAANGAYTSDAVSSSVFKKLCLDKNIPCQE
CCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
FTNRSDKRGGSTIGPITVSNLDIQSIDIGNAILSMHSVRELGGCKDNEYIYELFKYYYEY
HCCCCCCCCCCEECCEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]