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The map label for this gene is yrrO [H]

Identifier: 169824331

GI number: 169824331

Start: 698919

End: 700145

Strand: Direct

Name: yrrO [H]

Synonym: FMG_0634

Alternate gene names: 169824331

Gene position: 698919-700145 (Clockwise)

Preceding gene: 169824330

Following gene: 169824332

Centisome position: 38.88

GC content: 31.54

Gene sequence:

>1227_bases
ATGAAAAAAGTTGAATTATTAGCACCTGCCGGTGATTTAGATAAATTAAAAACAGCCATTGATTATGGTGCAGATGCAGT
GTACATGGCAGGTCCAGACTATGGATTGAGAACTGCATCTAAGAACTTCACAATAGAGGATATGAAAGAAGCTGTAGATT
ACGCTCATAGTAGAGGCAAGAAAATATATATAACAATGAATATATTAGCCCACAATGATGATTTGGAAGGAATTGAAGAC
TACATTCAAAACTTGATAGATATAAATGTAGATGCTCTTATTGTTTCTGATCCAGGTATTTATTCTATTATAAGAAGTAT
TAATAAAGATGTTGAAGTCCACATGTCGACACAAGCTTCTGTAACAAATTTTAGAACAGTAAAATATTGGATGGATCAAG
GCATAAAGAGAATTGTATTGGCTCGTGAATTGTCATTGAAAGAAATTCAAGATATCAAGAAAAATATTCCTGATTCCGAA
TTGGAATGTTTCGTACATGGAGCTATGTGTATGTCTTATTCAGGAAGATGTTTATTGAGTAACTACATGACTGGAAGAGA
CGCGAACAGGGGAGACTGTGCGCAAGCATGTAGATGGAAGTACAGACTTGTTGAAGAAAAAAGACCAGGAGAGTATTTTC
CAATTGAAGAGGATGAGAAGGGAACTTTTATTTTCAATTCAAAAGATTTGTGTATGATAGAACACTTAGATAAATTAATT
GCAGCAGGAATTGATAGTTTAAAAATAGAAGGTAGAGTTAAGAGTCAATATTATGTAGCAACGGTTGTTAGAAGCTACAG
AATTGCTATCGACAAATACTACAATAATGAATTTGATGAACCAACAGCAAAGAGACTTTTAGAAGAAATTAAAAAAGTTT
CTTACAGAGATTTTACTACAGGATTTTTTGAAAAAAAACCTGATGAAAATGATCAATTGTACGAATCATCATCTTACATT
AGAAAATACGATTTTGTAGGTTTATTATTGGATTATGATGAAGAAAGTAAAATTGCTACTTTTGAACAAAGAAACAGAGT
TTTCAAAGGTGACGAAGTAGAAATTTTTGGGCCAGAAGATGGATTTATTACTACAAAAATCGAAAAAATGTATGATGAGA
AGATGAATGAAATTGAAGTAGCTAATAAAGCTCAACAAATTTTTAAAATTAAGATTGATCAAAAACTTCAACCAAATTCG
ATGATGAGAAAAAAGAGCGATAATTAA

Upstream 100 bases:

>100_bases
GATACAACTATCATTCCAATCGATGATGGAATGAGCATAACTAAATTAAAATAGCGATAGTCGGAAGTCTGTGATTTCCG
ACTATTTTTGAGGAGATTAA

Downstream 100 bases:

>100_bases
TTTTGGAATGTAATTTATACTATGATATAATCAGATTATGAAAACGAAAAAACTTAACAAAAAAGAAATTTTTATAATTA
TCATTTCTGTTTTAGTATTA

Product: collagenase family protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKKVELLAPAGDLDKLKTAIDYGADAVYMAGPDYGLRTASKNFTIEDMKEAVDYAHSRGKKIYITMNILAHNDDLEGIED
YIQNLIDINVDALIVSDPGIYSIIRSINKDVEVHMSTQASVTNFRTVKYWMDQGIKRIVLARELSLKEIQDIKKNIPDSE
LECFVHGAMCMSYSGRCLLSNYMTGRDANRGDCAQACRWKYRLVEEKRPGEYFPIEEDEKGTFIFNSKDLCMIEHLDKLI
AAGIDSLKIEGRVKSQYYVATVVRSYRIAIDKYYNNEFDEPTAKRLLEEIKKVSYRDFTTGFFEKKPDENDQLYESSSYI
RKYDFVGLLLDYDEESKIATFEQRNRVFKGDEVEIFGPEDGFITTKIEKMYDEKMNEIEVANKAQQIFKIKIDQKLQPNS
MMRKKSDN

Sequences:

>Translated_408_residues
MKKVELLAPAGDLDKLKTAIDYGADAVYMAGPDYGLRTASKNFTIEDMKEAVDYAHSRGKKIYITMNILAHNDDLEGIED
YIQNLIDINVDALIVSDPGIYSIIRSINKDVEVHMSTQASVTNFRTVKYWMDQGIKRIVLARELSLKEIQDIKKNIPDSE
LECFVHGAMCMSYSGRCLLSNYMTGRDANRGDCAQACRWKYRLVEEKRPGEYFPIEEDEKGTFIFNSKDLCMIEHLDKLI
AAGIDSLKIEGRVKSQYYVATVVRSYRIAIDKYYNNEFDEPTAKRLLEEIKKVSYRDFTTGFFEKKPDENDQLYESSSYI
RKYDFVGLLLDYDEESKIATFEQRNRVFKGDEVEIFGPEDGFITTKIEKMYDEKMNEIEVANKAQQIFKIKIDQKLQPNS
MMRKKSDN
>Mature_408_residues
MKKVELLAPAGDLDKLKTAIDYGADAVYMAGPDYGLRTASKNFTIEDMKEAVDYAHSRGKKIYITMNILAHNDDLEGIED
YIQNLIDINVDALIVSDPGIYSIIRSINKDVEVHMSTQASVTNFRTVKYWMDQGIKRIVLARELSLKEIQDIKKNIPDSE
LECFVHGAMCMSYSGRCLLSNYMTGRDANRGDCAQACRWKYRLVEEKRPGEYFPIEEDEKGTFIFNSKDLCMIEHLDKLI
AAGIDSLKIEGRVKSQYYVATVVRSYRIAIDKYYNNEFDEPTAKRLLEEIKKVSYRDFTTGFFEKKPDENDQLYESSSYI
RKYDFVGLLLDYDEESKIATFEQRNRVFKGDEVEIFGPEDGFITTKIEKMYDEKMNEIEVANKAQQIFKIKIDQKLQPNS
MMRKKSDN

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=439, Percent_Identity=36.6742596810934, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI87081910, Length=269, Percent_Identity=40.8921933085502, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1789548, Length=295, Percent_Identity=32.8813559322034, Blast_Score=148, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47177; Mature: 47177

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVELLAPAGDLDKLKTAIDYGADAVYMAGPDYGLRTASKNFTIEDMKEAVDYAHSRGK
CCCEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
KIYITMNILAHNDDLEGIEDYIQNLIDINVDALIVSDPGIYSIIRSINKDVEVHMSTQAS
EEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCEEEEEECCCC
VTNFRTVKYWMDQGIKRIVLARELSLKEIQDIKKNIPDSELECFVHGAMCMSYSGRCLLS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
NYMTGRDANRGDCAQACRWKYRLVEEKRPGEYFPIEEDEKGTFIFNSKDLCMIEHLDKLI
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
AAGIDSLKIEGRVKSQYYVATVVRSYRIAIDKYYNNEFDEPTAKRLLEEIKKVSYRDFTT
HCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
GFFEKKPDENDQLYESSSYIRKYDFVGLLLDYDEESKIATFEQRNRVFKGDEVEIFGPED
CHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCC
GFITTKIEKMYDEKMNEIEVANKAQQIFKIKIDQKLQPNSMMRKKSDN
CEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHCCCCC
>Mature Secondary Structure
MKKVELLAPAGDLDKLKTAIDYGADAVYMAGPDYGLRTASKNFTIEDMKEAVDYAHSRGK
CCCEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
KIYITMNILAHNDDLEGIEDYIQNLIDINVDALIVSDPGIYSIIRSINKDVEVHMSTQAS
EEEEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCEEEEEECCCC
VTNFRTVKYWMDQGIKRIVLARELSLKEIQDIKKNIPDSELECFVHGAMCMSYSGRCLLS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
NYMTGRDANRGDCAQACRWKYRLVEEKRPGEYFPIEEDEKGTFIFNSKDLCMIEHLDKLI
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
AAGIDSLKIEGRVKSQYYVATVVRSYRIAIDKYYNNEFDEPTAKRLLEEIKKVSYRDFTT
HCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
GFFEKKPDENDQLYESSSYIRKYDFVGLLLDYDEESKIATFEQRNRVFKGDEVEIFGPED
CHHCCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCEEHHHHHCCCCCCCEEEEECCCC
GFITTKIEKMYDEKMNEIEVANKAQQIFKIKIDQKLQPNSMMRKKSDN
CEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]