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The map label for this gene is udk [H]

Identifier: 169824299

GI number: 169824299

Start: 660565

End: 662187

Strand: Direct

Name: udk [H]

Synonym: FMG_0602

Alternate gene names: 169824299

Gene position: 660565-662187 (Clockwise)

Preceding gene: 169824298

Following gene: 169824300

Centisome position: 36.75

GC content: 29.14

Gene sequence:

>1623_bases
ATGATTAAGATAATTAACAACAATAAAATATACGACTATGAAGATAAAACGATTTATGATTATGCTATTAAATATGGATT
CGAAGATAGCATTGTCGCATTAAAAAACAATAAACTTGTCGATATTATGAGTTATGTTGAGAATGGAGATACAATTGAGT
TTGTAAATGAAAAAAGTGTTTACTCACAAGACACATTGATGCAAACTGGTATTTTATTGTTGCTATTGGCATTTAAATTA
AAATTTCCAAAAGACCAATTGGAAGTTGAATACACAATTGGTGACTACATGTATCTTGAATTTGAAAATAACAACGAAAT
TCATTTTAAAGATTTGGAAGAAATTCGAAAATTAATGGACGATTTGATTAATCAAAATCTGAGAATTGAAAGAGTCAAAG
TTTCTAGAAAAGAAGCTTTTGATATTTTCGAAAAGGAAGGCTACATTCAAAAATCAAGACTACTAAAAAGTCTAGATAAA
GAAGAGGTTTATCTGTACAAATGTCTGGATCATTACTTTGGAATAGAAGGATTTGTTGCTCCATACACTAGGTTTTTGAA
ACACTACAAACTTATAAATTATTTTCCGGGAATTGCATTAAGTGTCAGCAAAACTGGTGAATTTACTGATTTCAAAGAAC
AAAAAGCACTATCAAAAATATTTTCCAAATCAAAAAAATGGACAGATATGTTGGATATAGGATATGTGGGAAGCTTGAAT
GAAAAAATTCAAGATGGGAATATGGATTTTTTAGTTAGTGTTAATGAAGCTTATTTTGAAAACCAAATTTCTTATATAGC
AGATAAGATAATTTACAATAATGCAAGATTAGTACAAATATCTGGTCCTTCTTCATCTGGGAAAACCACTATGGCAGAAA
GACTTTCTGTGCAATTAGCCGTTAGAGGTAAAAAGCCTATACCTATTTCTATGGATAATTATTTTGTGAATAGAGTAGAC
ACGCCTTTGGATGAAGATGGAAATAAAGATTATGAATCTATTAATGCACTTGACTTAAAAACATTTAACACAGATTTAAT
GAGATTATTAGAAGGAGATTATGTAAACCTGCCAATTTATAATTTCATTACGGGCGAAAGAGAATATGGCGACACTTACA
CGAAACTAGATAATAATGGAATTATAATTGTCGAAGGAATTCATGGACTAAATCCAAAACTTACAAGTCTAGTTCCAGAA
AAAGATAAGTACAAAATTTATGTGTCAGCATTGACACAACTTAGTATTGACTGTCACAATAGAATTTCAACTACAGATAT
GAGACTTATGAGAAGAATGGTAAGAGATTTTGTTCAAAGAGATAAAAGTGTCGATGATACATTATCTGAATGGCCAAGAG
TTCATGCCGCTGAATATATCAATGTTTTTCCTTATCAAAATGAAGCAGACAGCATAATAGACTCATCATTAATTTATGAA
ATTAATATTTTGAAAAAATACGTTTTGAAATTAGTAGATAATTATGACAAGAATGGTCCAAACTTTACAGAAATTGAAAG
GTTAAAGTCGATTTTGAATTATTTTATAGAAATCAAAGACGATTCAATAGTTCCTAAAAACTCGATTTTGCAAGAATTTA
TAGGAGATTATGATGAACAATAG

Upstream 100 bases:

>100_bases
CCAGAAAAAATGGGAAAATATCAAAAATACGAATCTATGGTTTTTGAAAGCAAAAGAGATGATTTATTTGAAAAGATATT
GAACGATTTGGAGAGCAAAT

Downstream 100 bases:

>100_bases
AATTGTATACACTAATTCAAATTCTTCAAAACTTTTTGACGATAATATATCTTATTTAAAAAATCAGATTACGAATGGAA
ATACTGATTTTATTTTGATT

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MIKIINNNKIYDYEDKTIYDYAIKYGFEDSIVALKNNKLVDIMSYVENGDTIEFVNEKSVYSQDTLMQTGILLLLLAFKL
KFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEIRKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDK
EEVYLYKCLDHYFGIEGFVAPYTRFLKHYKLINYFPGIALSVSKTGEFTDFKEQKALSKIFSKSKKWTDMLDIGYVGSLN
EKIQDGNMDFLVSVNEAYFENQISYIADKIIYNNARLVQISGPSSSGKTTMAERLSVQLAVRGKKPIPISMDNYFVNRVD
TPLDEDGNKDYESINALDLKTFNTDLMRLLEGDYVNLPIYNFITGEREYGDTYTKLDNNGIIIVEGIHGLNPKLTSLVPE
KDKYKIYVSALTQLSIDCHNRISTTDMRLMRRMVRDFVQRDKSVDDTLSEWPRVHAAEYINVFPYQNEADSIIDSSLIYE
INILKKYVLKLVDNYDKNGPNFTEIERLKSILNYFIEIKDDSIVPKNSILQEFIGDYDEQ

Sequences:

>Translated_540_residues
MIKIINNNKIYDYEDKTIYDYAIKYGFEDSIVALKNNKLVDIMSYVENGDTIEFVNEKSVYSQDTLMQTGILLLLLAFKL
KFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEIRKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDK
EEVYLYKCLDHYFGIEGFVAPYTRFLKHYKLINYFPGIALSVSKTGEFTDFKEQKALSKIFSKSKKWTDMLDIGYVGSLN
EKIQDGNMDFLVSVNEAYFENQISYIADKIIYNNARLVQISGPSSSGKTTMAERLSVQLAVRGKKPIPISMDNYFVNRVD
TPLDEDGNKDYESINALDLKTFNTDLMRLLEGDYVNLPIYNFITGEREYGDTYTKLDNNGIIIVEGIHGLNPKLTSLVPE
KDKYKIYVSALTQLSIDCHNRISTTDMRLMRRMVRDFVQRDKSVDDTLSEWPRVHAAEYINVFPYQNEADSIIDSSLIYE
INILKKYVLKLVDNYDKNGPNFTEIERLKSILNYFIEIKDDSIVPKNSILQEFIGDYDEQ
>Mature_540_residues
MIKIINNNKIYDYEDKTIYDYAIKYGFEDSIVALKNNKLVDIMSYVENGDTIEFVNEKSVYSQDTLMQTGILLLLLAFKL
KFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEIRKLMDDLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDK
EEVYLYKCLDHYFGIEGFVAPYTRFLKHYKLINYFPGIALSVSKTGEFTDFKEQKALSKIFSKSKKWTDMLDIGYVGSLN
EKIQDGNMDFLVSVNEAYFENQISYIADKIIYNNARLVQISGPSSSGKTTMAERLSVQLAVRGKKPIPISMDNYFVNRVD
TPLDEDGNKDYESINALDLKTFNTDLMRLLEGDYVNLPIYNFITGEREYGDTYTKLDNNGIIIVEGIHGLNPKLTSLVPE
KDKYKIYVSALTQLSIDCHNRISTTDMRLMRRMVRDFVQRDKSVDDTLSEWPRVHAAEYINVFPYQNEADSIIDSSLIYE
INILKKYVLKLVDNYDKNGPNFTEIERLKSILNYFIEIKDDSIVPKNSILQEFIGDYDEQ

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 62980; Mature: 62980

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIINNNKIYDYEDKTIYDYAIKYGFEDSIVALKNNKLVDIMSYVENGDTIEFVNEKSV
CEEEEECCEEEECCCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCC
YSQDTLMQTGILLLLLAFKLKFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEIRKLMD
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEEHHHHHHHHHHHH
DLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDKEEVYLYKCLDHYFGIEGFVA
HHHCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHH
PYTRFLKHYKLINYFPGIALSVSKTGEFTDFKEQKALSKIFSKSKKWTDMLDIGYVGSLN
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
EKIQDGNMDFLVSVNEAYFENQISYIADKIIYNNARLVQISGPSSSGKTTMAERLSVQLA
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHHHHHEEEEE
VRGKKPIPISMDNYFVNRVDTPLDEDGNKDYESINALDLKTFNTDLMRLLEGDYVNLPIY
ECCCCCCEEECCCHHHHCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHCCCEECCCEE
NFITGEREYGDTYTKLDNNGIIIVEGIHGLNPKLTSLVPEKDKYKIYVSALTQLSIDCHN
EEECCCCCCCCHHEEECCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHCC
RISTTDMRLMRRMVRDFVQRDKSVDDTLSEWPRVHAAEYINVFPYQNEADSIIDSSLIYE
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHEEECCCCCCHHHHHCCHHHHH
INILKKYVLKLVDNYDKNGPNFTEIERLKSILNYFIEIKDDSIVPKNSILQEFIGDYDEQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIKIINNNKIYDYEDKTIYDYAIKYGFEDSIVALKNNKLVDIMSYVENGDTIEFVNEKSV
CEEEEECCEEEECCCCEEEEEHHHCCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCCC
YSQDTLMQTGILLLLLAFKLKFPKDQLEVEYTIGDYMYLEFENNNEIHFKDLEEIRKLMD
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEEHHHHHHHHHHHH
DLINQNLRIERVKVSRKEAFDIFEKEGYIQKSRLLKSLDKEEVYLYKCLDHYFGIEGFVA
HHHCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHH
PYTRFLKHYKLINYFPGIALSVSKTGEFTDFKEQKALSKIFSKSKKWTDMLDIGYVGSLN
HHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCC
EKIQDGNMDFLVSVNEAYFENQISYIADKIIYNNARLVQISGPSSSGKTTMAERLSVQLA
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHEECCEEEEEEECCCCCCCHHHHHHHEEEEE
VRGKKPIPISMDNYFVNRVDTPLDEDGNKDYESINALDLKTFNTDLMRLLEGDYVNLPIY
ECCCCCCEEECCCHHHHCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHCCCEECCCEE
NFITGEREYGDTYTKLDNNGIIIVEGIHGLNPKLTSLVPEKDKYKIYVSALTQLSIDCHN
EEECCCCCCCCHHEEECCCCEEEEECCCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHCC
RISTTDMRLMRRMVRDFVQRDKSVDDTLSEWPRVHAAEYINVFPYQNEADSIIDSSLIYE
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHEEECCCCCCHHHHHCCHHHHH
INILKKYVLKLVDNYDKNGPNFTEIERLKSILNYFIEIKDDSIVPKNSILQEFIGDYDEQ
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]