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The map label for this gene is ugpB [C]

Identifier: 169823836

GI number: 169823836

Start: 161236

End: 162516

Strand: Direct

Name: ugpB [C]

Synonym: FMG_0139

Alternate gene names: 169823836

Gene position: 161236-162516 (Clockwise)

Preceding gene: 169823835

Following gene: 169823837

Centisome position: 8.97

GC content: 34.27

Gene sequence:

>1281_bases
ATGAAAAAACTTTTTAAAGTAACTTTATTCTTAATGGTTACAGCACTACTTATGAGCGGATGCTCCAAAGGAAACACAAA
TGAATCCTCTAAAGGAACAACTGATGATAAAAATTCAGCAGAAACTAAAGAAGTTTCACTTATGATTCCTGAATGGGGAG
TTCCTACAAAAGAAATGTTGGCTGATTTTGAAAAAGAATCAGGCATTAAAGTAAATGTAATGCCAACGAGCTGGGATGAT
ATCAGAAACAAAATCTCTACAGCAGCAGCAGGAAAGAATGCAGCAGCAGATGTTTATGAAGTTGACTGGTCATGGGTTGG
TGAATTCCAAAAAGCTGGCTGGTTAGAACCAATCGAAATGGACAAGGCAGATTTGGAAGATATGAAGACTACTTCAACAT
TTATGATTGACAATAAGTTATATGCAATTCCATATTCTAACGACTACAGAATCGGATTCTACAACAAAGCCATGTATGAA
AAAGCTGGTTTAACAAAAGAGCCACAAACATGGGATGATGTTATCAACGATGCAAAAGTTCTAAAAGAAAAGAAGGTTTG
CGAATATCCTATTAGTAACCCAATGGCAGCTGATGAAAAAACAACTACTACATTCTTATGGTTAGCTTACACAAGAAATG
GCAAAGTATTTAATGATGACAACACATTAAATGAAGAAGCTACATTGGATGCTCTTACAATCTTGGATAAAATAAATCGT
CCTGGATTATCAGATCCAGCTAACAGAACAGCTTCTGGTGCATTTGATAAATTGAAAAATGGCGAATGTGCATTCATGGT
AGGACCATCATCTAACGTAATGAGTGTTAACGACAAAGAAAAATCAAAAGTAGTTGACCAAGTAATGCCAATAGTATTAC
CAGGAAAAGACAAAAAAGCTACAGCTACAGTACCATTTGCTGAAGCAATCGGAGTATCACCATATAGCAAGAACAAAGAA
GCTGCAATGAAATTTGCAAAATGGTACACTTCAAAAGAAACACAATACAAATTGTATAATGCATTATCTAACTTACCTAC
AAGAACTTCTGTAATTGAACAACTTCTAAACGAAGGTAAAATCAAAAACCCAGGAGCTATGTTAGAACTTGCAAAAGTAA
TCGAAACACCATTCCCTAATGGAGTTCCTATTTATTATACAAAAATGAGCACAGAAATATTCAATACTATCAACCAAATG
GCTAACGAAAAATTAACACCAGAACAAGCAGCAAAACAAATGGTAACAAATGTTAATAAGATAGTTGAAGAAAATAAATA
A

Upstream 100 bases:

>100_bases
AGATAAGATTTCTCTTAGAATAAAAAATGATGCCATATTAAATTATTTTGATAAGAACACAGGCGAATCTGTGTCAATAT
AAAAATTAAAGGAGTATACT

Downstream 100 bases:

>100_bases
CAAACTAAGCTCAAATTTTTCGGAATTTGAGCTTTTTTTACTATCGTAAAATCTAAGGAGCAAAAATGAAAAAAAGCAAA
AAAGGATACCTACTTTTGCT

Product: sugar ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MKKLFKVTLFLMVTALLMSGCSKGNTNESSKGTTDDKNSAETKEVSLMIPEWGVPTKEMLADFEKESGIKVNVMPTSWDD
IRNKISTAAAGKNAAADVYEVDWSWVGEFQKAGWLEPIEMDKADLEDMKTTSTFMIDNKLYAIPYSNDYRIGFYNKAMYE
KAGLTKEPQTWDDVINDAKVLKEKKVCEYPISNPMAADEKTTTTFLWLAYTRNGKVFNDDNTLNEEATLDALTILDKINR
PGLSDPANRTASGAFDKLKNGECAFMVGPSSNVMSVNDKEKSKVVDQVMPIVLPGKDKKATATVPFAEAIGVSPYSKNKE
AAMKFAKWYTSKETQYKLYNALSNLPTRTSVIEQLLNEGKIKNPGAMLELAKVIETPFPNGVPIYYTKMSTEIFNTINQM
ANEKLTPEQAAKQMVTNVNKIVEENK

Sequences:

>Translated_426_residues
MKKLFKVTLFLMVTALLMSGCSKGNTNESSKGTTDDKNSAETKEVSLMIPEWGVPTKEMLADFEKESGIKVNVMPTSWDD
IRNKISTAAAGKNAAADVYEVDWSWVGEFQKAGWLEPIEMDKADLEDMKTTSTFMIDNKLYAIPYSNDYRIGFYNKAMYE
KAGLTKEPQTWDDVINDAKVLKEKKVCEYPISNPMAADEKTTTTFLWLAYTRNGKVFNDDNTLNEEATLDALTILDKINR
PGLSDPANRTASGAFDKLKNGECAFMVGPSSNVMSVNDKEKSKVVDQVMPIVLPGKDKKATATVPFAEAIGVSPYSKNKE
AAMKFAKWYTSKETQYKLYNALSNLPTRTSVIEQLLNEGKIKNPGAMLELAKVIETPFPNGVPIYYTKMSTEIFNTINQM
ANEKLTPEQAAKQMVTNVNKIVEENK
>Mature_426_residues
MKKLFKVTLFLMVTALLMSGCSKGNTNESSKGTTDDKNSAETKEVSLMIPEWGVPTKEMLADFEKESGIKVNVMPTSWDD
IRNKISTAAAGKNAAADVYEVDWSWVGEFQKAGWLEPIEMDKADLEDMKTTSTFMIDNKLYAIPYSNDYRIGFYNKAMYE
KAGLTKEPQTWDDVINDAKVLKEKKVCEYPISNPMAADEKTTTTFLWLAYTRNGKVFNDDNTLNEEATLDALTILDKINR
PGLSDPANRTASGAFDKLKNGECAFMVGPSSNVMSVNDKEKSKVVDQVMPIVLPGKDKKATATVPFAEAIGVSPYSKNKE
AAMKFAKWYTSKETQYKLYNALSNLPTRTSVIEQLLNEGKIKNPGAMLELAKVIETPFPNGVPIYYTKMSTEIFNTINQM
ANEKLTPEQAAKQMVTNVNKIVEENK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47519; Mature: 47519

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFKVTLFLMVTALLMSGCSKGNTNESSKGTTDDKNSAETKEVSLMIPEWGVPTKEML
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH
ADFEKESGIKVNVMPTSWDDIRNKISTAAAGKNAAADVYEVDWSWVGEFQKAGWLEPIEM
HHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCCHHC
DKADLEDMKTTSTFMIDNKLYAIPYSNDYRIGFYNKAMYEKAGLTKEPQTWDDVINDAKV
CHHHHHHHHCCCEEEECCEEEEEECCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHHH
LKEKKVCEYPISNPMAADEKTTTTFLWLAYTRNGKVFNDDNTLNEEATLDALTILDKINR
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHCC
PGLSDPANRTASGAFDKLKNGECAFMVGPSSNVMSVNDKEKSKVVDQVMPIVLPGKDKKA
CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCEEECCCCCCC
TATVPFAEAIGVSPYSKNKEAAMKFAKWYTSKETQYKLYNALSNLPTRTSVIEQLLNEGK
EEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
IKNPGAMLELAKVIETPFPNGVPIYYTKMSTEIFNTINQMANEKLTPEQAAKQMVTNVNK
CCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IVEENK
HHHCCC
>Mature Secondary Structure
MKKLFKVTLFLMVTALLMSGCSKGNTNESSKGTTDDKNSAETKEVSLMIPEWGVPTKEML
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH
ADFEKESGIKVNVMPTSWDDIRNKISTAAAGKNAAADVYEVDWSWVGEFQKAGWLEPIEM
HHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHCCCCCCHHC
DKADLEDMKTTSTFMIDNKLYAIPYSNDYRIGFYNKAMYEKAGLTKEPQTWDDVINDAKV
CHHHHHHHHCCCEEEECCEEEEEECCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHHH
LKEKKVCEYPISNPMAADEKTTTTFLWLAYTRNGKVFNDDNTLNEEATLDALTILDKINR
HHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHCC
PGLSDPANRTASGAFDKLKNGECAFMVGPSSNVMSVNDKEKSKVVDQVMPIVLPGKDKKA
CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCEEECCCCCCC
TATVPFAEAIGVSPYSKNKEAAMKFAKWYTSKETQYKLYNALSNLPTRTSVIEQLLNEGK
EEECCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
IKNPGAMLELAKVIETPFPNGVPIYYTKMSTEIFNTINQMANEKLTPEQAAKQMVTNVNK
CCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IVEENK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA