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The map label for this gene is ycaC [C]

Identifier: 169823806

GI number: 169823806

Start: 129875

End: 130414

Strand: Direct

Name: ycaC [C]

Synonym: FMG_0109

Alternate gene names: 169823806

Gene position: 129875-130414 (Clockwise)

Preceding gene: 169823805

Following gene: 169823809

Centisome position: 7.23

GC content: 34.44

Gene sequence:

>540_bases
ATGGAAAAGTTTAATGTGAACAAAGACGATATGATAATTTTGTTGATTGATTTACAGGAAAAATTGGTGCCTGTTCTTCA
CGACAATGAATATGTAATAAATCATACGAAGGCTGTGTTGGAGATGGCGAGAATTTACGATATTCCTGTGATTACTACAC
GCCAATATCCGAAAGGACTTGGAGATACTGTCGAATGTTTGAAGGAATACGAGACGAAGGTGTTCGACAAGGTTGATTTT
ACTGCAAAGCTTGATGATGTTATGAATGAAATCAAAAAAACTGGAAGAAAACAAATCGTGGTTGTAGGAGCGGAAACTCA
CATTTGTGTTTACCAAACGATACGTGATTTGATTGACGATTACAAGATGATTGTGCTTGAAGATTGTGTTACAAGTAGAC
GTGTTGAAAATAAAATGAATGCGATAGCGAATTTCAGAGAAATGAATTGCTTGGTTATCAATTCCGAAACATTGATTTTC
GATATTTTAAAAAGAGCGGGAAGTGCTGAATTTAAAACTTTGTCCAAATTAATCAAATAA

Upstream 100 bases:

>100_bases
ATTGATAAGCTTTTTGATTTATAAAAATATTGGGAGATAAATAATTCTAAGCACGCTTAATTGCGTGCTTTTTTGTGGTA
TGATAGTTTTGAGGTGAGAT

Downstream 100 bases:

>100_bases
AAAAATAAATCCAACTTTACTTTTCAATAAGCAAAGTTGGATTTTTTTATCCTAATAATAAATACAAGAAGTGTGCGCTG
ATTCCAGCTGCAATTCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Amidase; Isochorismatase Family Hydrolase; Isochorismatase Domain-Containing; Hydrolase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Isochorismatase; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family; Nicotinamidase-Related Amidase

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEKFNVNKDDMIILLIDLQEKLVPVLHDNEYVINHTKAVLEMARIYDIPVITTRQYPKGLGDTVECLKEYETKVFDKVDF
TAKLDDVMNEIKKTGRKQIVVVGAETHICVYQTIRDLIDDYKMIVLEDCVTSRRVENKMNAIANFREMNCLVINSETLIF
DILKRAGSAEFKTLSKLIK

Sequences:

>Translated_179_residues
MEKFNVNKDDMIILLIDLQEKLVPVLHDNEYVINHTKAVLEMARIYDIPVITTRQYPKGLGDTVECLKEYETKVFDKVDF
TAKLDDVMNEIKKTGRKQIVVVGAETHICVYQTIRDLIDDYKMIVLEDCVTSRRVENKMNAIANFREMNCLVINSETLIF
DILKRAGSAEFKTLSKLIK
>Mature_179_residues
MEKFNVNKDDMIILLIDLQEKLVPVLHDNEYVINHTKAVLEMARIYDIPVITTRQYPKGLGDTVECLKEYETKVFDKVDF
TAKLDDVMNEIKKTGRKQIVVVGAETHICVYQTIRDLIDDYKMIVLEDCVTSRRVENKMNAIANFREMNCLVINSETLIF
DILKRAGSAEFKTLSKLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI103471987, Length=178, Percent_Identity=29.7752808988764, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI209969695, Length=180, Percent_Identity=28.3333333333333, Blast_Score=78, Evalue=3e-15,
Organism=Homo sapiens, GI13376007, Length=196, Percent_Identity=26.0204081632653, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17540156, Length=177, Percent_Identity=32.2033898305085, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI21357489, Length=173, Percent_Identity=30.635838150289, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI19922924, Length=183, Percent_Identity=27.8688524590164, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20706; Mature: 20706

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFNVNKDDMIILLIDLQEKLVPVLHDNEYVINHTKAVLEMARIYDIPVITTRQYPKGL
CCCCCCCCCCEEEEEEECHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCC
GDTVECLKEYETKVFDKVDFTAKLDDVMNEIKKTGRKQIVVVGAETHICVYQTIRDLIDD
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
YKMIVLEDCVTSRRVENKMNAIANFREMNCLVINSETLIFDILKRAGSAEFKTLSKLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHC
>Mature Secondary Structure
MEKFNVNKDDMIILLIDLQEKLVPVLHDNEYVINHTKAVLEMARIYDIPVITTRQYPKGL
CCCCCCCCCCEEEEEEECHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEECCCCCCCC
GDTVECLKEYETKVFDKVDFTAKLDDVMNEIKKTGRKQIVVVGAETHICVYQTIRDLIDD
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
YKMIVLEDCVTSRRVENKMNAIANFREMNCLVINSETLIFDILKRAGSAEFKTLSKLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA