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The map label for this gene is xkdC [H]

Identifier: 169823790

GI number: 169823790

Start: 115046

End: 116023

Strand: Direct

Name: xkdC [H]

Synonym: FMG_0093

Alternate gene names: 169823790

Gene position: 115046-116023 (Clockwise)

Preceding gene: 169823789

Following gene: 169823791

Centisome position: 6.4

GC content: 35.79

Gene sequence:

>978_bases
ATGAGCTACGCAAAAGAAGCCAACAGAATATTGGAAGATTACAGAAATCAATCCAAAAGAGAATTGGATATGAGATTTGA
TGAAGTTTTTCGAAAAGTTCCAGAATACGAGAATTTGCTCCAACACAGAAACGAGATTGGATACGAATATCTGAGAAAAA
GCATCAAAGCTGACAAGGAAGAATTAAAGAATTTGGAAGATGAAATCAAATCCACTGAAGAAAAAATGCACAAATTGCTC
ATATTAAGTGGGTTTCCAAGTGATTATTTGAACTTGAAGCATCGCTGCGACAAGTGTGAGGATACTGGAGTTTACAACGG
AAAAATGTGTTCTTGCAAGAAAACAATCATGGTGAACATTGCTCGTGAGAAAAGTTCACTTAACGAGCAAATGAAACAAC
AAAACTTCGATAGGTTTGACATCAACGTGTTTGACACGAAAAAAGACAGCTCACAAGGAATGTCCCAACGTGAAAACATG
CAAGCAATTAGCGAGAATTTGAAATATTACTCGAAGAATTACACTAAAAACGCGAAGTCACTTTTGTTGTACGGACAAGT
TGGAACAGGAAAGACGTATTTGTTATCGTGCATGGCGAAAGAAATCATTGAAAATGGATTTTCTGTGATATATTTGTCTG
CAATGCAATTATTGAAGCAGCTTTTTTCGATAAGATATCAGAATTTCAACGAAGCGCCACAACCAGAGGTTGAAGATATT
ATTTACAACTGCGATGTGCTTATGATTGATGATTTGGGAACGGAAAATTCAACAGAAACCAACATCAGTTTATTGTTTGA
TCTGTTGAATTACAGAATTCAAAACCAAAAAACTACGATAATTTCGACAAATATCGACCTTGATGATTTGCAAAGTCAAT
ACGATCAGAGAATTTCATCGAGAATCAAGGGCGAATTCATACCGATACAATTTTTCGGCAGGGATATAAGAGAAGAGAGG
TTCAAAAACGGACTATGA

Upstream 100 bases:

>100_bases
GACCGAAGACTAACGATATTGAAAACAAGGCTACAAATATTAACTCGAAATTTTTGAACGATTTTATCAAGAAATCAAAA
GAGCAAAAGGATAAATAATA

Downstream 100 bases:

>100_bases
TTTATGTAACAGCTGAACAAATGAGACAAATCGACCACTACACGATTCATGAAATCGGAATTCCATCGATTGTCTTGATG
GAAAATGCCAAAGCACAAAT

Product: DNA replication protein DnaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSYAKEANRILEDYRNQSKRELDMRFDEVFRKVPEYENLLQHRNEIGYEYLRKSIKADKEELKNLEDEIKSTEEKMHKLL
ILSGFPSDYLNLKHRCDKCEDTGVYNGKMCSCKKTIMVNIAREKSSLNEQMKQQNFDRFDINVFDTKKDSSQGMSQRENM
QAISENLKYYSKNYTKNAKSLLLYGQVGTGKTYLLSCMAKEIIENGFSVIYLSAMQLLKQLFSIRYQNFNEAPQPEVEDI
IYNCDVLMIDDLGTENSTETNISLLFDLLNYRIQNQKTTIISTNIDLDDLQSQYDQRISSRIKGEFIPIQFFGRDIREER
FKNGL

Sequences:

>Translated_325_residues
MSYAKEANRILEDYRNQSKRELDMRFDEVFRKVPEYENLLQHRNEIGYEYLRKSIKADKEELKNLEDEIKSTEEKMHKLL
ILSGFPSDYLNLKHRCDKCEDTGVYNGKMCSCKKTIMVNIAREKSSLNEQMKQQNFDRFDINVFDTKKDSSQGMSQRENM
QAISENLKYYSKNYTKNAKSLLLYGQVGTGKTYLLSCMAKEIIENGFSVIYLSAMQLLKQLFSIRYQNFNEAPQPEVEDI
IYNCDVLMIDDLGTENSTETNISLLFDLLNYRIQNQKTTIISTNIDLDDLQSQYDQRISSRIKGEFIPIQFFGRDIREER
FKNGL
>Mature_324_residues
SYAKEANRILEDYRNQSKRELDMRFDEVFRKVPEYENLLQHRNEIGYEYLRKSIKADKEELKNLEDEIKSTEEKMHKLLI
LSGFPSDYLNLKHRCDKCEDTGVYNGKMCSCKKTIMVNIAREKSSLNEQMKQQNFDRFDINVFDTKKDSSQGMSQRENMQ
AISENLKYYSKNYTKNAKSLLLYGQVGTGKTYLLSCMAKEIIENGFSVIYLSAMQLLKQLFSIRYQNFNEAPQPEVEDII
YNCDVLMIDDLGTENSTETNISLLFDLLNYRIQNQKTTIISTNIDLDDLQSQYDQRISSRIKGEFIPIQFFGRDIREERF
KNGL

Specific function: May function as a transcriptional antiterminator [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 38232; Mature: 38101

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAKEANRILEDYRNQSKRELDMRFDEVFRKVPEYENLLQHRNEIGYEYLRKSIKADKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ELKNLEDEIKSTEEKMHKLLILSGFPSDYLNLKHRCDKCEDTGVYNGKMCSCKKTIMVNI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEH
AREKSSLNEQMKQQNFDRFDINVFDTKKDSSQGMSQRENMQAISENLKYYSKNYTKNAKS
HHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LLLYGQVGTGKTYLLSCMAKEIIENGFSVIYLSAMQLLKQLFSIRYQNFNEAPQPEVEDI
EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IYNCDVLMIDDLGTENSTETNISLLFDLLNYRIQNQKTTIISTNIDLDDLQSQYDQRISS
HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
RIKGEFIPIQFFGRDIREERFKNGL
HHCCCEEEHHHHCCHHHHHHHHCCC
>Mature Secondary Structure 
SYAKEANRILEDYRNQSKRELDMRFDEVFRKVPEYENLLQHRNEIGYEYLRKSIKADKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ELKNLEDEIKSTEEKMHKLLILSGFPSDYLNLKHRCDKCEDTGVYNGKMCSCKKTIMVNI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHEEH
AREKSSLNEQMKQQNFDRFDINVFDTKKDSSQGMSQRENMQAISENLKYYSKNYTKNAKS
HHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LLLYGQVGTGKTYLLSCMAKEIIENGFSVIYLSAMQLLKQLFSIRYQNFNEAPQPEVEDI
EEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IYNCDVLMIDDLGTENSTETNISLLFDLLNYRIQNQKTTIISTNIDLDDLQSQYDQRISS
HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
RIKGEFIPIQFFGRDIREERFKNGL
HHCCCEEEHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]