| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is hsdM [H]
Identifier: 169823773
GI number: 169823773
Start: 93910
End: 96396
Strand: Direct
Name: hsdM [H]
Synonym: FMG_0076
Alternate gene names: 169823773
Gene position: 93910-96396 (Clockwise)
Preceding gene: 169823772
Following gene: 169823774
Centisome position: 5.22
GC content: 32.73
Gene sequence:
>2487_bases ATGGCAGTAAAAAAATCAGAATTATACTCCCTTTTATGGGATGCAGCAAATAAACTCAGAGGTGGAGTGGAACCGTCAAG ATACAAGGATTATGTTCTACTACTTTTGTTTTTCAAATACGTTACAGATAAATACAAAGGACAAAGATACGGTGAATTTG AAATAGGAGAAGGAGCTTCCTTTGATGATATTATAATGGCAAAGGGAAAGCCAGACGTAGGCGAACGTGTAGACAAAATA ATTCAAAAATTTCTAGAAATAAATAACCTAAAAGGTGCGCTTCCAGATGTTTCGTTTAACAACCCTGAAGAATTAGGAAA AGGAAAAGAATTAGTTGACAAAGTATCAGGATTAATTGCGATTTTCCAAAATCCTGCCATAGATTTCAAGAAAAACAGAG CAAGTGGCGATGATATTATCGGAGATGCTTATGAGTATTTCATGATGAAATTTGCACAGGAATCTGGAAAAAGCAAAGGA CAGTTCTATACGCCAAGTGAAGTTTCGAGAGTGATTTCCAGACTTATTGGTATTGGAGATATTGAAAATTCACCAAATAA GAAATGGACGTTACACGATCCAGCCGCAGGAAGCGGAAGTTTATTAATAAGAGCAGCAGATGAAGCACCTGTCGATAGTA ACGGCGACTCTATTGTAACTATATACGGACAAGAAAAATATTCAGACACGGCAGGTCTTGCCAAGATGAATTTTATTCTA CACAACAAAGGAACTGGAGAAGTTCATAGCGACAATACATTATCAGCTCCGTATTATACTGATGATTTTGGAGAATTGCG AAAATTCGATTTTATAGTTATGAATCCACCTTTTTCAGACAAGGATTGGTCAGATGGAATCAAAGCAGATGAAGACACAT ATCATAGATTTGATGGATACGGCATACCTCCAGAAAAAAACGGAGATTATGCATGGTTTCTGCACGTTTTAAAAGCATTA AACGAAAATGGAAAAGCTGGAATAATTCTTCCTCACGGAGTTTTGTTTAGAGGAAATGCAGAAGAAACCATAAGAAAAGA AATATTGAAGAGAAAATACATTAAAGGAATTGTAGGACTTCCTTCAAACTTGTTCTACGGAACAGGAATACCAGCTTGTA TAATAATTATCGACAAAGAAAATGCTGATAAAAGAGAAGGATTGTTTATGATAGATGCAAGTGACGGATTCAAAAAAGAC GGCGATAAGAACAGACTCAGAGAACAAGACATCGAAAAAATCGTACAAGTTTTTACTAATAAAACTGAGATTAAAGGATA TTCACGATTTATCGCTTACAAAGAAATCATAGAAGACAATAATGCGAACCTAAATGTTCCAAGATATATTAGCAAAATCA ACAAAAATTTACCTCAAAACATCAACTCACATCTAAATGGCGGAATACCAGAAAAAGACATCGACTCGATGGAAAGATTG TGGAATATATCCAGTGAATTAAGAAATAAAATTTTTGAAGAAAGAGAAAACGCAAATGTATACGACTTGAAAGTAGAGCC AGACAGCATAGAAGATCTAATATTTGAAGACGAAAAAATCAAAAAAGTAATACAAGAAGAAACAATAGACATATTCAATA CTTGGAAACAACAATCAGAAACCATATTGGAAAATATTGACAGTACAATAATTCCCAAAAAATTAATAAGAGAACTAGGA TTTTCGATATTAAAAGCCTACGAAAAATCCAAACTATTAGACAATTATGATGCGTATGATTTTCTATTGAACTATTGGAA TGAAAAAATGCAAGATGATGTATACCTAATAAAAGCATCGGGATATGAAGCAGGTGCTGAAATAGATAGGAAATATGGCA AGAAAAAAATAAAAGACGAACAAGGAATCGAAATAGAAATAGAAGATAAAAAGAAATTCAAATCATTTGATGGACTTTTA ATTCCTAAAGAAATTATAGAAACAGAATACTTCAATGATGAACTAGAAGAAATATCAGCCATAAACTCAACAATTTCAGA AATAGATGAGAAAATGAATGAAATATTCGAAGAAAATTCAGGAGAAGATGGACTTATCAATGATGCAATCAATGATAAGG GAAATATCACCAAGAAAAGCTTAAATGATAGAATCAAACAAATCGACAAAATCAAGGACAAGGAAGAATATGAGCTACTC ATTTCATATCAAAACTTATTAAAGAGAAAAGATTCACAAAATAAAGAACTAAAATCAAAAACAAAATCACTCGATGAAAG AATTGAAGAACAATACAGTAAACTAACGGAAAAAGAAATAAAAAACTTGTTAGTTGACAAGAAATGGATGGCGAGAATCA ATAATGATATAAAAGATGCTGTAGATAGCGAAATAAATAATATTGCAGCTAAGCTTGTAGAAATATCTAAACGCTACGAA ACAACATTGTCACAACTTGAAGAAAAGGCCGAAAACTCACGAAATGATGTAAGAAATGCATTGGAAAGGATGGGATATTC ATGGTAG
Upstream 100 bases:
>100_bases GATAGATAATAAAATTAAAAAGACAGAACTACAAGAATTTGCAGGTATTACATCAAAAAACTATTGCAAGAATAAAAACA ATCAAGGAGTTAAAAATACA
Downstream 100 bases:
>100_bases ATTATCCTGAAAAAATAGAGTTCTTGCTCTACAAAAACGAATTGTCAGAAGCCAAAATTCAAGTTGTCGTAAAAGATGAA ACCATTTGGCTAACACAAAA
Product: type I restriction-modification system specificity subunit
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MAVKKSELYSLLWDAANKLRGGVEPSRYKDYVLLLLFFKYVTDKYKGQRYGEFEIGEGASFDDIIMAKGKPDVGERVDKI IQKFLEINNLKGALPDVSFNNPEELGKGKELVDKVSGLIAIFQNPAIDFKKNRASGDDIIGDAYEYFMMKFAQESGKSKG QFYTPSEVSRVISRLIGIGDIENSPNKKWTLHDPAAGSGSLLIRAADEAPVDSNGDSIVTIYGQEKYSDTAGLAKMNFIL HNKGTGEVHSDNTLSAPYYTDDFGELRKFDFIVMNPPFSDKDWSDGIKADEDTYHRFDGYGIPPEKNGDYAWFLHVLKAL NENGKAGIILPHGVLFRGNAEETIRKEILKRKYIKGIVGLPSNLFYGTGIPACIIIIDKENADKREGLFMIDASDGFKKD GDKNRLREQDIEKIVQVFTNKTEIKGYSRFIAYKEIIEDNNANLNVPRYISKINKNLPQNINSHLNGGIPEKDIDSMERL WNISSELRNKIFEERENANVYDLKVEPDSIEDLIFEDEKIKKVIQEETIDIFNTWKQQSETILENIDSTIIPKKLIRELG FSILKAYEKSKLLDNYDAYDFLLNYWNEKMQDDVYLIKASGYEAGAEIDRKYGKKKIKDEQGIEIEIEDKKKFKSFDGLL IPKEIIETEYFNDELEEISAINSTISEIDEKMNEIFEENSGEDGLINDAINDKGNITKKSLNDRIKQIDKIKDKEEYELL ISYQNLLKRKDSQNKELKSKTKSLDERIEEQYSKLTEKEIKNLLVDKKWMARINNDIKDAVDSEINNIAAKLVEISKRYE TTLSQLEEKAENSRNDVRNALERMGYSW
Sequences:
>Translated_828_residues MAVKKSELYSLLWDAANKLRGGVEPSRYKDYVLLLLFFKYVTDKYKGQRYGEFEIGEGASFDDIIMAKGKPDVGERVDKI IQKFLEINNLKGALPDVSFNNPEELGKGKELVDKVSGLIAIFQNPAIDFKKNRASGDDIIGDAYEYFMMKFAQESGKSKG QFYTPSEVSRVISRLIGIGDIENSPNKKWTLHDPAAGSGSLLIRAADEAPVDSNGDSIVTIYGQEKYSDTAGLAKMNFIL HNKGTGEVHSDNTLSAPYYTDDFGELRKFDFIVMNPPFSDKDWSDGIKADEDTYHRFDGYGIPPEKNGDYAWFLHVLKAL NENGKAGIILPHGVLFRGNAEETIRKEILKRKYIKGIVGLPSNLFYGTGIPACIIIIDKENADKREGLFMIDASDGFKKD GDKNRLREQDIEKIVQVFTNKTEIKGYSRFIAYKEIIEDNNANLNVPRYISKINKNLPQNINSHLNGGIPEKDIDSMERL WNISSELRNKIFEERENANVYDLKVEPDSIEDLIFEDEKIKKVIQEETIDIFNTWKQQSETILENIDSTIIPKKLIRELG FSILKAYEKSKLLDNYDAYDFLLNYWNEKMQDDVYLIKASGYEAGAEIDRKYGKKKIKDEQGIEIEIEDKKKFKSFDGLL IPKEIIETEYFNDELEEISAINSTISEIDEKMNEIFEENSGEDGLINDAINDKGNITKKSLNDRIKQIDKIKDKEEYELL ISYQNLLKRKDSQNKELKSKTKSLDERIEEQYSKLTEKEIKNLLVDKKWMARINNDIKDAVDSEINNIAAKLVEISKRYE TTLSQLEEKAENSRNDVRNALERMGYSW >Mature_827_residues AVKKSELYSLLWDAANKLRGGVEPSRYKDYVLLLLFFKYVTDKYKGQRYGEFEIGEGASFDDIIMAKGKPDVGERVDKII QKFLEINNLKGALPDVSFNNPEELGKGKELVDKVSGLIAIFQNPAIDFKKNRASGDDIIGDAYEYFMMKFAQESGKSKGQ FYTPSEVSRVISRLIGIGDIENSPNKKWTLHDPAAGSGSLLIRAADEAPVDSNGDSIVTIYGQEKYSDTAGLAKMNFILH NKGTGEVHSDNTLSAPYYTDDFGELRKFDFIVMNPPFSDKDWSDGIKADEDTYHRFDGYGIPPEKNGDYAWFLHVLKALN ENGKAGIILPHGVLFRGNAEETIRKEILKRKYIKGIVGLPSNLFYGTGIPACIIIIDKENADKREGLFMIDASDGFKKDG DKNRLREQDIEKIVQVFTNKTEIKGYSRFIAYKEIIEDNNANLNVPRYISKINKNLPQNINSHLNGGIPEKDIDSMERLW NISSELRNKIFEERENANVYDLKVEPDSIEDLIFEDEKIKKVIQEETIDIFNTWKQQSETILENIDSTIIPKKLIRELGF SILKAYEKSKLLDNYDAYDFLLNYWNEKMQDDVYLIKASGYEAGAEIDRKYGKKKIKDEQGIEIEIEDKKKFKSFDGLLI PKEIIETEYFNDELEEISAINSTISEIDEKMNEIFEENSGEDGLINDAINDKGNITKKSLNDRIKQIDKIKDKEEYELLI SYQNLLKRKDSQNKELKSKTKSLDERIEEQYSKLTEKEIKNLLVDKKWMARINNDIKDAVDSEINNIAAKLVEISKRYET TLSQLEEKAENSRNDVRNALERMGYSW
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=397, Percent_Identity=25.4408060453401, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 94872; Mature: 94741
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKKSELYSLLWDAANKLRGGVEPSRYKDYVLLLLFFKYVTDKYKGQRYGEFEIGEGAS CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC FDDIIMAKGKPDVGERVDKIIQKFLEINNLKGALPDVSFNNPEELGKGKELVDKVSGLIA CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH IFQNPAIDFKKNRASGDDIIGDAYEYFMMKFAQESGKSKGQFYTPSEVSRVISRLIGIGD HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC IENSPNKKWTLHDPAAGSGSLLIRAADEAPVDSNGDSIVTIYGQEKYSDTAGLAKMNFIL CCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHCHHHEEEEE HNKGTGEVHSDNTLSAPYYTDDFGELRKFDFIVMNPPFSDKDWSDGIKADEDTYHRFDGY ECCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCC GIPPEKNGDYAWFLHVLKALNENGKAGIILPHGVLFRGNAEETIRKEILKRKYIKGIVGL CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCC PSNLFYGTGIPACIIIIDKENADKREGLFMIDASDGFKKDGDKNRLREQDIEKIVQVFTN CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC KTEIKGYSRFIAYKEIIEDNNANLNVPRYISKINKNLPQNINSHLNGGIPEKDIDSMERL CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH WNISSELRNKIFEERENANVYDLKVEPDSIEDLIFEDEKIKKVIQEETIDIFNTWKQQSE HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TILENIDSTIIPKKLIRELGFSILKAYEKSKLLDNYDAYDFLLNYWNEKMQDDVYLIKAS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEC GYEAGAEIDRKYGKKKIKDEQGIEIEIEDKKKFKSFDGLLIPKEIIETEYFNDELEEISA CCCCCHHHHHHHCHHHCCCCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH INSTISEIDEKMNEIFEENSGEDGLINDAINDKGNITKKSLNDRIKQIDKIKDKEEYELL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH ISYQNLLKRKDSQNKELKSKTKSLDERIEEQYSKLTEKEIKNLLVDKKWMARINNDIKDA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VDSEINNIAAKLVEISKRYETTLSQLEEKAENSRNDVRNALERMGYSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure AVKKSELYSLLWDAANKLRGGVEPSRYKDYVLLLLFFKYVTDKYKGQRYGEFEIGEGAS CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC FDDIIMAKGKPDVGERVDKIIQKFLEINNLKGALPDVSFNNPEELGKGKELVDKVSGLIA CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHH IFQNPAIDFKKNRASGDDIIGDAYEYFMMKFAQESGKSKGQFYTPSEVSRVISRLIGIGD HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC IENSPNKKWTLHDPAAGSGSLLIRAADEAPVDSNGDSIVTIYGQEKYSDTAGLAKMNFIL CCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCHHCHHHEEEEE HNKGTGEVHSDNTLSAPYYTDDFGELRKFDFIVMNPPFSDKDWSDGIKADEDTYHRFDGY ECCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHCCCC GIPPEKNGDYAWFLHVLKALNENGKAGIILPHGVLFRGNAEETIRKEILKRKYIKGIVGL CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHCC PSNLFYGTGIPACIIIIDKENADKREGLFMIDASDGFKKDGDKNRLREQDIEKIVQVFTN CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC KTEIKGYSRFIAYKEIIEDNNANLNVPRYISKINKNLPQNINSHLNGGIPEKDIDSMERL CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHH WNISSELRNKIFEERENANVYDLKVEPDSIEDLIFEDEKIKKVIQEETIDIFNTWKQQSE HHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TILENIDSTIIPKKLIRELGFSILKAYEKSKLLDNYDAYDFLLNYWNEKMQDDVYLIKAS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEC GYEAGAEIDRKYGKKKIKDEQGIEIEIEDKKKFKSFDGLLIPKEIIETEYFNDELEEISA CCCCCHHHHHHHCHHHCCCCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHH INSTISEIDEKMNEIFEENSGEDGLINDAINDKGNITKKSLNDRIKQIDKIKDKEEYELL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH ISYQNLLKRKDSQNKELKSKTKSLDERIEEQYSKLTEKEIKNLLVDKKWMARINNDIKDA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VDSEINNIAAKLVEISKRYETTLSQLEEKAENSRNDVRNALERMGYSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]