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The map label for this gene is comM [H]

Identifier: 169823765

GI number: 169823765

Start: 86392

End: 87912

Strand: Direct

Name: comM [H]

Synonym: FMG_0068

Alternate gene names: 169823765

Gene position: 86392-87912 (Clockwise)

Preceding gene: 169823764

Following gene: 169823766

Centisome position: 4.81

GC content: 41.75

Gene sequence:

>1521_bases
ATGTATTCGAAAGTAAAAACGTGTTGTTTGGAAGGATTGAACGGATATGTCGTGGAATGCGAGTGCGACCTTGCGAATGG
ACTGCGTTCGTTTAACATCGTTGGCCTTCCTGATACTTCTATAAAAGAATCCAAGGAAAGAGTGCGCTCTGCGATTGAAA
ACACTGGAATCAGATTTCCAGTGAAACGTATCACGATTAATTTGGCGCCGGCAAATTTGAGAAAAGAAGGTTCCCAGCTA
GACCTTGCGATTGCGATGGCGATTTTGCAATCAATGGGAGTGGTGGAAGATTTTTCAGAAAAATGGGCGTTCATCGGAGA
ACTATCATTGGACGGACGACTAAATCCAGTAAACGGATCGTTGTGCATGGTGTTGTCACTTAAAGATTTGGGATACGAAC
GAGTTTACATACCCAAACAAAACGCACAAGAATGCAGCATGGTCAAAGGAATAGAAAAGGTTTGTGTGGAAAGTTTGGAT
GAAATCATCAGGATTTTGAATGGCGAAGAAGAGTTGAAAATTCTGGATGACATTGACATCATGCAACAAGAAATACATTA
CGACGTTGATTTTTCGGACATAAAAGGGCAGAAATTTCTCAAAAGAGCGATGGAAATATCTGCGGCGGGATTTCACAATT
TGTTGATGATTGGACCTCCTGGAAGCGGCAAAACAATGTCTGCTATGAGACTCAGCACGATTTTGCCCGACATGAGCTTT
GATGAAATAATGGAAACCACGAAAATTTACTCCGTAGCAGGATTATTAGGAGAGAAAAACATCGTAACAACAAGACCATT
TCGATCCCCTCACCACACCGCAAGCCAAGTCAGTTTGATAGGTGGTGGTAGAGTTCCAAAACCAGGGGAAATCAGCCTCG
CACACAACGGAGCATTGTTCCTAGACGAGCTTCCAGAATTTTCCAAATCGACAATAGAAGTGTTGCGCCAACCACTCGAA
ACAAAAAACATAACCATAACAAGAGTCAACGCATCCTTGTCATATCCTGCAAATTTCCTATTTGTTGCAGGAATGAATCC
GTGTCCTTGTGGATACTTTGGAGATCCTAACCACGAATGTACTTGCTCGCAAAACCAAATCGCAAACTATCTCAACAAAG
TCAGCCGCCCGATACTCGATAGAATTGACATCCACGTCGAAGTTTCGCCAGTAAAATTGGACGAACTCACAACAGATGAA
CAATGCGACACATCAGAACAAATCAAAAAACGAGTCGAAGCAGCACGAGAAATCCAAAAACAACGCTTCAAAAATGAAAA
AATCACGACCAATTCACAAATGAACACCCGACAAATTAGAAAATACTGCAAATTAAACGACGAACTAAACTCCATAATAC
AATTGGCATTCGACAAATACAAATTCTCCGCCAGATCATTCGACAAAATCCTCAAAATATCACGCACAATCGCAGACCTA
GACGGAAAAGAAAACATCGAAGCAAAGCATTTGATGGAAGCCATCAGATATAGGACAGTGGATCAGAAATACTGGGGGTA
G

Upstream 100 bases:

>100_bases
ATAAAATTGGTTGATAATTAATGTCTGTTGAAAAATCAAAATGCGTAATTGTCAATTTTTCGGTATAAATCACATTAATA
ATTAATAACAAGGAGAAAAT

Downstream 100 bases:

>100_bases
TGGGGGCAAAGGAGAGAAGATTAAAATACAATTAGAGAGCTTTACCGATAAACATAAAGAAAAGATATGGAGAGATGGAT
TTTACGAAAAATCACCAGAG

Product: putative ATPase ComM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MYSKVKTCCLEGLNGYVVECECDLANGLRSFNIVGLPDTSIKESKERVRSAIENTGIRFPVKRITINLAPANLRKEGSQL
DLAIAMAILQSMGVVEDFSEKWAFIGELSLDGRLNPVNGSLCMVLSLKDLGYERVYIPKQNAQECSMVKGIEKVCVESLD
EIIRILNGEEELKILDDIDIMQQEIHYDVDFSDIKGQKFLKRAMEISAAGFHNLLMIGPPGSGKTMSAMRLSTILPDMSF
DEIMETTKIYSVAGLLGEKNIVTTRPFRSPHHTASQVSLIGGGRVPKPGEISLAHNGALFLDELPEFSKSTIEVLRQPLE
TKNITITRVNASLSYPANFLFVAGMNPCPCGYFGDPNHECTCSQNQIANYLNKVSRPILDRIDIHVEVSPVKLDELTTDE
QCDTSEQIKKRVEAAREIQKQRFKNEKITTNSQMNTRQIRKYCKLNDELNSIIQLAFDKYKFSARSFDKILKISRTIADL
DGKENIEAKHLMEAIRYRTVDQKYWG

Sequences:

>Translated_506_residues
MYSKVKTCCLEGLNGYVVECECDLANGLRSFNIVGLPDTSIKESKERVRSAIENTGIRFPVKRITINLAPANLRKEGSQL
DLAIAMAILQSMGVVEDFSEKWAFIGELSLDGRLNPVNGSLCMVLSLKDLGYERVYIPKQNAQECSMVKGIEKVCVESLD
EIIRILNGEEELKILDDIDIMQQEIHYDVDFSDIKGQKFLKRAMEISAAGFHNLLMIGPPGSGKTMSAMRLSTILPDMSF
DEIMETTKIYSVAGLLGEKNIVTTRPFRSPHHTASQVSLIGGGRVPKPGEISLAHNGALFLDELPEFSKSTIEVLRQPLE
TKNITITRVNASLSYPANFLFVAGMNPCPCGYFGDPNHECTCSQNQIANYLNKVSRPILDRIDIHVEVSPVKLDELTTDE
QCDTSEQIKKRVEAAREIQKQRFKNEKITTNSQMNTRQIRKYCKLNDELNSIIQLAFDKYKFSARSFDKILKISRTIADL
DGKENIEAKHLMEAIRYRTVDQKYWG
>Mature_506_residues
MYSKVKTCCLEGLNGYVVECECDLANGLRSFNIVGLPDTSIKESKERVRSAIENTGIRFPVKRITINLAPANLRKEGSQL
DLAIAMAILQSMGVVEDFSEKWAFIGELSLDGRLNPVNGSLCMVLSLKDLGYERVYIPKQNAQECSMVKGIEKVCVESLD
EIIRILNGEEELKILDDIDIMQQEIHYDVDFSDIKGQKFLKRAMEISAAGFHNLLMIGPPGSGKTMSAMRLSTILPDMSF
DEIMETTKIYSVAGLLGEKNIVTTRPFRSPHHTASQVSLIGGGRVPKPGEISLAHNGALFLDELPEFSKSTIEVLRQPLE
TKNITITRVNASLSYPANFLFVAGMNPCPCGYFGDPNHECTCSQNQIANYLNKVSRPILDRIDIHVEVSPVKLDELTTDE
QCDTSEQIKKRVEAAREIQKQRFKNEKITTNSQMNTRQIRKYCKLNDELNSIIQLAFDKYKFSARSFDKILKISRTIADL
DGKENIEAKHLMEAIRYRTVDQKYWG

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=502, Percent_Identity=40.0398406374502, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56908; Mature: 56908

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKVKTCCLEGLNGYVVECECDLANGLRSFNIVGLPDTSIKESKERVRSAIENTGIRFP
CCHHHHHHHHCCCCCEEEEEEECHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEE
VKRITINLAPANLRKEGSQLDLAIAMAILQSMGVVEDFSEKWAFIGELSLDGRLNPVNGS
EEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCC
LCMVLSLKDLGYERVYIPKQNAQECSMVKGIEKVCVESLDEIIRILNGEEELKILDDIDI
EEEEEEHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHH
MQQEIHYDVDFSDIKGQKFLKRAMEISAAGFHNLLMIGPPGSGKTMSAMRLSTILPDMSF
HHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCH
DEIMETTKIYSVAGLLGEKNIVTTRPFRSPHHTASQVSLIGGGRVPKPGEISLAHNGALF
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCEEEECCCEEE
LDELPEFSKSTIEVLRQPLETKNITITRVNASLSYPANFLFVAGMNPCPCGYFGDPNHEC
HHHCCHHHHHHHHHHHCCCCCCCEEEEEEECEECCCCCEEEEECCCCCCCCCCCCCCCCC
TCSQNQIANYLNKVSRPILDRIDIHVEVSPVKLDELTTDEQCDTSEQIKKRVEAAREIQK
CCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
QRFKNEKITTNSQMNTRQIRKYCKLNDELNSIIQLAFDKYKFSARSFDKILKISRTIADL
HHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGKENIEAKHLMEAIRYRTVDQKYWG
CCCCCCCHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MYSKVKTCCLEGLNGYVVECECDLANGLRSFNIVGLPDTSIKESKERVRSAIENTGIRFP
CCHHHHHHHHCCCCCEEEEEEECHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEE
VKRITINLAPANLRKEGSQLDLAIAMAILQSMGVVEDFSEKWAFIGELSLDGRLNPVNGS
EEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCC
LCMVLSLKDLGYERVYIPKQNAQECSMVKGIEKVCVESLDEIIRILNGEEELKILDDIDI
EEEEEEHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHH
MQQEIHYDVDFSDIKGQKFLKRAMEISAAGFHNLLMIGPPGSGKTMSAMRLSTILPDMSF
HHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCH
DEIMETTKIYSVAGLLGEKNIVTTRPFRSPHHTASQVSLIGGGRVPKPGEISLAHNGALF
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHEEEEECCCCCCCCCEEEECCCEEE
LDELPEFSKSTIEVLRQPLETKNITITRVNASLSYPANFLFVAGMNPCPCGYFGDPNHEC
HHHCCHHHHHHHHHHHCCCCCCCEEEEEEECEECCCCCEEEEECCCCCCCCCCCCCCCCC
TCSQNQIANYLNKVSRPILDRIDIHVEVSPVKLDELTTDEQCDTSEQIKKRVEAAREIQK
CCCHHHHHHHHHHHHHHHHHHEEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
QRFKNEKITTNSQMNTRQIRKYCKLNDELNSIIQLAFDKYKFSARSFDKILKISRTIADL
HHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGKENIEAKHLMEAIRYRTVDQKYWG
CCCCCCCHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]