| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is 169823756
Identifier: 169823756
GI number: 169823756
Start: 77964
End: 78836
Strand: Direct
Name: 169823756
Synonym: FMG_0059
Alternate gene names: NA
Gene position: 77964-78836 (Clockwise)
Preceding gene: 169823755
Following gene: 169823757
Centisome position: 4.34
GC content: 31.62
Gene sequence:
>873_bases ATGGGATGGAGAACAGTATTAATTTCAGGTCGAGCAAAGCTCGACTTGAAATTAAATAATCTAGTTATTAGAAAAGAAGA AATCGTAAAAATTCATATACCAGAAATTGCTGTGTTGATAATCGATTCAACAATGGTTTCATTTACAACAGCATTGATTG AGAAATTGATAGCAGAAAAAGTAAAAATAATTTTCTGCGGAAAGGATCATAACACAATTGGAGAAATTGTTAATTACTAC AATAAACATAATTCTCCTCTAATGATTAGAAAGCAAATTTCATGGCAGAATAATTCTAAACAAAAGACGTGGAGAGAAAT TACCAAAGAGAAAATCAATAGGCAAGCTTTGCTATTGAAATTTATAGGTAACGAAAATGCCAATCTTCTATTAGAATATA AATCACAAGTGCAGGATGGAGATGTTTCGAACAGGGAAGGTCACGCAGCAAAAGTATATTTCAATAGTCTTTTTGGCAAA GATTTTTCGAGAAGCCAAGATAATCCGACAAATGCGATGCTGAATTTCGGATATTCTATATTACTGTCAATATTCACACG AGAGATCACATCCTCGGGATACTTAACACAACTAGGGATATTTCACGAAAATCAATTCAATTACTACAATTTATCAAGCG ATTTAATGGAACCGCTACGACCTATGATTGATAATATTGTATATTTTTATGAACCAGAGAAATTCGACAAAGAAGAAAAA ATAGCAACATTAAAAATCATGGACGAAGAAGTTTTCATAGGAAAAACAAGGTATACATTGCTCAATGCAGTTAATGAGTA TTGCAAGTCGGTGTTTTTAGCATTGGAGAAAGGAGAAGAACAATTAATTAAATTTATTGATTATGAGTTATAG
Upstream 100 bases:
>100_bases CTGAATGTGGAAAGCCAAGAATTACGAATTTACCTGACAACACATATCTAGTATATAAATCAATAACAGGAATATATGAA AAGAGGATAAGAATAAAATA
Downstream 100 bases:
>100_bases ATATATGAGAACAATTGTATTTTTTGATTTGCCAACAATATCACTGGATGATAAAAAAAGATACCGAGCTTTTAGAAAAT TTTTGCTGTCAGAAGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Protein; Crispr-; CRISPR-Associated Protein Cas1 Family; Cytoplasmic Protein; CRISPR-Associated -Like; CRISPR Associated Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MGWRTVLISGRAKLDLKLNNLVIRKEEIVKIHIPEIAVLIIDSTMVSFTTALIEKLIAEKVKIIFCGKDHNTIGEIVNYY NKHNSPLMIRKQISWQNNSKQKTWREITKEKINRQALLLKFIGNENANLLLEYKSQVQDGDVSNREGHAAKVYFNSLFGK DFSRSQDNPTNAMLNFGYSILLSIFTREITSSGYLTQLGIFHENQFNYYNLSSDLMEPLRPMIDNIVYFYEPEKFDKEEK IATLKIMDEEVFIGKTRYTLLNAVNEYCKSVFLALEKGEEQLIKFIDYEL
Sequences:
>Translated_290_residues MGWRTVLISGRAKLDLKLNNLVIRKEEIVKIHIPEIAVLIIDSTMVSFTTALIEKLIAEKVKIIFCGKDHNTIGEIVNYY NKHNSPLMIRKQISWQNNSKQKTWREITKEKINRQALLLKFIGNENANLLLEYKSQVQDGDVSNREGHAAKVYFNSLFGK DFSRSQDNPTNAMLNFGYSILLSIFTREITSSGYLTQLGIFHENQFNYYNLSSDLMEPLRPMIDNIVYFYEPEKFDKEEK IATLKIMDEEVFIGKTRYTLLNAVNEYCKSVFLALEKGEEQLIKFIDYEL >Mature_289_residues GWRTVLISGRAKLDLKLNNLVIRKEEIVKIHIPEIAVLIIDSTMVSFTTALIEKLIAEKVKIIFCGKDHNTIGEIVNYYN KHNSPLMIRKQISWQNNSKQKTWREITKEKINRQALLLKFIGNENANLLLEYKSQVQDGDVSNREGHAAKVYFNSLFGKD FSRSQDNPTNAMLNFGYSILLSIFTREITSSGYLTQLGIFHENQFNYYNLSSDLMEPLRPMIDNIVYFYEPEKFDKEEKI ATLKIMDEEVFIGKTRYTLLNAVNEYCKSVFLALEKGEEQLIKFIDYEL
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33732; Mature: 33601
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWRTVLISGRAKLDLKLNNLVIRKEEIVKIHIPEIAVLIIDSTMVSFTTALIEKLIAEK CCCEEEEEECCEEEEEEECCEEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCC VKIIFCGKDHNTIGEIVNYYNKHNSPLMIRKQISWQNNSKQKTWREITKEKINRQALLLK EEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCHHHEEEE FIGNENANLLLEYKSQVQDGDVSNREGHAAKVYFNSLFGKDFSRSQDNPTNAMLNFGYSI EECCCCCEEEEEEHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHH LLSIFTREITSSGYLTQLGIFHENQFNYYNLSSDLMEPLRPMIDNIVYFYEPEKFDKEEK HHHHHHHHHCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHCEEEEECCCCCCCHHH IATLKIMDEEVFIGKTRYTLLNAVNEYCKSVFLALEKGEEQLIKFIDYEL EEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure GWRTVLISGRAKLDLKLNNLVIRKEEIVKIHIPEIAVLIIDSTMVSFTTALIEKLIAEK CCEEEEEECCEEEEEEECCEEEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHHHHCC VKIIFCGKDHNTIGEIVNYYNKHNSPLMIRKQISWQNNSKQKTWREITKEKINRQALLLK EEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCHHHEEEE FIGNENANLLLEYKSQVQDGDVSNREGHAAKVYFNSLFGKDFSRSQDNPTNAMLNFGYSI EECCCCCEEEEEEHHCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHHHHH LLSIFTREITSSGYLTQLGIFHENQFNYYNLSSDLMEPLRPMIDNIVYFYEPEKFDKEEK HHHHHHHHHCCCCCEEEEEEEECCCCCEEECCHHHHHHHHHHHHCEEEEECCCCCCCHHH IATLKIMDEEVFIGKTRYTLLNAVNEYCKSVFLALEKGEEQLIKFIDYEL EEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA