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The map label for this gene is ssb [H]

Identifier: 169823543

GI number: 169823543

Start: 23554

End: 24021

Strand: Reverse

Name: ssb [H]

Synonym: FMG_P0029

Alternate gene names: 169823543

Gene position: 24021-23554 (Counterclockwise)

Preceding gene: 169823544

Following gene: 169823542

Centisome position: 12.7

GC content: 36.11

Gene sequence:

>468_bases
ATGAATAATGTAACTTTAATGGGAAGATTAACAAGGGATGTAGAATTGAGATACACTCAATCACAAGTAGCGATTGGTAG
ATTTACCGTTGCCGTTAACAGAAGATTAACTAAGGATAAAAGGCAACAAGCCGAGGCTAATAACCAACCTACAGCGGATT
TCATCAGTTGTGTTGCGTTTGGTAAACAAGCCGAAACTATAGCTCAATATGTGTCAAAGGGTATGAGGGTGTCATTATCT
GGAAGATTGCAAACAGGTTCTTATCAAAACAAAGAAGGTCAAACAGTTTATACAACCGATGTTGTTGTAGAACAATTTGA
TTTCATTGATAGCAATAACCAACATAACAATAATCAAGGCTATCAACCAGCTAATCAACAACCAGCAAACAATCAACAAA
ACAATCAACCGTTTGATGATGATTTAGGTATGGATGATATGGCATTTGGTGAAGAATTGCCATTCTAA

Upstream 100 bases:

>100_bases
TTTTAGGTACAATGATCGGAATGATTAACTTGTTTGGATTACTCGTTACACCGATATATTACATACATAAGAAAAATAAA
AAAATAAAGGAGAGTAGATT

Downstream 100 bases:

>100_bases
CAAGTTTATAACGAGAGGGGGAAATTTCTCCCTCTCTTCTTTATTTTGGTACAGGGGTCAGAAAAATTAACATGTCTTGA
TTACTCGTTATACCGATATA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNNVTLMGRLTRDVELRYTQSQVAIGRFTVAVNRRLTKDKRQQAEANNQPTADFISCVAFGKQAETIAQYVSKGMRVSLS
GRLQTGSYQNKEGQTVYTTDVVVEQFDFIDSNNQHNNNQGYQPANQQPANNQQNNQPFDDDLGMDDMAFGEELPF

Sequences:

>Translated_155_residues
MNNVTLMGRLTRDVELRYTQSQVAIGRFTVAVNRRLTKDKRQQAEANNQPTADFISCVAFGKQAETIAQYVSKGMRVSLS
GRLQTGSYQNKEGQTVYTTDVVVEQFDFIDSNNQHNNNQGYQPANQQPANNQQNNQPFDDDLGMDDMAFGEELPF
>Mature_155_residues
MNNVTLMGRLTRDVELRYTQSQVAIGRFTVAVNRRLTKDKRQQAEANNQPTADFISCVAFGKQAETIAQYVSKGMRVSLS
GRLQTGSYQNKEGQTVYTTDVVVEQFDFIDSNNQHNNNQGYQPANQQPANNQQNNQPFDDDLGMDDMAFGEELPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=103, Percent_Identity=33.9805825242718, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17491; Mature: 17491

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVTLMGRLTRDVELRYTQSQVAIGRFTVAVNRRLTKDKRQQAEANNQPTADFISCVAF
CCCEEEEEECCCCEEEEECCCHHHHHHEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GKQAETIAQYVSKGMRVSLSGRLQTGSYQNKEGQTVYTTDVVVEQFDFIDSNNQHNNNQG
CCHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCC
YQPANQQPANNQQNNQPFDDDLGMDDMAFGEELPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNNVTLMGRLTRDVELRYTQSQVAIGRFTVAVNRRLTKDKRQQAEANNQPTADFISCVAF
CCCEEEEEECCCCEEEEECCCHHHHHHEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
GKQAETIAQYVSKGMRVSLSGRLQTGSYQNKEGQTVYTTDVVVEQFDFIDSNNQHNNNQG
CCHHHHHHHHHHCCCEEEECCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCC
YQPANQQPANNQQNNQPFDDDLGMDDMAFGEELPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]