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The map label for this gene is traC [H]

Identifier: 169823531

GI number: 169823531

Start: 14689

End: 15618

Strand: Reverse

Name: traC [H]

Synonym: FMG_P0017

Alternate gene names: 169823531

Gene position: 15618-14689 (Counterclockwise)

Preceding gene: 169823532

Following gene: 169823530

Centisome position: 8.26

GC content: 27.53

Gene sequence:

>930_bases
ATGACTGAAAGATTTGATAATAAAAAGGAATACAAAAATATAGCAGAAAAGTTAATTAAGGTTTTAGAAAATGATGATAT
CGATGTTAATAACTGGAATAAAGGTTTTATTGGTTTTCATAATCCAACTACTAATAAAGAATATACTGGTAAAAATATTA
TTATATTAATGCTTTCACAAATGTTATCTAATTATTCAGATAATAGATACTTAACATTTAATCAAATTAAAAAACTAGGA
TTAAAACTTAAAAAAGGCTCAAAAGGTACTTGCTTAAATTATGTAAACACTTATAGAAAAGATTTGAAGAGAAATTTGAC
GAGGGAAGAATTGAATGATGTTGAATTGCTTAGAGAATTAGACCGCAAGGGCTTATTACAAAGTTATAAAAAATATTTTA
CAGTTTTTAACGGTGACGATATAGAAGGCTTGGAAGAAATTACTGACACAAAAGTTGATATAACTTGTATCATAGATATT
AATGAAATAGCAAGTAACATCGGCGTTGCAGTTAAAAATAAAACAATAAACACAGCACACTATAATCTAGATGATGATTG
CATTTATATGCCTAAATTAAATCAATTGACTTCTGGTTATGAACACTATCTAAAAACATTTTTCCACGAATTGACACACG
CAACAGGTCACAAAAATAGACTAGATAGAAAGTTAGGACAATATGGACTAGATGAAGAATTACATTCAACAGAAGAATTA
ATCGCTGAATTAGGTTCTATAATTCTTGCGAAATATTTTAATGTAAATGTAGATGAAAGCTTATATAAAAATTCACTGAT
TTATATAAAAAGTTGGTTAAGCCCTATAGAAGATAATAAAAAAGTTGAAGTGTTGGCAGCAGCAGTAGAACAAGCTATCC
AAGCTGTTACATTAATAACATCTAAATCAAAGGTTGAAAAGGCTGCTTAA

Upstream 100 bases:

>100_bases
GTATTTATGGGTACAAGGATCAGAACAAATAACAAACTTACTGCTGCCAACAATACCGCTATATTACATACATAACAAAG
AGATAAAGGAGAGAGAAACA

Downstream 100 bases:

>100_bases
TTGTAGCCTTTTATTGTTGGTACAGCAGTGGGAAATAATATCTAGTTCCTGCTGCTAATCTTATCGTTATATTATATACA
TAACAAAGATAAAGGAGAGT

Product: antirestriction protein

Products: NA

Alternate protein names: Replication primase [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTERFDNKKEYKNIAEKLIKVLENDDIDVNNWNKGFIGFHNPTTNKEYTGKNIIILMLSQMLSNYSDNRYLTFNQIKKLG
LKLKKGSKGTCLNYVNTYRKDLKRNLTREELNDVELLRELDRKGLLQSYKKYFTVFNGDDIEGLEEITDTKVDITCIIDI
NEIASNIGVAVKNKTINTAHYNLDDDCIYMPKLNQLTSGYEHYLKTFFHELTHATGHKNRLDRKLGQYGLDEELHSTEEL
IAELGSIILAKYFNVNVDESLYKNSLIYIKSWLSPIEDNKKVEVLAAAVEQAIQAVTLITSKSKVEKAA

Sequences:

>Translated_309_residues
MTERFDNKKEYKNIAEKLIKVLENDDIDVNNWNKGFIGFHNPTTNKEYTGKNIIILMLSQMLSNYSDNRYLTFNQIKKLG
LKLKKGSKGTCLNYVNTYRKDLKRNLTREELNDVELLRELDRKGLLQSYKKYFTVFNGDDIEGLEEITDTKVDITCIIDI
NEIASNIGVAVKNKTINTAHYNLDDDCIYMPKLNQLTSGYEHYLKTFFHELTHATGHKNRLDRKLGQYGLDEELHSTEEL
IAELGSIILAKYFNVNVDESLYKNSLIYIKSWLSPIEDNKKVEVLAAAVEQAIQAVTLITSKSKVEKAA
>Mature_308_residues
TERFDNKKEYKNIAEKLIKVLENDDIDVNNWNKGFIGFHNPTTNKEYTGKNIIILMLSQMLSNYSDNRYLTFNQIKKLGL
KLKKGSKGTCLNYVNTYRKDLKRNLTREELNDVELLRELDRKGLLQSYKKYFTVFNGDDIEGLEEITDTKVDITCIIDIN
EIASNIGVAVKNKTINTAHYNLDDDCIYMPKLNQLTSGYEHYLKTFFHELTHATGHKNRLDRKLGQYGLDEELHSTEELI
AELGSIILAKYFNVNVDESLYKNSLIYIKSWLSPIEDNKKVEVLAAAVEQAIQAVTLITSKSKVEKAA

Specific function: Required for autonomous replication in E.coli. Transferred into the recipient cell during bacterial conjugation. Catalyzes the synthesis of short oligoribonucleotide primers with CpA or pCpA at their 5'-termini on a single stranded template DNA [H]

COG id: COG4227

COG function: function code L; Antirestriction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013610
- InterPro:   IPR006171 [H]

Pfam domain/function: PF08401 DUF1738; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 35580; Mature: 35449

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERFDNKKEYKNIAEKLIKVLENDDIDVNNWNKGFIGFHNPTTNKEYTGKNIIILMLSQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHH
MLSNYSDNRYLTFNQIKKLGLKLKKGSKGTCLNYVNTYRKDLKRNLTREELNDVELLREL
HHHCCCCCCEEEHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DRKGLLQSYKKYFTVFNGDDIEGLEEITDTKVDITCIIDINEIASNIGVAVKNKTINTAH
HHHHHHHHHHHHEEECCCCCCHHHHHHCCCCEEEEEEEEHHHHHHHCCEEEECCEEEEEE
YNLDDDCIYMPKLNQLTSGYEHYLKTFFHELTHATGHKNRLDRKLGQYGLDEELHSTEEL
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
IAELGSIILAKYFNVNVDESLYKNSLIYIKSWLSPIEDNKKVEVLAAAVEQAIQAVTLIT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SKSKVEKAA
HHHHHHHCC
>Mature Secondary Structure 
TERFDNKKEYKNIAEKLIKVLENDDIDVNNWNKGFIGFHNPTTNKEYTGKNIIILMLSQ
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHH
MLSNYSDNRYLTFNQIKKLGLKLKKGSKGTCLNYVNTYRKDLKRNLTREELNDVELLREL
HHHCCCCCCEEEHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DRKGLLQSYKKYFTVFNGDDIEGLEEITDTKVDITCIIDINEIASNIGVAVKNKTINTAH
HHHHHHHHHHHHEEECCCCCCHHHHHHCCCCEEEEEEEEHHHHHHHCCEEEECCEEEEEE
YNLDDDCIYMPKLNQLTSGYEHYLKTFFHELTHATGHKNRLDRKLGQYGLDEELHSTEEL
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHH
IAELGSIILAKYFNVNVDESLYKNSLIYIKSWLSPIEDNKKVEVLAAAVEQAIQAVTLIT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SKSKVEKAA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1818755 [H]