| Definition | Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence. |
|---|---|
| Accession | NC_010371 |
| Length | 189,163 |
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The map label for this gene is 169823519
Identifier: 169823519
GI number: 169823519
Start: 8162
End: 8620
Strand: Reverse
Name: 169823519
Synonym: FMG_P0005
Alternate gene names: NA
Gene position: 8620-8162 (Counterclockwise)
Preceding gene: 169823520
Following gene: 169823518
Centisome position: 4.56
GC content: 30.94
Gene sequence:
>459_bases ATGGTATTAGATACAAATAATCATTCGGTCTTTCTGCTGCATTATCATTTGATAATGTGTGTTAAGTATCGAAATAATGT AATAGATGATGAAATAAATGAATTTCTTAAAAGTGTATTTGTAAAGATTCAAGATAGATACTGCATTAAATTAGAAGAGT TCAACCACGACAAAGATCATGTTCATATTCTTTTCAAGGCTGAACCTAAAAGTGAACTATCTAAGTTTATCAACGCATAC AAATCAGCAAGTAGTAGACTTGTTAAGAAGCAATACCCTAGAATAAGAAAAAGCCTTTATGATGAAATGTTTTGGTCTCA AAGCTTCTGCCTATTGTCAACCGGAGGGGCAACTGTTGATATAATAAAAAATTACATTCAAGAGCAAGGAGAAAAGGATG AGAAAGAAAAAAGGAGTAAAAAACAAAGCAATAAAATACAGATTATATCCAACGACTGA
Upstream 100 bases:
>100_bases TGGGGGATGAATTTCGTTATACAATGCGTAACCATTGATTTTATGTCAGATTTATAGTATAATATAGTCAGTATTAATGA AGATATTACGGAGCAATACA
Downstream 100 bases:
>100_bases ACAAGAAATATACTTTTCTAAATGCTTTGGATGTTGTAGAAAAATCTGGAACTTGATGCTTTGTGATAGAGAAAAATCAT ATAAAGAAACTGGAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS; IS Element Transposase; Transposase -Family Protein; Transposase And Inactivated Derivatives; Transposase Family Protein; Transposase-Related Protein; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISSoc10 OrfA Transposase; Transposase-Family Protein; Transposase Related Protein; ISSoc3 OrfA Transposase; ISCpe2 Transposase OrfA; Transposase Repeat Family IS; Transposase ORF A; Transposase OrfA For Insertion Sequence Element
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND
Sequences:
>Translated_152_residues MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND >Mature_152_residues MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18038; Mature: 18038
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDH CEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCE VHILFKAEPKSELSKFINAYKSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVD EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH IIKNYIQEQGEKDEKEKRSKKQSNKIQIISND HHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDH CEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCE VHILFKAEPKSELSKFINAYKSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVD EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH IIKNYIQEQGEKDEKEKRSKKQSNKIQIISND HHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA