Definition Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence.
Accession NC_010371
Length 189,163

Click here to switch to the map view.

The map label for this gene is 169823519

Identifier: 169823519

GI number: 169823519

Start: 8162

End: 8620

Strand: Reverse

Name: 169823519

Synonym: FMG_P0005

Alternate gene names: NA

Gene position: 8620-8162 (Counterclockwise)

Preceding gene: 169823520

Following gene: 169823518

Centisome position: 4.56

GC content: 30.94

Gene sequence:

>459_bases
ATGGTATTAGATACAAATAATCATTCGGTCTTTCTGCTGCATTATCATTTGATAATGTGTGTTAAGTATCGAAATAATGT
AATAGATGATGAAATAAATGAATTTCTTAAAAGTGTATTTGTAAAGATTCAAGATAGATACTGCATTAAATTAGAAGAGT
TCAACCACGACAAAGATCATGTTCATATTCTTTTCAAGGCTGAACCTAAAAGTGAACTATCTAAGTTTATCAACGCATAC
AAATCAGCAAGTAGTAGACTTGTTAAGAAGCAATACCCTAGAATAAGAAAAAGCCTTTATGATGAAATGTTTTGGTCTCA
AAGCTTCTGCCTATTGTCAACCGGAGGGGCAACTGTTGATATAATAAAAAATTACATTCAAGAGCAAGGAGAAAAGGATG
AGAAAGAAAAAAGGAGTAAAAAACAAAGCAATAAAATACAGATTATATCCAACGACTGA

Upstream 100 bases:

>100_bases
TGGGGGATGAATTTCGTTATACAATGCGTAACCATTGATTTTATGTCAGATTTATAGTATAATATAGTCAGTATTAATGA
AGATATTACGGAGCAATACA

Downstream 100 bases:

>100_bases
ACAAGAAATATACTTTTCTAAATGCTTTGGATGTTGTAGAAAAATCTGGAACTTGATGCTTTGTGATAGAGAAAAATCAT
ATAAAGAAACTGGAAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS; IS Element Transposase; Transposase -Family Protein; Transposase And Inactivated Derivatives; Transposase Family Protein; Transposase-Related Protein; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISSoc10 OrfA Transposase; Transposase-Family Protein; Transposase Related Protein; ISSoc3 OrfA Transposase; ISCpe2 Transposase OrfA; Transposase Repeat Family IS; Transposase ORF A; Transposase OrfA For Insertion Sequence Element

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY
KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND

Sequences:

>Translated_152_residues
MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY
KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND
>Mature_152_residues
MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDHVHILFKAEPKSELSKFINAY
KSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVDIIKNYIQEQGEKDEKEKRSKKQSNKIQIISND

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18038; Mature: 18038

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDH
CEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCE
VHILFKAEPKSELSKFINAYKSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVD
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
IIKNYIQEQGEKDEKEKRSKKQSNKIQIISND
HHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MVLDTNNHSVFLLHYHLIMCVKYRNNVIDDEINEFLKSVFVKIQDRYCIKLEEFNHDKDH
CEEECCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCE
VHILFKAEPKSELSKFINAYKSASSRLVKKQYPRIRKSLYDEMFWSQSFCLLSTGGATVD
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
IIKNYIQEQGEKDEKEKRSKKQSNKIQIISND
HHHHHHHHCCCCCHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA