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The map label for this gene is ydeD [H]

Identifier: 169630841

GI number: 169630841

Start: 3820701

End: 3821753

Strand: Direct

Name: ydeD [H]

Synonym: MAB_3762

Alternate gene names: 169630841

Gene position: 3820701-3821753 (Clockwise)

Preceding gene: 169630839

Following gene: 169630842

Centisome position: 75.4

GC content: 64.67

Gene sequence:

>1053_bases
ATGAACGACAAGGCCAATTTCCGGGCCGGCGTGATTCTCGCCCTCGTGTCCGCCGCCACCTTCGGGTTCTCCGGGCCGTT
CGCCAAATCGCTCATGGCGGCGGGGTGGTCCCTCACCGCCGTGGTCACCGCCCGCCTCGCGACCGGCGCCGCCGTCATGG
TCGTGGCCGCCTGCATCGCGGCACCCGGATGGTTCTCCGAGGCCCGACGCCACGCCAAAGTTGTTGTGCTTTATGGAATC
ATTCCCGTCGCCGGCGCGCAGTTCTGCTACTTCGGCGCGGTCCGGCATATGTCGGTCGGGGTCGCGATGCTCCTGGAATT
CCTGAGCCCCATCCTGGTGATCGCCTGGACGTGGATGATCACGCGGCACCGTCCCCACACTCGGGTACTTGCCGGCGCAA
CCCTCGCCTTGTCGGGAATGCTGTTGGTGCTCAACATCTTCAGCGGGGGACGCGTGGAGCCCGTGGGAATCGCCTGGGGC
CTGGGGGCAGCGGTATGTGCCGCCTATTACTTCATCTCCTCACACCGGGCGGGCGGCAAGGCCGAAGAACTGCAACCCAT
CACGCTGGCAACGAGCGGGCTGCTCGTCGGAGCCGTCGCGGTGGGCGGCTTCGGGCTCACCGGGATCATGCCACTGACCT
TCTCCACCCAGGATGTGCATGTCGCCGGCTGGAATACGCCGGTATACGTACCCATCCTCGTTCTCGGCGTGGTGACCACC
GCGATCGCCTACATCACCGGTATCGCCGCCATCACCCGGCTCAGACCGAGCTACGCCTCATTGATAGCCCTTACCGAGGT
GCTGTGCGCGGTGATCGCGGGGTGGGTACTCCTCGGAGAGACCATCGCGCCCATCCAGTACGCCGGGGCCGCAGTCATTC
TCGCGGGGCTGATGTTGGCGCACCGAGGTTCGGATACACCCGGAGAGCCCGAATCCAGCGGAGCTGGACTCACGGCTTCG
CTACCTGCGGGATTGAAATCACATGGCGATGACAGCGAATTATCCGTAACCTCAGTATGTGACGCTACAACCGAATCCAC
GCCCAGCCAGTAA

Upstream 100 bases:

>100_bases
CTTGCTCCGTGTCATGAGTAAAAAGCATTTGACACCTGACACCCTTCGCCCTTACCGTCATGACCGTATCCAATTTTACT
CATGACATGCGGGAGGTGCG

Downstream 100 bases:

>100_bases
ATTGCTCACCGCCGCCGCCCGCGCGGCGGTTGTTTCGGTTGCGGCCATCATGTTGACCACCGGACTGGCGGTCGTCATCC
CCGCCACCGCATCGGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIAAPGWFSEARRHAKVVVLYGI
IPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWTWMITRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWG
LGAAVCAAYYFISSHRAGGKAEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGVVTT
AIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLAHRGSDTPGEPESSGAGLTAS
LPAGLKSHGDDSELSVTSVCDATTESTPSQ

Sequences:

>Translated_350_residues
MNDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIAAPGWFSEARRHAKVVVLYGI
IPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWTWMITRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWG
LGAAVCAAYYFISSHRAGGKAEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGVVTT
AIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLAHRGSDTPGEPESSGAGLTAS
LPAGLKSHGDDSELSVTSVCDATTESTPSQ
>Mature_350_residues
MNDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIAAPGWFSEARRHAKVVVLYGI
IPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWTWMITRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWG
LGAAVCAAYYFISSHRAGGKAEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGVVTT
AIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLAHRGSDTPGEPESSGAGLTAS
LPAGLKSHGDDSELSVTSVCDATTESTPSQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35932; Mature: 35932

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIA
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHC
APGWFSEARRHAKVVVLYGIIPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWTWMI
CCCCHHHHHHCCEEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWGLGAAVCAAYYFISSHRAGGK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC
AEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGVVTT
HHHCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHH
AIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHH
HRGSDTPGEPESSGAGLTASLPAGLKSHGDDSELSVTSVCDATTESTPSQ
HCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCEEHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDKANFRAGVILALVSAATFGFSGPFAKSLMAAGWSLTAVVTARLATGAAVMVVAACIA
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHC
APGWFSEARRHAKVVVLYGIIPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILVIAWTWMI
CCCCHHHHHHCCEEEEEEECHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRHRPHTRVLAGATLALSGMLLVLNIFSGGRVEPVGIAWGLGAAVCAAYYFISSHRAGGK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCC
AEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQDVHVAGWNTPVYVPILVLGVVTT
HHHCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHH
AIAYITGIAAITRLRPSYASLIALTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHH
HRGSDTPGEPESSGAGLTASLPAGLKSHGDDSELSVTSVCDATTESTPSQ
HCCCCCCCCCCCCCCCEEEECCCCHHCCCCCCCEEHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]