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The map label for this gene is yjeF [C]

Identifier: 169630820

GI number: 169630820

Start: 3794585

End: 3796021

Strand: Reverse

Name: yjeF [C]

Synonym: MAB_3741c

Alternate gene names: 169630820

Gene position: 3796021-3794585 (Counterclockwise)

Preceding gene: 169630821

Following gene: 169630819

Centisome position: 74.91

GC content: 69.24

Gene sequence:

>1437_bases
ATGCGGAACTACTACAGCGCCCAACAGATCAGGGAGGCCGAGGCGCCGCTGCTGGCCGCACTGCCCGACGGGGCGTTGAT
GCGGCGTGCCGCATACGGACTGGCCGCGGTGATCGCGGATGAGTTGTCGCGGCGTGCGGGTGTAGTGGCCGGGCGGAGTG
TCTGTGGTGTCGTGGGTTCCGGAGACAACGGGGGAGACGCCTTGTGGGCGTTGACCTTCCTGCGTCGGCGTGGCGTATCC
GCCAGTGCGGTGCTGCTGAACCCGGAACGGGCCCACCGCGCCGGACTGGCCGCCTTCCGCAAGGCCGGCGGGAGGGTGGT
GTCGGTTGTGCCTGATGACACCGACCTCGTCGTTGACGGCGTGGTGGGAATCTCCGGTACTGGCCCGCTGCGGCCCGGCG
CTGCCGCCGGTATCGCCGAGAAGATCACTGCCGAGGGCATACCGGTAATCGCGGTGGACATTCCCAGCGGCGTCGACGTG
CACACCGGGGCGGTCGATGGCCCGGCCTTCCGCGCGGCGGTCACGGTCACCTTCGGCGGATACAAACCCGTTCATGCCCT
TGGTGATTGCGGTGATGTGAGGCTCATCGACATCGGGCTGGAGCTGCCCGAATCGGCTTTGCGGGAGTTCGACGCCTCCG
ACGTGGCGGCCGCCTGGCCCGTTCCCGGGCCGGCCGATGATAAGTACACCCAGGGCGTCACCGGTGTGCTGGCCGGATCG
AGCACCTATCCCGGAGCGGCAGTGCTGTGTTCCGGTGCGGCCGTGGCGGCGACATCGGGGATGGTCCGCTACGCGGGAAC
AGCTGCTGCCGAAGTGGTTTCGCACTGGCCGGAAGTGATTGCCACGCAGACGGAGGAAGCCGCCGGCAGGGTGCAGGCGT
GGGTGATCGGTCCCGGGTACGGCACCGCCGAACGTCAGACGAGAACCCTGCGGCGAGTTCTTTCGACAAGCCTGCCCGTC
CTCGTCGACGCCGACGCCCTGACAATGCTGGCTGAGCATCCGGATCTGGCGGATCTGGTGGCATCGCGCCCGGCCGCCAC
GGTCCTGACCCCGCATGCCGGTGAATTCGCGCGGTTGGCGGGTGGGCCACCGGGACCTGATCGCGTCGATGCGGCACGGT
CGCTGGCCGTCCGGCTCAAGGCCACGGTCCTGCTCAAGGGCAACGTCACCGTCATCGCCCGGCCGGACGGCACCGCGTAT
GTGAACCGCGCGCACGGGTCATGGGCCGCGACCGCGGGTTCGGGCGACGTGCTCGCCGGTGTCATTGGGGCGCTGTTGTC
CGCCGGGATCGCGGCGGACAAGGCCGCCGCGATGGGGGCCTATGTGCACGCCCGTGCCGCCGCTGCTGCTGCCGCCGACC
CGGGTCCGGGTAAAGCGCCCATTTCGGCTTCTCGTCTTCTTGGACATCTGCGGTGGGCGATCGCCGAAATAGGGTGA

Upstream 100 bases:

>100_bases
TGCATGTTTGGCCTGACGCCTCGCACGCGCTCAATGGTGAGTTCCCGGGACGCATTTCTGAACTGACACACGAATTCCTG
GACACGGTGGAGGCCGCCTG

Downstream 100 bases:

>100_bases
GAATCGGTTTATGTCGAAATCCCGTGATCAGTTCCGTCTCTCGGCGCATGCCGGAAAGATCAATGCCTCCGCCTTCAGCC
CCGCGTACACCGGCAGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MRNYYSAQQIREAEAPLLAALPDGALMRRAAYGLAAVIADELSRRAGVVAGRSVCGVVGSGDNGGDALWALTFLRRRGVS
ASAVLLNPERAHRAGLAAFRKAGGRVVSVVPDDTDLVVDGVVGISGTGPLRPGAAAGIAEKITAEGIPVIAVDIPSGVDV
HTGAVDGPAFRAAVTVTFGGYKPVHALGDCGDVRLIDIGLELPESALREFDASDVAAAWPVPGPADDKYTQGVTGVLAGS
STYPGAAVLCSGAAVAATSGMVRYAGTAAAEVVSHWPEVIATQTEEAAGRVQAWVIGPGYGTAERQTRTLRRVLSTSLPV
LVDADALTMLAEHPDLADLVASRPAATVLTPHAGEFARLAGGPPGPDRVDAARSLAVRLKATVLLKGNVTVIARPDGTAY
VNRAHGSWAATAGSGDVLAGVIGALLSAGIAADKAAAMGAYVHARAAAAAAADPGPGKAPISASRLLGHLRWAIAEIG

Sequences:

>Translated_478_residues
MRNYYSAQQIREAEAPLLAALPDGALMRRAAYGLAAVIADELSRRAGVVAGRSVCGVVGSGDNGGDALWALTFLRRRGVS
ASAVLLNPERAHRAGLAAFRKAGGRVVSVVPDDTDLVVDGVVGISGTGPLRPGAAAGIAEKITAEGIPVIAVDIPSGVDV
HTGAVDGPAFRAAVTVTFGGYKPVHALGDCGDVRLIDIGLELPESALREFDASDVAAAWPVPGPADDKYTQGVTGVLAGS
STYPGAAVLCSGAAVAATSGMVRYAGTAAAEVVSHWPEVIATQTEEAAGRVQAWVIGPGYGTAERQTRTLRRVLSTSLPV
LVDADALTMLAEHPDLADLVASRPAATVLTPHAGEFARLAGGPPGPDRVDAARSLAVRLKATVLLKGNVTVIARPDGTAY
VNRAHGSWAATAGSGDVLAGVIGALLSAGIAADKAAAMGAYVHARAAAAAAADPGPGKAPISASRLLGHLRWAIAEIG
>Mature_478_residues
MRNYYSAQQIREAEAPLLAALPDGALMRRAAYGLAAVIADELSRRAGVVAGRSVCGVVGSGDNGGDALWALTFLRRRGVS
ASAVLLNPERAHRAGLAAFRKAGGRVVSVVPDDTDLVVDGVVGISGTGPLRPGAAAGIAEKITAEGIPVIAVDIPSGVDV
HTGAVDGPAFRAAVTVTFGGYKPVHALGDCGDVRLIDIGLELPESALREFDASDVAAAWPVPGPADDKYTQGVTGVLAGS
STYPGAAVLCSGAAVAATSGMVRYAGTAAAEVVSHWPEVIATQTEEAAGRVQAWVIGPGYGTAERQTRTLRRVLSTSLPV
LVDADALTMLAEHPDLADLVASRPAATVLTPHAGEFARLAGGPPGPDRVDAARSLAVRLKATVLLKGNVTVIARPDGTAY
VNRAHGSWAATAGSGDVLAGVIGALLSAGIAADKAAAMGAYVHARAAAAAAADPGPGKAPISASRLLGHLRWAIAEIG

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=429, Percent_Identity=31.9347319347319, Blast_Score=133, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17554656, Length=217, Percent_Identity=27.1889400921659, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 48174; Mature: 48174

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01050 UPF0031_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYYSAQQIREAEAPLLAALPDGALMRRAAYGLAAVIADELSRRAGVVAGRSVCGVVGS
CCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEC
GDNGGDALWALTFLRRRGVSASAVLLNPERAHRAGLAAFRKAGGRVVSVVPDDTDLVVDG
CCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE
VVGISGTGPLRPGAAAGIAEKITAEGIPVIAVDIPSGVDVHTGAVDGPAFRAAVTVTFGG
EEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCEEEEEEEEECC
YKPVHALGDCGDVRLIDIGLELPESALREFDASDVAAAWPVPGPADDKYTQGVTGVLAGS
CCCHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHCCCEEEEECC
STYPGAAVLCSGAAVAATSGMVRYAGTAAAEVVSHWPEVIATQTEEAAGRVQAWVIGPGY
CCCCCHHEEECCCHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCC
GTAERQTRTLRRVLSTSLPVLVDADALTMLAEHPDLADLVASRPAATVLTPHAGEFARLA
CCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCHHHHC
GGPPGPDRVDAARSLAVRLKATVLLKGNVTVIARPDGTAYVNRAHGSWAATAGSGDVLAG
CCCCCCHHHHHHHHHEEEEEEEEEEECCEEEEECCCCCEEEEECCCCEEEECCCCHHHHH
VIGALLSAGIAADKAAAMGAYVHARAAAAAAADPGPGKAPISASRLLGHLRWAIAEIG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNYYSAQQIREAEAPLLAALPDGALMRRAAYGLAAVIADELSRRAGVVAGRSVCGVVGS
CCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEC
GDNGGDALWALTFLRRRGVSASAVLLNPERAHRAGLAAFRKAGGRVVSVVPDDTDLVVDG
CCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE
VVGISGTGPLRPGAAAGIAEKITAEGIPVIAVDIPSGVDVHTGAVDGPAFRAAVTVTFGG
EEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCEEEEEEEEECC
YKPVHALGDCGDVRLIDIGLELPESALREFDASDVAAAWPVPGPADDKYTQGVTGVLAGS
CCCHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCCEEECCCCCCCCCCHHCCCEEEEECC
STYPGAAVLCSGAAVAATSGMVRYAGTAAAEVVSHWPEVIATQTEEAAGRVQAWVIGPGY
CCCCCHHEEECCCHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEECCC
GTAERQTRTLRRVLSTSLPVLVDADALTMLAEHPDLADLVASRPAATVLTPHAGEFARLA
CCHHHHHHHHHHHHHCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCHHHHC
GGPPGPDRVDAARSLAVRLKATVLLKGNVTVIARPDGTAYVNRAHGSWAATAGSGDVLAG
CCCCCCHHHHHHHHHEEEEEEEEEEECCEEEEECCCCCEEEEECCCCEEEECCCCHHHHH
VIGALLSAGIAADKAAAMGAYVHARAAAAAAADPGPGKAPISASRLLGHLRWAIAEIG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]