| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630778
Identifier: 169630778
GI number: 169630778
Start: 3753504
End: 3754058
Strand: Reverse
Name: 169630778
Synonym: MAB_3699c
Alternate gene names: NA
Gene position: 3754058-3753504 (Counterclockwise)
Preceding gene: 169630779
Following gene: 169630775
Centisome position: 74.09
GC content: 63.78
Gene sequence:
>555_bases ATGGCCGAGCACTGGACAGATCGTGAGATCACCGCAGAGACCTTCTACGACGAGGACTTTCGCGAACTGCACACCGAGCG TGTGGTTTTCACGGAATGCGATTTCAGCGGAGCCAATCTCACCGAGTCGCTGCACGTCGGCTCGGCCTTCCGGAACTGCA CCTTCCGGCGCACCTCGCTATGGCATTCGGAGTTCCGGCAATGCAGCCTGCTGGGCTCCACGTTCACCGATTGTCGGGTG CGGCCGTCGAAGTTCACCGAAACCGACTTCACGCTGTCTTCGCTCGCTGGGCTCGATCTGCGCGAGATGGATCTGTCGGA CTGCCGTTTCCGTGAGGCCAACCTGGTGGGCGCCGATATGCGCAAGGCAAACCTGCATGGCGCCGACTTCACCGGTGCCC GCACCCAGAACCTCAAACTCGACGGGGCCGATCTGCGTGGTGCGCGCATCGACCCGACGCTGTGGACCACCGCGGCCCTG ATCACCGCCAAAGTCGATCTGCCCCAGGCCATCGCGTTCGCCGCCGCGCACGGATTGGACGTGCACGGGGGCTAG
Upstream 100 bases:
>100_bases TGCGGTTCGGGCTGCATCAGCCCGCCCATGACACGGCCTGATCGAGCGGCACCTGCGGCGGCGTGGCCGCTCGTCGGACC CGACCGGCATGATGGCAGTC
Downstream 100 bases:
>100_bases ATGCCCCGGCGACGCTCAGCCCTTCAGGCGGATGCGCCAGCGTACGAACCCGGCCATCACCAGCGAGAGCAGCCCCAGGA TGCCCATATCGAACAGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; Low-Complexity Protein
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTESLHVGSAFRNCTFRRTSLWHSEFRQCSLLGSTFTDCRV RPSKFTETDFTLSSLAGLDLREMDLSDCRFREANLVGADMRKANLHGADFTGARTQNLKLDGADLRGARIDPTLWTTAAL ITAKVDLPQAIAFAAAHGLDVHGG
Sequences:
>Translated_184_residues MAEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTESLHVGSAFRNCTFRRTSLWHSEFRQCSLLGSTFTDCRV RPSKFTETDFTLSSLAGLDLREMDLSDCRFREANLVGADMRKANLHGADFTGARTQNLKLDGADLRGARIDPTLWTTAAL ITAKVDLPQAIAFAAAHGLDVHGG >Mature_183_residues AEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTESLHVGSAFRNCTFRRTSLWHSEFRQCSLLGSTFTDCRVR PSKFTETDFTLSSLAGLDLREMDLSDCRFREANLVGADMRKANLHGADFTGARTQNLKLDGADLRGARIDPTLWTTAALI TAKVDLPQAIAFAAAHGLDVHGG
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20566; Mature: 20435
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTESLHVGSAFRNCTFRRTSL CCCCCCCCCEEHHHHCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHCHHHHCCEEHHHHH WHSEFRQCSLLGSTFTDCRVRPSKFTETDFTLSSLAGLDLREMDLSDCRFREANLVGADM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCC RKANLHGADFTGARTQNLKLDGADLRGARIDPTLWTTAALITAKVDLPQAIAFAAAHGLD HHCCCCCCCCCCCCCCEEEECCCCCCCCEECCHHHHHHHHEEEECCCCHHHHHHHHCCCC VHGG CCCC >Mature Secondary Structure AEHWTDREITAETFYDEDFRELHTERVVFTECDFSGANLTESLHVGSAFRNCTFRRTSL CCCCCCCCEEHHHHCCHHHHHHHHCEEEEEECCCCCCCCCHHHHHCHHHHCCEEHHHHH WHSEFRQCSLLGSTFTDCRVRPSKFTETDFTLSSLAGLDLREMDLSDCRFREANLVGADM HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCC RKANLHGADFTGARTQNLKLDGADLRGARIDPTLWTTAALITAKVDLPQAIAFAAAHGLD HHCCCCCCCCCCCCCCEEEECCCCCCCCEECCHHHHHHHHEEEECCCCHHHHHHHHCCCC VHGG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA