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The map label for this gene is yhjD [H]

Identifier: 169630761

GI number: 169630761

Start: 3735391

End: 3736419

Strand: Reverse

Name: yhjD [H]

Synonym: MAB_3682c

Alternate gene names: 169630761

Gene position: 3736419-3735391 (Counterclockwise)

Preceding gene: 169630762

Following gene: 169630758

Centisome position: 73.74

GC content: 64.43

Gene sequence:

>1029_bases
GTGGTGGCTGAAGACGACAAGCCTGGAATCCTTGACCGCTATCGCGCCAGATTTCCCTGGTTCGACCACATCATGCGCAT
GCAGGAGCGGTACGGGAAGGTAAACGGCAACTTCTTCGCCGCGGGAATCACATACTTCACCGTCTTCGCGCTGTTTCCGC
TCATGATGGTCGCCTTCGCCGTCATGGGGTTCGTGCTGTCGCGGCGGCCGGACACGATTGCGGAGCTACGCGGGCGCATC
AGCGGGGCCATCTCCGGCGAGGTGGGCAACCAGCTAATCAATTTGATGGACACGGCGATCGCCTCGCGCACGAGCCTGGG
TATCGCAGGTCTAGCCACCGCGGCCTGGGCCGGACTGGGCTGGATGGCCAACGTGCGGGCGGCGCTCAGTGCCATGTGGG
AACAGCCCAACGACTCGGAGAACTTCGTCAAGGGCAAGCTGTCGGATTTACTCGCGCTCGGTTCCACGTTTGTAGCGCTC
GCCCTCACCATCGCGGTGACCGCCGTCGGCGACGAGAAAACCATCCTGCGAATACTCGGCTGGATGGGACTGCATGACGT
CGCCATCCCGTCGGTTCTGTTGAAGGTCGTGACCATCGCGATAGCGACGGTGCTCTCGTGGGCGTTGTTCACCTGGATGA
TCGCGCGGCTGCCCCGGGAGCGGCTGCCGTTCTCGAGTTCGGTGCGGGCGGGGCTCATCGCGGCGATCGGTTTCGAGTTG
TTCAAACAGGTCGCCTCGATCTACCTGAGCGTGATCATGCACGGACCGGCAGGGTCCACGTTCGGGCCGGTACTGGGCAT
CATGGTGTTTGCCTACATCACGGCGCGTCTGCTGCTGTATGCCACCGCGTGGGCGGCCACCTCCGACGAGAACCGGCCAT
TGGCACACGTGCCGCCGCCCGAGCCCGTGGTCATCACCACCCGGGTCGAGACGGTCGAGCGGCCATCCAAGCTGGGAGTG
ATCGCCGCCTTCGGGGCGGGAGTCATCGGCGCGCTGGGGATTTCCTGGTTGGGGCGCGGCGGCGACTAA

Upstream 100 bases:

>100_bases
GCGGCGCGTGCCCGGGAGCTGGCGGAGAAGACTCTCACCGAGGTCTATGACCGGATAGGGTTTGTCCGGCCCGCGAGGTA
GTTAACAGCAGAGGCGGTGA

Downstream 100 bases:

>100_bases
GCCTGTCGGCGGTTGAGTGAGCGCGCCGCGAGGATGAGTCCGAACACGATCATCGCACCGATGATCGTCACGCCCACCCG
GACCGGGACGCTGTTGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVAEDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMGFVLSRRPDTIAELRGRI
SGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLGWMANVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVAL
ALTIAVTAVGDEKTILRILGWMGLHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFEL
FKQVASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENRPLAHVPPPEPVVITTRVETVERPSKLGV
IAAFGAGVIGALGISWLGRGGD

Sequences:

>Translated_342_residues
MVAEDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMGFVLSRRPDTIAELRGRI
SGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLGWMANVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVAL
ALTIAVTAVGDEKTILRILGWMGLHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFEL
FKQVASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENRPLAHVPPPEPVVITTRVETVERPSKLGV
IAAFGAGVIGALGISWLGRGGD
>Mature_342_residues
MVAEDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMGFVLSRRPDTIAELRGRI
SGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLGWMANVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVAL
ALTIAVTAVGDEKTILRILGWMGLHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFEL
FKQVASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENRPLAHVPPPEPVVITTRVETVERPSKLGV
IAAFGAGVIGALGISWLGRGGD

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=279, Percent_Identity=35.84229390681, Blast_Score=174, Evalue=9e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 36784; Mature: 36784

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAEDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFA
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VMGFVLSRRPDTIAELRGRISGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLG
HHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WMANVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVALALTIAVTAVGDEKTILRILG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WMGLHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFEL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
FKQVASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENRPLAHVPPP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EPVVITTRVETVERPSKLGVIAAFGAGVIGALGISWLGRGGD
CCEEEEEEHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVAEDDKPGILDRYRARFPWFDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFA
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHH
VMGFVLSRRPDTIAELRGRISGAISGEVGNQLINLMDTAIASRTSLGIAGLATAAWAGLG
HHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
WMANVRAALSAMWEQPNDSENFVKGKLSDLLALGSTFVALALTIAVTAVGDEKTILRILG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
WMGLHDVAIPSVLLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFEL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
FKQVASIYLSVIMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENRPLAHVPPP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
EPVVITTRVETVERPSKLGVIAAFGAGVIGALGISWLGRGGD
CCEEEEEEHHHHHCHHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]