| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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Identifier: 169630749
GI number: 169630749
Start: 3722990
End: 3724078
Strand: Reverse
Name: add
Synonym: MAB_3670c
Alternate gene names: 169630749
Gene position: 3724078-3722990 (Counterclockwise)
Preceding gene: 169630750
Following gene: 169630741
Centisome position: 73.49
GC content: 65.11
Gene sequence:
>1089_bases GTGACGGCCGAACTTGATTTGGTGTCAATCACCCAGGCTCCCAAAGCGCTACTGCATGATCATCTGGACGGGGGTTTGCG ACCAGGCACCGTCCTGGACCTAGCCCGCGAAACCGGGTACGAAAACCTGCCGGCGCAGGACGAAACCGCCCTGGCCTCAT GGTTCCGGACCGCCGCCGACAGTGGCTCGCTGGAGCAGTATCTGGAGACCTTTGCACACACGGTGGGTGTCATGCAGACG GCGTCCGCGCTGCATCGCGTGGCCGCCGAATGCGTCGAAGACCTCGCCGCCGATGGCGTGGTGTACGCCGAGGTCCGCTT TGCGCCGGAGCTGCACATCGACGCTGGCCTCACTCTTGACGACGTCATGGATGCCGTGCTGGCCGGGTTCGCCGACGGGG AGCGGCAAGCCAGTGCCGCGGGCAAGCGCATCAAGGTGCGTACCTTGGTCACCGCGATGCGGCACGCCGCGCGATCACGG GAGATCGCCGAGCTGGCCGTGAAGTTCCGCGACCGGGGTGCCGTCGGGTTCGACATCGCCGGCGCCGAGGCCGGATATCC GCCGACCCGTCATCTGGACGCCTTCGAGTACATGCGGAACGCCAACTCCCGGTTCACGATCCATGCCGGCGAGGGATTCG GATTGCCCTCGATCCATGAGGCGATCGCCTTCTGCGGTGCCGACCGGCTGGGCCACGGGGTGCGCATCGTCGACGACATC GACATCGGCCCCGACGGCACGGCACATTTGGGCAGACTCTCCTCGCTGCTGCGCGACAAGCGGGTGCCGTTAGAACTGTG CCCGAGTTCGAATGTGCAGACCGGTGCTGTCGAAAGCCTGGCCGACCATCCCTTCGATCTGCTGGCGCGATTGCGGTTCC GGGTGACGGTGAACACCGACAACCGGCTGATGAGCGACACCACGATGAGCCGCGAGATGCTGCGCCTGGTCGAGACGTTC GGGTACGGCTGGAGCGATCTGCAGCGATTCACCATCAACGCGATGAAGTCCGCCTTCATCCCGTTCGATGAGCGGTTGGC CATCATCGATGACGTGATCAAGCCCGGGTACGCGGTCCTGATCGGCTAG
Upstream 100 bases:
>100_bases CCCAGGAGCGATTGCCCGCCGCGCTCGACGCGCTGGAAGGTGGGTGGGAGATCGGTGCGGCACCGACCGCTACCCCCCTC ATCATCGATAGACTTCCGGT
Downstream 100 bases:
>100_bases CGGCGCACTATTCGCGCCGCAGCCGCGCCTCCATCGCCCGCTCCAGGGTGCGCCAACGTTCGGCGGCGTCGACGAACGGG CCCTTCGGTTCGTCGTGCTT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTAELDLVSITQAPKALLHDHLDGGLRPGTVLDLARETGYENLPAQDETALASWFRTAADSGSLEQYLETFAHTVGVMQT ASALHRVAAECVEDLAADGVVYAEVRFAPELHIDAGLTLDDVMDAVLAGFADGERQASAAGKRIKVRTLVTAMRHAARSR EIAELAVKFRDRGAVGFDIAGAEAGYPPTRHLDAFEYMRNANSRFTIHAGEGFGLPSIHEAIAFCGADRLGHGVRIVDDI DIGPDGTAHLGRLSSLLRDKRVPLELCPSSNVQTGAVESLADHPFDLLARLRFRVTVNTDNRLMSDTTMSREMLRLVETF GYGWSDLQRFTINAMKSAFIPFDERLAIIDDVIKPGYAVLIG
Sequences:
>Translated_362_residues MTAELDLVSITQAPKALLHDHLDGGLRPGTVLDLARETGYENLPAQDETALASWFRTAADSGSLEQYLETFAHTVGVMQT ASALHRVAAECVEDLAADGVVYAEVRFAPELHIDAGLTLDDVMDAVLAGFADGERQASAAGKRIKVRTLVTAMRHAARSR EIAELAVKFRDRGAVGFDIAGAEAGYPPTRHLDAFEYMRNANSRFTIHAGEGFGLPSIHEAIAFCGADRLGHGVRIVDDI DIGPDGTAHLGRLSSLLRDKRVPLELCPSSNVQTGAVESLADHPFDLLARLRFRVTVNTDNRLMSDTTMSREMLRLVETF GYGWSDLQRFTINAMKSAFIPFDERLAIIDDVIKPGYAVLIG >Mature_361_residues TAELDLVSITQAPKALLHDHLDGGLRPGTVLDLARETGYENLPAQDETALASWFRTAADSGSLEQYLETFAHTVGVMQTA SALHRVAAECVEDLAADGVVYAEVRFAPELHIDAGLTLDDVMDAVLAGFADGERQASAAGKRIKVRTLVTAMRHAARSRE IAELAVKFRDRGAVGFDIAGAEAGYPPTRHLDAFEYMRNANSRFTIHAGEGFGLPSIHEAIAFCGADRLGHGVRIVDDID IGPDGTAHLGRLSSLLRDKRVPLELCPSSNVQTGAVESLADHPFDLLARLRFRVTVNTDNRLMSDTTMSREMLRLVETFG YGWSDLQRFTINAMKSAFIPFDERLAIIDDVIKPGYAVLIG
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family
Homologues:
Organism=Homo sapiens, GI47078295, Length=360, Percent_Identity=29.4444444444444, Blast_Score=139, Evalue=4e-33, Organism=Escherichia coli, GI1787910, Length=343, Percent_Identity=30.9037900874636, Blast_Score=147, Evalue=7e-37, Organism=Caenorhabditis elegans, GI32565969, Length=355, Percent_Identity=29.8591549295775, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17538512, Length=355, Percent_Identity=29.8591549295775, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324188, Length=303, Percent_Identity=24.4224422442244, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24645260, Length=347, Percent_Identity=25.6484149855908, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ADD_MYCA9 (B1MFZ9)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001704398.1 - ProteinModelPortal: B1MFZ9 - SMR: B1MFZ9 - EnsemblBacteria: EBMYCT00000005781 - GeneID: 5966168 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_3670c - GeneTree: EBGT00050000016615 - HOGENOM: HBG630382 - OMA: PYYMAMN - ProtClustDB: PRK09358 - BioCyc: MABS561007:MAB_3670C-MONOMER - HAMAP: MF_00540 - InterPro: IPR001365 - InterPro: IPR006330 - PANTHER: PTHR11409 - TIGRFAMs: TIGR01430
Pfam domain/function: PF00962 A_deaminase
EC number: =3.5.4.4
Molecular weight: Translated: 39375; Mature: 39244
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00485 A_DEAMINASE
Important sites: ACT_SITE 211-211 BINDING 21-21 BINDING 23-23 BINDING 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAELDLVSITQAPKALLHDHLDGGLRPGTVLDLARETGYENLPAQDETALASWFRTAAD CCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC SGSLEQYLETFAHTVGVMQTASALHRVAAECVEDLAADGVVYAEVRFAPELHIDAGLTLD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECCCCCHH DVMDAVLAGFADGERQASAAGKRIKVRTLVTAMRHAARSREIAELAVKFRDRGAVGFDIA HHHHHHHHHCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC GAEAGYPPTRHLDAFEYMRNANSRFTIHAGEGFGLPSIHEAIAFCGADRLGHGVRIVDDI CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCHHHHCCCEEEEEEC DIGPDGTAHLGRLSSLLRDKRVPLELCPSSNVQTGAVESLADHPFDLLARLRFRVTVNTD CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCHHHHHHEEEEEEECCC NRLMSDTTMSREMLRLVETFGYGWSDLQRFTINAMKSAFIPFDERLAIIDDVIKPGYAVL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE IG EC >Mature Secondary Structure TAELDLVSITQAPKALLHDHLDGGLRPGTVLDLARETGYENLPAQDETALASWFRTAAD CCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC SGSLEQYLETFAHTVGVMQTASALHRVAAECVEDLAADGVVYAEVRFAPELHIDAGLTLD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECCCCCHH DVMDAVLAGFADGERQASAAGKRIKVRTLVTAMRHAARSREIAELAVKFRDRGAVGFDIA HHHHHHHHHCCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC GAEAGYPPTRHLDAFEYMRNANSRFTIHAGEGFGLPSIHEAIAFCGADRLGHGVRIVDDI CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCHHHHCCCEEEEEEC DIGPDGTAHLGRLSSLLRDKRVPLELCPSSNVQTGAVESLADHPFDLLARLRFRVTVNTD CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCCHHHHHHEEEEEEECCC NRLMSDTTMSREMLRLVETFGYGWSDLQRFTINAMKSAFIPFDERLAIIDDVIKPGYAVL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEE IG EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA