| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630746
Identifier: 169630746
GI number: 169630746
Start: 3719522
End: 3720496
Strand: Direct
Name: 169630746
Synonym: MAB_3667
Alternate gene names: NA
Gene position: 3719522-3720496 (Clockwise)
Preceding gene: 169630745
Following gene: 169630747
Centisome position: 73.4
GC content: 64.92
Gene sequence:
>975_bases GTGGCGCGCGAGTGGCTGCTCCTGGAAACACTCGGTGACGAGCCAACTGTCATCGCATCCGGCAGCCAGCCACGGAACAT GGTGCCCCTGAGCACATTCCTGCGCCGCAATCGTAATCTCGGCCTGCTTCGCCGAGTCATCACCGCCGCGACAAAAGCAA ACAAGGCCCTCACCATCGGCCCACCCGATTCGGACTCGGTCATCGACGTCCGCCCGGTCGCCATGCCCGACGGCAGGGTG CACGGCGTATGGCTGTGGACGGGATCGACGGCGCCTCACACCGTCCCGCCCGCCGAGGGCGGTGCGGTGGTTCTCAACGC CGATACCGGCGTCCTGCGCATCAGCGACGGCGCCGCGTTGGCCATGGGAATCGCCGCGGACGAACCACACGACGAAATAA GCATGCCCGAGCTCTACCGCTATCTTTCGCCCAATCCCGGCGAGACGGACGTCCTCGGGCTGATCGTCACCGCGACGGAG GGCATGACCTACAGCGCCACCTGGCCCGGCGTGGACAGCGACGGAAAGCCCACGTTGTGCCACTTCGCAAGCCGGCTGGT GCTGGAGCCCAATGGTGACGGCGTCCCCGAGCGTCTGGGGCGCGCGATCAACTTGCGAGTGGGCCAACCTGCCCCGCCGG TACCGCTGCTCGAACAACAAGTCCTCGAAGCCGCCAGCGAACCTGGCGCGTATCGCGCCCTGGTCATGATCGCGTCACGC AAGTTACTCAAGTGGATCGATCCGCCTGCGCCCGAATGGCATTGGGAGTTCGACCCACTAGGCCGCGCGAAAGTTCACCC CGACGATGAGGCGAACCTGAACTTCATGATCGACAACTCCGTCTTCGGCGCCACCGAGGCAGTGATCAGGTTCCGTTGCC ATGACGACAGCTGGGAATCACTGCACTGCGCCACCCAAGTGGTCCGCCTCAACGAGAATGCGACCGTCGCACTGATCACC TTGCGTCGCCGTTAG
Upstream 100 bases:
>100_bases TCTGACCTGGTCTTCGCAACCTTTTGGGAATACTGGGCCCCCTTGCCCAGCGGGCGGCGCTGCCGGATCGGCGCATGTCC TGCGCTGATAGCATCCGAAT
Downstream 100 bases:
>100_bases CCGACCACACCGGGCCGAAATAAGGGACCGCGCGACGTCGCCGAAAATTGCTAACATCCGCGCATGTCACGCGATTGGAT GCTGCTAGAGACCCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAREWLLLETLGDEPTVIASGSQPRNMVPLSTFLRRNRNLGLLRRVITAATKANKALTIGPPDSDSVIDVRPVAMPDGRV HGVWLWTGSTAPHTVPPAEGGAVVLNADTGVLRISDGAALAMGIAADEPHDEISMPELYRYLSPNPGETDVLGLIVTATE GMTYSATWPGVDSDGKPTLCHFASRLVLEPNGDGVPERLGRAINLRVGQPAPPVPLLEQQVLEAASEPGAYRALVMIASR KLLKWIDPPAPEWHWEFDPLGRAKVHPDDEANLNFMIDNSVFGATEAVIRFRCHDDSWESLHCATQVVRLNENATVALIT LRRR
Sequences:
>Translated_324_residues MAREWLLLETLGDEPTVIASGSQPRNMVPLSTFLRRNRNLGLLRRVITAATKANKALTIGPPDSDSVIDVRPVAMPDGRV HGVWLWTGSTAPHTVPPAEGGAVVLNADTGVLRISDGAALAMGIAADEPHDEISMPELYRYLSPNPGETDVLGLIVTATE GMTYSATWPGVDSDGKPTLCHFASRLVLEPNGDGVPERLGRAINLRVGQPAPPVPLLEQQVLEAASEPGAYRALVMIASR KLLKWIDPPAPEWHWEFDPLGRAKVHPDDEANLNFMIDNSVFGATEAVIRFRCHDDSWESLHCATQVVRLNENATVALIT LRRR >Mature_323_residues AREWLLLETLGDEPTVIASGSQPRNMVPLSTFLRRNRNLGLLRRVITAATKANKALTIGPPDSDSVIDVRPVAMPDGRVH GVWLWTGSTAPHTVPPAEGGAVVLNADTGVLRISDGAALAMGIAADEPHDEISMPELYRYLSPNPGETDVLGLIVTATEG MTYSATWPGVDSDGKPTLCHFASRLVLEPNGDGVPERLGRAINLRVGQPAPPVPLLEQQVLEAASEPGAYRALVMIASRK LLKWIDPPAPEWHWEFDPLGRAKVHPDDEANLNFMIDNSVFGATEAVIRFRCHDDSWESLHCATQVVRLNENATVALITL RRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35255; Mature: 35123
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREWLLLETLGDEPTVIASGSQPRNMVPLSTFLRRNRNLGLLRRVITAATKANKALTIG CCCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEC PPDSDSVIDVRPVAMPDGRVHGVWLWTGSTAPHTVPPAEGGAVVLNADTGVLRISDGAAL CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCEE AMGIAADEPHDEISMPELYRYLSPNPGETDVLGLIVTATEGMTYSATWPGVDSDGKPTLC EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHH HFASRLVLEPNGDGVPERLGRAINLRVGQPAPPVPLLEQQVLEAASEPGAYRALVMIASR HHCCEEEECCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHEEHHHHHHH KLLKWIDPPAPEWHWEFDPLGRAKVHPDDEANLNFMIDNSVFGATEAVIRFRCHDDSWES HHHHHCCCCCCCCEECCCCCCCCEECCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCHH LHCATQVVRLNENATVALITLRRR HHHEEEEEEECCCCEEEEEEEECC >Mature Secondary Structure AREWLLLETLGDEPTVIASGSQPRNMVPLSTFLRRNRNLGLLRRVITAATKANKALTIG CCCEEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEC PPDSDSVIDVRPVAMPDGRVHGVWLWTGSTAPHTVPPAEGGAVVLNADTGVLRISDGAAL CCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCEE AMGIAADEPHDEISMPELYRYLSPNPGETDVLGLIVTATEGMTYSATWPGVDSDGKPTLC EEEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHH HFASRLVLEPNGDGVPERLGRAINLRVGQPAPPVPLLEQQVLEAASEPGAYRALVMIASR HHCCEEEECCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHEEHHHHHHH KLLKWIDPPAPEWHWEFDPLGRAKVHPDDEANLNFMIDNSVFGATEAVIRFRCHDDSWES HHHHHCCCCCCCCEECCCCCCCCEECCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCHH LHCATQVVRLNENATVALITLRRR HHHEEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA