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The map label for this gene is ydcJ [C]

Identifier: 169630727

GI number: 169630727

Start: 3696885

End: 3698192

Strand: Direct

Name: ydcJ [C]

Synonym: MAB_3648

Alternate gene names: 169630727

Gene position: 3696885-3698192 (Clockwise)

Preceding gene: 169630724

Following gene: 169630728

Centisome position: 72.96

GC content: 65.21

Gene sequence:

>1308_bases
ATGACCGCCCTGGTGCAGCGCTGGGAGCTCCGCGCCCGCTTCGCCGGGGCGCTCTCGCAGATGTACGGGACAGAGGTTCC
CGCGTACAACACCTTGGTGGAGGTGAGCACCGCGGTAAACCAGACTTACGCCACAACGCATCCGGATGCCGAGCGTCTCG
GGTCCATCCAGCGTGTGACCGCGGAACGCCATGGGGCGATTCGGGTGGGCAGCCCCCGCGAACTGGCTGCCGTTGCCGAT
CTATTCGAGGCGTTCGGGATGTATCCCGTCGACTTCTATGACTTGCGTGATGCCGCGTCGCCCGTGCCGGTGGTCTCCAC
CGCATTCCGGCCGATCGATGAAAATGAGCTGGCGCTCAACCCCTTCCGGGTATTCACGTCGATGCTGGCCACCGCCGATC
GCCGTTTCTTCGACCCGGACTTGCGTGGGCGGGTGGAGAATTTCGTGAGACAACGAGAGCTGTTCGACCCGGCGCTGCTC
GCCCACGCACGGCTGATCAGCGCAGCGGGCGGCTCCACGCCGGCACAGGCCGATGACTTCATCGCAGAGGCTGTCAACGC
CTTCGCATTGTCGTCGGCGCCCATCGACCGCGCTTGGTACGACGAACTTTCCGCGGTTTCCCCGGTCGCCGCTGATATCG
CTGGGGTGGCCCGCACACATATCAACCACCTCACCCCGCGGGTGCTCGATATCGATGATCTCTACCGCCGAATGACCGCA
CGCGGCGTCACCATGATCGAGGCGATCCAGGGCCCACCCCGCTGGCACGGGCCCGAGGTCCTGCTGCGGCAGACATCGTT
CCGGGCATTGGCTGAGCCGCGATGTTTCCGCATGAGTGACGGTTCGGTGGGAAGCGACACGCTGCGGGTGCGATTCGGCG
AGGTCGAGGCCCGGGGCATTGCGCTCACTCCCGCGGGCCGCGGTCGCTACGACGACGCCGTGGCCGCCATCGACACCGCT
CAGGCAGATCCCGAACAGGCCGCGTCCATGTGGGCCAGCTATTTTCCTGACACCGAGGCCGGACTCGATGAGCAGGGACT
CGCATACTTCCGCACCGAAATGGCCCCCGGAGGACAAATCGTGCGCAGCCCCATCGTGTACGAGGACTTCCTGCCACGCT
CAGCCGCCGGCATCTTCCGGTCAAACCTCGATGGCGACGGCGCATATGGAGACGGTGCCGATGAATCGGTCACCGCCTAC
TCGAAGGAATGGATGTCCGGCGCCATCGGCCGGGAGATCCACGATCCATATGCGCTGTACGCCGCTATCGCCGCACAATC
CGATCTCACGACAGGAGCGACCCGATGA

Upstream 100 bases:

>100_bases
TCCTCTCGGAATCCACAGTCACGGGGGCAGAGTACCGCGACCAGGCAGAACAAGGAACGGACTTGCACAGGCCAATCGCC
TCAACTCAGGGACGAATTCG

Downstream 100 bases:

>100_bases
CCACGACACTGCCTGCCCCCTCCCCTGGCGTACTGCCATCGGCCGACGAATTGCGCACCAGGGCGCAGAACGCACTCCGC
TGGATCGGTGCGGACGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVTAERHGAIRVGSPRELAAVAD
LFEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPDLRGRVENFVRQRELFDPALL
AHARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRAWYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTA
RGVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEARGIALTPAGRGRYDDAVAAIDTA
QADPEQAASMWASYFPDTEAGLDEQGLAYFRTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAY
SKEWMSGAIGREIHDPYALYAAIAAQSDLTTGATR

Sequences:

>Translated_435_residues
MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVTAERHGAIRVGSPRELAAVAD
LFEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPDLRGRVENFVRQRELFDPALL
AHARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRAWYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTA
RGVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEARGIALTPAGRGRYDDAVAAIDTA
QADPEQAASMWASYFPDTEAGLDEQGLAYFRTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAY
SKEWMSGAIGREIHDPYALYAAIAAQSDLTTGATR
>Mature_434_residues
TALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVTAERHGAIRVGSPRELAAVADL
FEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALNPFRVFTSMLATADRRFFDPDLRGRVENFVRQRELFDPALLA
HARLISAAGGSTPAQADDFIAEAVNAFALSSAPIDRAWYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTAR
GVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEARGIALTPAGRGRYDDAVAAIDTAQ
ADPEQAASMWASYFPDTEAGLDEQGLAYFRTEMAPGGQIVRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAYS
KEWMSGAIGREIHDPYALYAAIAAQSDLTTGATR

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydcJ [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=451, Percent_Identity=38.8026607538803, Blast_Score=274, Evalue=8e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 47393; Mature: 47262

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AERHGAIRVGSPRELAAVADLFEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALN
HHHCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
PFRVFTSMLATADRRFFDPDLRGRVENFVRQRELFDPALLAHARLISAAGGSTPAQADDF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH
IAEAVNAFALSSAPIDRAWYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTA
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHH
RGVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEARGI
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCEEECCE
ALTPAGRGRYDDAVAAIDTAQADPEQAASMWASYFPDTEAGLDEQGLAYFRTEMAPGGQI
EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHH
VRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAYSKEWMSGAIGREIHDPYALY
HHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCHHHHH
AAIAAQSDLTTGATR
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
TALVQRWELRARFAGALSQMYGTEVPAYNTLVEVSTAVNQTYATTHPDAERLGSIQRVT
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AERHGAIRVGSPRELAAVADLFEAFGMYPVDFYDLRDAASPVPVVSTAFRPIDENELALN
HHHCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
PFRVFTSMLATADRRFFDPDLRGRVENFVRQRELFDPALLAHARLISAAGGSTPAQADDF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH
IAEAVNAFALSSAPIDRAWYDELSAVSPVAADIAGVARTHINHLTPRVLDIDDLYRRMTA
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHH
RGVTMIEAIQGPPRWHGPEVLLRQTSFRALAEPRCFRMSDGSVGSDTLRVRFGEVEARGI
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCEEECCE
ALTPAGRGRYDDAVAAIDTAQADPEQAASMWASYFPDTEAGLDEQGLAYFRTEMAPGGQI
EECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHH
VRSPIVYEDFLPRSAAGIFRSNLDGDGAYGDGADESVTAYSKEWMSGAIGREIHDPYALY
HHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCHHHHH
AAIAAQSDLTTGATR
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]