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The map label for this gene is ygdK [C]

Identifier: 169630721

GI number: 169630721

Start: 3691487

End: 3691897

Strand: Direct

Name: ygdK [C]

Synonym: MAB_3642

Alternate gene names: 169630721

Gene position: 3691487-3691897 (Clockwise)

Preceding gene: 169630720

Following gene: 169630722

Centisome position: 72.85

GC content: 64.72

Gene sequence:

>411_bases
GTGACACTCCCCGCAGAGCTCGCCGAGATCGTCGCCGACTTCAAAGCCGTCGACGGCCAGGACAAGCTGCAGCTGTTGCT
GGAGTTTTCGAGCGAACTGCCCGAGCTGCCATCGCATTTAGAGCAGGCCGCGATGGAACCCGTGCCGGAGTGCCAATCAC
CGTTGTTCCTGGATGTCGACGCCAGCGACCGCACTGAGGTCCACCTGTACTTCAGCGCACCCGCCGAGGCCCCGACCACG
CGCGGGTTCGCCTCGATCCTGCAGCAGGGTCTCGACGGCCAGTCGGCCGACGCGATCCTGGCGGTGCCCGACGACTTCTA
TGCCGACCTCGGATTGGCCGCGTTGATCAGCCCGCTGCGGCTGCGCGGGATGTCGGCGATGTTGACTCGTATCAAGCGAA
GACTGTCCTAA

Upstream 100 bases:

>100_bases
TCCGCAACTACGACGGGTCCTGGACCGAATGGGGCAACCGGGTACGGACACCGATCGTCAAGGGCGACAAGCCCGGCGCC
GTACCCACCCAATAAACGCC

Downstream 100 bases:

>100_bases
AGCTACTCACCAGTAGGTAAAAACAGGGGCGGCACACCCCATCCCCGATGTGTGTTTGACGCCACGGATGCATAAACTCA
CTGCCGAGACTTTAAGAAAT

Product: putative SufE-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVDASDRTEVHLYFSAPAEAPTT
RGFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLRLRGMSAMLTRIKRRLS

Sequences:

>Translated_136_residues
MTLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVDASDRTEVHLYFSAPAEAPTT
RGFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLRLRGMSAMLTRIKRRLS
>Mature_135_residues
TLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVDASDRTEVHLYFSAPAEAPTTR
GFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLRLRGMSAMLTRIKRRLS

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 14768; Mature: 14637

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVD
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEC
ASDRTEVHLYFSAPAEAPTTRGFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLR
CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
LRGMSAMLTRIKRRLS
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLPAELAEIVADFKAVDGQDKLQLLLEFSSELPELPSHLEQAAMEPVPECQSPLFLDVD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEC
ASDRTEVHLYFSAPAEAPTTRGFASILQQGLDGQSADAILAVPDDFYADLGLAALISPLR
CCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
LRGMSAMLTRIKRRLS
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]