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The map label for this gene is yngJ [H]

Identifier: 169630715

GI number: 169630715

Start: 3685324

End: 3686586

Strand: Reverse

Name: yngJ [H]

Synonym: MAB_3636c

Alternate gene names: 169630715

Gene position: 3686586-3685324 (Counterclockwise)

Preceding gene: 169630716

Following gene: 169630714

Centisome position: 72.75

GC content: 63.02

Gene sequence:

>1263_bases
ATGAACTTCGAACTGCCGCCCGAACTCGTCGATTATCTGGCAGAGCTCGACGGATTCATCGACCGTGAGATCGTGCCGCT
CGAGCAGGCCGATGACAACATCCGATTCTTCGACCACCGGCGAGAAGATTCTCGAACCGATTGGGAGCGTGGCGGTCTGC
CCAACAGAGAATGGGAGGCGTTGCTCGGCGAGGCACGCAGGCGCGCGGACGTGGCGGGGCACTTTCGGTATCCCTTTCCC
GCGGAATTCGGCGGACGGGACGGATCCAACCTCGGTATGGCGGTCATTCGCGAACACCTGGCACGGCGTGGCCTGGGATT
GCACTGTGACCTGCAGAACGAACACGCCATCGTCGGCAACAACGTGGGCCTGCTGCTCATGTTGGAGTACGGCTCGGACG
AGCAGAAGGCCGCGTGGGTGGAGGGGCTCGCCGGCGGCACCAAGGTGTTCGCGTTCGGCATCACCGAACCCGAACACGGC
TCCGATGCCACGTACATGGAAACCCGTGCGGTCAAGGATGGGCCGGACTGGGTGATCAACGGTGAGAAGACCTGGAACAC
CGGGGTGCACGTCGCCGACGCCGACCTGATATTCGCACGTACCTCGGGTGAGCCTGGTGACGGCCGTGGTATCACAGCCT
TCCTGGTACCTGCGGACGCCCCAGGCTTCAAGGTCGAGGAATACCTCTGGACTTTCAACATGCCGACCGACCACGCCCAC
GTATCGCTGACCGACGTGCGAGTACCGGACGCCGCGATCTTCGGCGGGGAGGGGCGCGGCCTGGGGGTGGTACAGCACTT
CTTCAACGAGAACCGCATCCGGCAGGCCGCCTCCAGCCTTGGTGCGGCGCAGTTCTGTATCGACAGGTCCGTTGCGTACG
CCAAGGAACGCAGGCCCTTTGGGAAGGCGCTGGCGTCCAACCAGGCCATCCAGTTTCCGCTCGTCGAGCTGCAGACGCAG
TGCGAGATGCTGCGGGCCCTGATCCACAAGACCGCCTGGTCCATGGACACCTATGGCCCCTTCTCCGTCTCCGAGCAGGT
CTCGATGTGCAATTACGTGGCCAACCGGTTGTGCTGTGAGGCCGCCGACCGGGCCATGCAGGTGCACGGCGGAATGGGCT
ATTCGCGGCATATGCCGTTCGAGCACATCTACCGACACCATCGGCGTTACCGGATCACGGAGGGCGCCGAGGAGATTCAG
ATGCGTAGGGTAGCCGGGTACATGTTCGGTTTCATGAGTCAAAAGGCACCCAAGGGGGTTTAG

Upstream 100 bases:

>100_bases
GCGTACGGGACATCGTGATGGCCGCCAGCGGCCGGCGGATACCCGAGATCGAATGGGACTTGCTGATGTTGACCAAGCCG
TCGGAGCGGGAAGGAACGAG

Downstream 100 bases:

>100_bases
TGGCACAGGCGTCGCCGCCCGTCGTGGTCGTCATGGGCGTGGCAGGAGCGGGCAAGACGACGGTCGCCCGGCTGTTGGCG
CAGCGGTTGGATGCTCCTTA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MNFELPPELVDYLAELDGFIDREIVPLEQADDNIRFFDHRREDSRTDWERGGLPNREWEALLGEARRRADVAGHFRYPFP
AEFGGRDGSNLGMAVIREHLARRGLGLHCDLQNEHAIVGNNVGLLLMLEYGSDEQKAAWVEGLAGGTKVFAFGITEPEHG
SDATYMETRAVKDGPDWVINGEKTWNTGVHVADADLIFARTSGEPGDGRGITAFLVPADAPGFKVEEYLWTFNMPTDHAH
VSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIRQAASSLGAAQFCIDRSVAYAKERRPFGKALASNQAIQFPLVELQTQ
CEMLRALIHKTAWSMDTYGPFSVSEQVSMCNYVANRLCCEAADRAMQVHGGMGYSRHMPFEHIYRHHRRYRITEGAEEIQ
MRRVAGYMFGFMSQKAPKGV

Sequences:

>Translated_420_residues
MNFELPPELVDYLAELDGFIDREIVPLEQADDNIRFFDHRREDSRTDWERGGLPNREWEALLGEARRRADVAGHFRYPFP
AEFGGRDGSNLGMAVIREHLARRGLGLHCDLQNEHAIVGNNVGLLLMLEYGSDEQKAAWVEGLAGGTKVFAFGITEPEHG
SDATYMETRAVKDGPDWVINGEKTWNTGVHVADADLIFARTSGEPGDGRGITAFLVPADAPGFKVEEYLWTFNMPTDHAH
VSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIRQAASSLGAAQFCIDRSVAYAKERRPFGKALASNQAIQFPLVELQTQ
CEMLRALIHKTAWSMDTYGPFSVSEQVSMCNYVANRLCCEAADRAMQVHGGMGYSRHMPFEHIYRHHRRYRITEGAEEIQ
MRRVAGYMFGFMSQKAPKGV
>Mature_420_residues
MNFELPPELVDYLAELDGFIDREIVPLEQADDNIRFFDHRREDSRTDWERGGLPNREWEALLGEARRRADVAGHFRYPFP
AEFGGRDGSNLGMAVIREHLARRGLGLHCDLQNEHAIVGNNVGLLLMLEYGSDEQKAAWVEGLAGGTKVFAFGITEPEHG
SDATYMETRAVKDGPDWVINGEKTWNTGVHVADADLIFARTSGEPGDGRGITAFLVPADAPGFKVEEYLWTFNMPTDHAH
VSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIRQAASSLGAAQFCIDRSVAYAKERRPFGKALASNQAIQFPLVELQTQ
CEMLRALIHKTAWSMDTYGPFSVSEQVSMCNYVANRLCCEAADRAMQVHGGMGYSRHMPFEHIYRHHRRYRITEGAEEIQ
MRRVAGYMFGFMSQKAPKGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=340, Percent_Identity=34.4117647058824, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI4557231, Length=344, Percent_Identity=31.1046511627907, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI187960098, Length=344, Percent_Identity=31.1046511627907, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI4501859, Length=331, Percent_Identity=31.7220543806647, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI38505218, Length=403, Percent_Identity=28.0397022332506, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI21361497, Length=405, Percent_Identity=28.3950617283951, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI4501857, Length=379, Percent_Identity=26.9129287598945, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI7656849, Length=353, Percent_Identity=29.4617563739377, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI48976061, Length=286, Percent_Identity=29.020979020979, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI211971008, Length=286, Percent_Identity=29.020979020979, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI226958412, Length=335, Percent_Identity=26.5671641791045, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=26.5671641791045, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4557235, Length=344, Percent_Identity=27.906976744186, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI76496475, Length=344, Percent_Identity=27.906976744186, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI7669494, Length=277, Percent_Identity=30.3249097472924, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4503943, Length=262, Percent_Identity=30.9160305343511, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI87081958, Length=291, Percent_Identity=29.2096219931272, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786223, Length=360, Percent_Identity=25.5555555555556, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=351, Percent_Identity=32.4786324786325, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI17569725, Length=356, Percent_Identity=30.3370786516854, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17570075, Length=417, Percent_Identity=25.6594724220624, Blast_Score=161, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17505929, Length=333, Percent_Identity=30.9309309309309, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17506239, Length=330, Percent_Identity=29.0909090909091, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17508101, Length=343, Percent_Identity=28.8629737609329, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI71985184, Length=335, Percent_Identity=30.7462686567164, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI17551932, Length=364, Percent_Identity=28.2967032967033, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17533517, Length=360, Percent_Identity=28.6111111111111, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17538396, Length=400, Percent_Identity=26.25, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=288, Percent_Identity=28.8194444444444, Blast_Score=121, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71990804, Length=259, Percent_Identity=30.1158301158301, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71985192, Length=300, Percent_Identity=28.6666666666667, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=30.2127659574468, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71982178, Length=224, Percent_Identity=31.6964285714286, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17534353, Length=308, Percent_Identity=26.2987012987013, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24660351, Length=334, Percent_Identity=31.437125748503, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24666513, Length=333, Percent_Identity=32.1321321321321, Blast_Score=152, Evalue=3e-37,
Organism=Drosophila melanogaster, GI21356377, Length=392, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24646207, Length=282, Percent_Identity=32.6241134751773, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI21355753, Length=385, Percent_Identity=28.3116883116883, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=28.3236994219653, Blast_Score=125, Evalue=8e-29,
Organism=Drosophila melanogaster, GI19920834, Length=218, Percent_Identity=33.0275229357798, Blast_Score=101, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 47043; Mature: 47043

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFELPPELVDYLAELDGFIDREIVPLEQADDNIRFFDHRREDSRTDWERGGLPNREWEA
CCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCCCCHHHCCCCCHHHHH
LLGEARRRADVAGHFRYPFPAEFGGRDGSNLGMAVIREHLARRGLGLHCDLQNEHAIVGN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEC
NVGLLLMLEYGSDEQKAAWVEGLAGGTKVFAFGITEPEHGSDATYMETRAVKDGPDWVIN
CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHCCCCCCCCEEEC
GEKTWNTGVHVADADLIFARTSGEPGDGRGITAFLVPADAPGFKVEEYLWTFNMPTDHAH
CCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEHEEEEECCCCCCCE
VSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIRQAASSLGAAQFCIDRSVAYAKERRPF
EEEEEEECCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH
GKALASNQAIQFPLVELQTQCEMLRALIHKTAWSMDTYGPFSVSEQVSMCNYVANRLCCE
HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AADRAMQVHGGMGYSRHMPFEHIYRHHRRYRITEGAEEIQMRRVAGYMFGFMSQKAPKGV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNFELPPELVDYLAELDGFIDREIVPLEQADDNIRFFDHRREDSRTDWERGGLPNREWEA
CCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEECCCCCCCCCHHHCCCCCHHHHH
LLGEARRRADVAGHFRYPFPAEFGGRDGSNLGMAVIREHLARRGLGLHCDLQNEHAIVGN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEC
NVGLLLMLEYGSDEQKAAWVEGLAGGTKVFAFGITEPEHGSDATYMETRAVKDGPDWVIN
CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEHCCCCCCCCEEEC
GEKTWNTGVHVADADLIFARTSGEPGDGRGITAFLVPADAPGFKVEEYLWTFNMPTDHAH
CCCCCCCCCEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEHEEEEECCCCCCCE
VSLTDVRVPDAAIFGGEGRGLGVVQHFFNENRIRQAASSLGAAQFCIDRSVAYAKERRPF
EEEEEEECCCCEEECCCCCCHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHH
GKALASNQAIQFPLVELQTQCEMLRALIHKTAWSMDTYGPFSVSEQVSMCNYVANRLCCE
HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AADRAMQVHGGMGYSRHMPFEHIYRHHRRYRITEGAEEIQMRRVAGYMFGFMSQKAPKGV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]