| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630709
Identifier: 169630709
GI number: 169630709
Start: 3678536
End: 3679567
Strand: Reverse
Name: 169630709
Synonym: MAB_3630c
Alternate gene names: NA
Gene position: 3679567-3678536 (Counterclockwise)
Preceding gene: 169630713
Following gene: 169630708
Centisome position: 72.62
GC content: 66.96
Gene sequence:
>1032_bases ATGGACAAACAGCCTGCATTGGATGCCGACGAGGTGTTCACGATCGTGTCCCATTTCGACCGTCTTGACGTCGCGGATGC CGAGGCCGCGCTGCGTGCGGCGGCAGAGCTGGCCGGATGCCCGGTGGGTGTGCGGTGGTCCGATGCGACAGAGCCCACGG TATGGCTGGAGCGGGAGGGTCCGGCCCGGGCCACCGACGAGCTGCTGCTGCACCGGCTGCGTCATCTGCTGAACCGACTG AACCGAGCGGTGCCCGCCCAGGGGGCTACCTCGCTACGTATCGACGACCCTGCCCTGATCGAACTGCTGTTATCGGGAGA AGCGAAGCCCGAAGAGCGGGCGCGCGCGGCGCGTCTTCTGGGGCTCGACGCCACACGTGAGCTGCGCGTGCTGGCGACCT CGTCGCCCGGGAGCGCCACGAGGCTTCTCGCCAAGGCCCTGCCCGGCCAATCGATCCGGACGGCCACCATCGGCCGAGTC GGCGCTGTGTTGTGCCAGTCGGCCCGGGACACCACATCACTGTCGGATCACCTGAACGAGGTGATCGTCGACGAGTTTCC GGCCTCGGCGCACTCGGAGCGGGGCCCATGGCTTGGCATAGGGGCGAGTGTCGCCGTCCTCGAGGCATCCACATCATGGA ACCAGGCCCAGCGGGCACTGCGCTTCGCCTCGTCCACGGGTTTCGGTCGCCGCGCCATTGCCTACGAGCGGCTCAGTCTG CTGGAGGTCCTCGCCGATATTCCGGTGGAGCGCGTGCGCGAGATTGATGATGTGGTGCGTATCAACCAGATCGCGTCGAC GGCGGCCGGTGCCGCCGAGGTGGACACGTTGGAGGCGCTCTGCCAATACGGCACGTTGCGTCGCACCGCGACGGAACTAC ATCTGCACCACAGCACGGTCGCCGCACGCATCCAGCATGTCGAGCGGTCAATGGGCTGGGACCTGGACGACCCTATCGAC CGATTTCTGGCCACCTTCGCGTTGATGCTACGACGCGTATCGCTGTCCGCCACCGAGTTGGCGGGTGGCTAG
Upstream 100 bases:
>100_bases GATGCTATCGCGCGCCACCCGGCAGAACACGCATGGGCCTTAGAGAGTTCTCAGAAATTTTCACGAAGAGATGTCCGCCG ATCGCGGTAGATAGAAGGAG
Downstream 100 bases:
>100_bases ACCGCCGCGTGTCGGATGTCGCCCGGGTATTTCTCGACAGCTGTCGGATGACATCGAGGGTGCCGGCCGACACGATTGAT CCATGGCAGTCATCGACACC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator LysR Family; Regulatory Protein LysR
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MDKQPALDADEVFTIVSHFDRLDVADAEAALRAAAELAGCPVGVRWSDATEPTVWLEREGPARATDELLLHRLRHLLNRL NRAVPAQGATSLRIDDPALIELLLSGEAKPEERARAARLLGLDATRELRVLATSSPGSATRLLAKALPGQSIRTATIGRV GAVLCQSARDTTSLSDHLNEVIVDEFPASAHSERGPWLGIGASVAVLEASTSWNQAQRALRFASSTGFGRRAIAYERLSL LEVLADIPVERVREIDDVVRINQIASTAAGAAEVDTLEALCQYGTLRRTATELHLHHSTVAARIQHVERSMGWDLDDPID RFLATFALMLRRVSLSATELAGG
Sequences:
>Translated_343_residues MDKQPALDADEVFTIVSHFDRLDVADAEAALRAAAELAGCPVGVRWSDATEPTVWLEREGPARATDELLLHRLRHLLNRL NRAVPAQGATSLRIDDPALIELLLSGEAKPEERARAARLLGLDATRELRVLATSSPGSATRLLAKALPGQSIRTATIGRV GAVLCQSARDTTSLSDHLNEVIVDEFPASAHSERGPWLGIGASVAVLEASTSWNQAQRALRFASSTGFGRRAIAYERLSL LEVLADIPVERVREIDDVVRINQIASTAAGAAEVDTLEALCQYGTLRRTATELHLHHSTVAARIQHVERSMGWDLDDPID RFLATFALMLRRVSLSATELAGG >Mature_343_residues MDKQPALDADEVFTIVSHFDRLDVADAEAALRAAAELAGCPVGVRWSDATEPTVWLEREGPARATDELLLHRLRHLLNRL NRAVPAQGATSLRIDDPALIELLLSGEAKPEERARAARLLGLDATRELRVLATSSPGSATRLLAKALPGQSIRTATIGRV GAVLCQSARDTTSLSDHLNEVIVDEFPASAHSERGPWLGIGASVAVLEASTSWNQAQRALRFASSTGFGRRAIAYERLSL LEVLADIPVERVREIDDVVRINQIASTAAGAAEVDTLEALCQYGTLRRTATELHLHHSTVAARIQHVERSMGWDLDDPID RFLATFALMLRRVSLSATELAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37132; Mature: 37132
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQPALDADEVFTIVSHFDRLDVADAEAALRAAAELAGCPVGVRWSDATEPTVWLEREG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC PARATDELLLHRLRHLLNRLNRAVPAQGATSLRIDDPALIELLLSGEAKPEERARAARLL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHH GLDATRELRVLATSSPGSATRLLAKALPGQSIRTATIGRVGAVLCQSARDTTSLSDHLNE CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIVDEFPASAHSERGPWLGIGASVAVLEASTSWNQAQRALRFASSTGFGRRAIAYERLSL HHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LEVLADIPVERVREIDDVVRINQIASTAAGAAEVDTLEALCQYGTLRRTATELHLHHSTV HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARIQHVERSMGWDLDDPIDRFLATFALMLRRVSLSATELAGG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure MDKQPALDADEVFTIVSHFDRLDVADAEAALRAAAELAGCPVGVRWSDATEPTVWLEREG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC PARATDELLLHRLRHLLNRLNRAVPAQGATSLRIDDPALIELLLSGEAKPEERARAARLL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHH GLDATRELRVLATSSPGSATRLLAKALPGQSIRTATIGRVGAVLCQSARDTTSLSDHLNE CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIVDEFPASAHSERGPWLGIGASVAVLEASTSWNQAQRALRFASSTGFGRRAIAYERLSL HHHHHCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH LEVLADIPVERVREIDDVVRINQIASTAAGAAEVDTLEALCQYGTLRRTATELHLHHSTV HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARIQHVERSMGWDLDDPIDRFLATFALMLRRVSLSATELAGG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA