| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is manA [H]
Identifier: 169630681
GI number: 169630681
Start: 3651693
End: 3652910
Strand: Reverse
Name: manA [H]
Synonym: MAB_3601c
Alternate gene names: 169630681
Gene position: 3652910-3651693 (Counterclockwise)
Preceding gene: 169630682
Following gene: 169630680
Centisome position: 72.09
GC content: 66.75
Gene sequence:
>1218_bases GTGAATCTGCTCAGGGGGGCGATAAGGACGTACGCCTGGGGTTCGCGGACGGCCATCGCCGAGTTCACCGGACGCCCCAC GCCCACACCGCATCCGGAGGCCGAGCTGTGGCTGGGGGCGCATCCCGCGGACCCCGCATATCTGGAAACCGGTGGCGGCG CAGAGTCGTTGCTTGAGGTGGTGGCCGCCGATCCGACCGGCCAGCTGGGTGCGGCGTCCGTGGCGGAGTTTGGTGACCAG TTACCCTTCCTGCTCAAGGTGCTAGCCGCCGACGAGCCACTTTCCTTGCAGGCGCACCCAAGCGCCCAGCAGGCCGCGGA CGGGTTCGCGCGCGAAGAGGCGGCGGGTGTGCCGCTCAACTCTCCGGTACGTAACTACCGCGATCGCAACCACAAACCGG AACTTGTGGTGGCCTTAGACCGTTTCGAGGCGCTGGCGGGTTTCCGTGATCCGGGCGATACGGTGGACCTGTTCCGTGCG CTCGACGTCGAAGCGCTGACACCGTATGTGAACCTGCTGGCCGGTCAATCCGATGCCGATGGTCTACGGGCCCTGTTCAC CACCTGGATCACCCTTCCCCAGCCGAGTCTGGATGTGTTGGTGCCCGCGGTGCTCGACGGGGCGGTGCGTTATCTGTCCT CCGATGACGTGCGCTTCGTCGGCGAGGCCCGCACGCTCCTGGAGTTGGGTGAGCGCTATCCCGCAGACGCGGGCGTGCTG GCCTCGCTGCTGTTGAATCGGCTGACGCTGGAACCGGGGGAGGGGATCTACCTGCCTGCCGGGAACCTGCACGCGTATCT GCGCGGCTTGGCGGTGGAGATCATGGCCAACTCCGATAACGTCCTGCGCGGCGGCCTGACGCCCAAGCACGTAGATGTTC CGGAACTGCTTCGGGTGCTGGACTTTTCGCCCGCTTCCGAGGCGCACCTACATGTCGAGACGGTTACCGATGGTGCCCAG ACCCGCTACCGCACTCCTGCCAGGGAGTTCGCGCTTTCGCGTTTCGACTTGGCGGCCGGCGAGCCCACCCAGGTGGGTAT CAAGGGCCCGCGGATACTGCTGTGCACCCAGGGCGATGTGACTCTGGACGGTTCGGGGGCCGGCCTGAAGGTGCGTGCGG GTCAGTCGGTGTGGGTGCCGGCCGACGGGGGCAGTGTCACACTGACCGGGCGGTCCGATGCCCGGGTGTTCATGGCAACA GTCGACGCGGACGCGTAA
Upstream 100 bases:
>100_bases TAGCGGCCAGGCCTTCGGAGCTGGCACAGTTGATGATGCTTTCGACACGGCTCGAAATGGCCTCGGTGTACGCCCGGCTT GGTGGGGGGAGATCCGGGCT
Downstream 100 bases:
>100_bases CGGCCGCAGGGGCGGGAACAGAAGGAGAGTCGATGTCGGCAGGTGGCAGTAAGAGGGCGATTATCGCGGCGCTGGCGGCC AATGCCGGTATCGCCGTGGC
Product: mannose-6-phosphate isomerase ManA
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MNLLRGAIRTYAWGSRTAIAEFTGRPTPTPHPEAELWLGAHPADPAYLETGGGAESLLEVVAADPTGQLGAASVAEFGDQ LPFLLKVLAADEPLSLQAHPSAQQAADGFAREEAAGVPLNSPVRNYRDRNHKPELVVALDRFEALAGFRDPGDTVDLFRA LDVEALTPYVNLLAGQSDADGLRALFTTWITLPQPSLDVLVPAVLDGAVRYLSSDDVRFVGEARTLLELGERYPADAGVL ASLLLNRLTLEPGEGIYLPAGNLHAYLRGLAVEIMANSDNVLRGGLTPKHVDVPELLRVLDFSPASEAHLHVETVTDGAQ TRYRTPAREFALSRFDLAAGEPTQVGIKGPRILLCTQGDVTLDGSGAGLKVRAGQSVWVPADGGSVTLTGRSDARVFMAT VDADA
Sequences:
>Translated_405_residues MNLLRGAIRTYAWGSRTAIAEFTGRPTPTPHPEAELWLGAHPADPAYLETGGGAESLLEVVAADPTGQLGAASVAEFGDQ LPFLLKVLAADEPLSLQAHPSAQQAADGFAREEAAGVPLNSPVRNYRDRNHKPELVVALDRFEALAGFRDPGDTVDLFRA LDVEALTPYVNLLAGQSDADGLRALFTTWITLPQPSLDVLVPAVLDGAVRYLSSDDVRFVGEARTLLELGERYPADAGVL ASLLLNRLTLEPGEGIYLPAGNLHAYLRGLAVEIMANSDNVLRGGLTPKHVDVPELLRVLDFSPASEAHLHVETVTDGAQ TRYRTPAREFALSRFDLAAGEPTQVGIKGPRILLCTQGDVTLDGSGAGLKVRAGQSVWVPADGGSVTLTGRSDARVFMAT VDADA >Mature_405_residues MNLLRGAIRTYAWGSRTAIAEFTGRPTPTPHPEAELWLGAHPADPAYLETGGGAESLLEVVAADPTGQLGAASVAEFGDQ LPFLLKVLAADEPLSLQAHPSAQQAADGFAREEAAGVPLNSPVRNYRDRNHKPELVVALDRFEALAGFRDPGDTVDLFRA LDVEALTPYVNLLAGQSDADGLRALFTTWITLPQPSLDVLVPAVLDGAVRYLSSDDVRFVGEARTLLELGERYPADAGVL ASLLLNRLTLEPGEGIYLPAGNLHAYLRGLAVEIMANSDNVLRGGLTPKHVDVPELLRVLDFSPASEAHLHVETVTDGAQ TRYRTPAREFALSRFDLAAGEPTQVGIKGPRILLCTQGDVTLDGSGAGLKVRAGQSVWVPADGGSVTLTGRSDARVFMAT VDADA
Specific function: Involved in the conversion of glucose to GDP-L-fucose, which can be converted to L-fucose, a capsular polysaccharide [H]
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
Organism=Homo sapiens, GI4505235, Length=427, Percent_Identity=31.1475409836066, Blast_Score=175, Evalue=6e-44, Organism=Escherichia coli, GI1787899, Length=399, Percent_Identity=39.0977443609023, Blast_Score=273, Evalue=2e-74, Organism=Caenorhabditis elegans, GI71997620, Length=315, Percent_Identity=32.3809523809524, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17557650, Length=365, Percent_Identity=30.4109589041096, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320839, Length=426, Percent_Identity=29.3427230046948, Blast_Score=165, Evalue=1e-41, Organism=Drosophila melanogaster, GI21356061, Length=415, Percent_Identity=27.710843373494, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR016305 - InterPro: IPR018050 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 43005; Mature: 43005
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00965 PMI_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLRGAIRTYAWGSRTAIAEFTGRPTPTPHPEAELWLGAHPADPAYLETGGGAESLLEV CCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHH VAADPTGQLGAASVAEFGDQLPFLLKVLAADEPLSLQAHPSAQQAADGFAREEAAGVPLN HHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHCCCCCC SPVRNYRDRNHKPELVVALDRFEALAGFRDPGDTVDLFRALDVEALTPYVNLLAGQSDAD CHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCH GLRALFTTWITLPQPSLDVLVPAVLDGAVRYLSSDDVRFVGEARTLLELGERYPADAGVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHH ASLLLNRLTLEPGEGIYLPAGNLHAYLRGLAVEIMANSDNVLRGGLTPKHVDVPELLRVL HHHHHHHHCCCCCCEEEECCCCHHHHHHCEEEEEEECCCCEEECCCCCCCCCHHHHHHHH DFSPASEAHLHVETVTDGAQTRYRTPAREFALSRFDLAAGEPTQVGIKGPRILLCTQGDV CCCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCE TLDGSGAGLKVRAGQSVWVPADGGSVTLTGRSDARVFMATVDADA EECCCCCCEEEECCCEEEEECCCCEEEEECCCCCEEEEEEECCCC >Mature Secondary Structure MNLLRGAIRTYAWGSRTAIAEFTGRPTPTPHPEAELWLGAHPADPAYLETGGGAESLLEV CCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHH VAADPTGQLGAASVAEFGDQLPFLLKVLAADEPLSLQAHPSAQQAADGFAREEAAGVPLN HHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHCCCCCC SPVRNYRDRNHKPELVVALDRFEALAGFRDPGDTVDLFRALDVEALTPYVNLLAGQSDAD CHHHHHHCCCCCCCEEEEEHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCH GLRALFTTWITLPQPSLDVLVPAVLDGAVRYLSSDDVRFVGEARTLLELGERYPADAGVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCHHHH ASLLLNRLTLEPGEGIYLPAGNLHAYLRGLAVEIMANSDNVLRGGLTPKHVDVPELLRVL HHHHHHHHCCCCCCEEEECCCCHHHHHHCEEEEEEECCCCEEECCCCCCCCCHHHHHHHH DFSPASEAHLHVETVTDGAQTRYRTPAREFALSRFDLAAGEPTQVGIKGPRILLCTQGDV CCCCCCCCEEEEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEECCCCE TLDGSGAGLKVRAGQSVWVPADGGSVTLTGRSDARVFMATVDADA EECCCCCCEEEECCCEEEEECCCCEEEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6397402; 9097039; 9278503 [H]