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The map label for this gene is lpqB [H]

Identifier: 169630669

GI number: 169630669

Start: 3637622

End: 3639376

Strand: Reverse

Name: lpqB [H]

Synonym: MAB_3589c

Alternate gene names: 169630669

Gene position: 3639376-3637622 (Counterclockwise)

Preceding gene: 169630670

Following gene: 169630667

Centisome position: 71.82

GC content: 66.5

Gene sequence:

>1755_bases
GTGACATGCCGCAAGGTGGCCGCGGTTCTGGCGGCGGTAGCGCTCATCGTCCCCAGTTGCGCCGGCGTGCCCTCATCGTC
CTCGCCGCAGGCGATCGGCACAGTGCAGCGCCCGGCACCGCCGGGGATGCCCGCACCTACACCGGGTATGGAGCCCGAAA
CGGTGCTGCGCGAATTCTTGAAGGCGACCGCTGACCCGTCCAACAGGCACCGGGCGGCGCGCCAGTTCCTTACCGAATCC
GGTTCGCGGACTTGGGATGACGCGGGCGCTGCGGTGTTGATCGAGTCGCCGGTATTCGCCGACCAGCGTGGTGTCGATCG
TTGGACGATCAACGTGCGCGCCAACAAGTTGGGCACCCTGTCCGACATCGGGGTCTTCGAGACCGCTCAGGGTGATGTTC
AAGATCCGCAGTTCACCCTGGTGAAGGCCAACGGTGAATGGCGGATCGATTCGCTGCCCAACGGGGTACTGCTCGACTGG
GGGCAGTTTCAGTCCACCTATCGCCGGTACACCGTTTATTTCGCCGACCCGGCCGGCCGCACCGTGGTGCCCGATCCGCG
GTATGTGGCCGTTAACGATCCCGATCTGCTGGCCACCGAACTCGTGTACAAACTCTTGTCCGGCCCACGTCCCGAGCTTG
CGGGGGCAGTGCGCAACCACCTGAACGGCCTGCGGTTGCGAGGCCCGGTGACCCGCGTCGACGGCAGCAGGGTCGACGTG
GGCCGCGGATACGGCGGCGTGCGTGTGGAGCTGGAAGGTGACCTGACGCCCGATCAGCGCACCCGGCAGTTCCTCGCGGC
GCAGGTGATTTGGACGCTCTCGCGGGCGGGTATCGCCGGGCCGTATGTCCTGCAGGTCAATGGTGCTCCGCTGGACGAGC
AGTTCGCGCAGGGCTGGAGCACTCAGAACGTCGCGTCGACGGATCCCGGCGCGTCGGAGGGCGCGGGGGTGGGCCTCTAC
GGATTGTTGAACGGGTCCATGGTGACGGTGGATCGCGATGCCGCGGTGCCCGTGCGTGGATCTTTTGGCCAGGTGGGCAA
CCAGGTTTCGGCGGCACTCTCGCGTAGTGGGCGACAGGTGGCATCGGTCGTGCGGGTGCAGGCCGGAGACGATCCACAGA
TGTCGCTTTGGGTCGGTGCCAACGGCGCGAACGGCAGTGAGGCGGTTGGCGGCAAGACGCTGACCCGTCCTAGCTGGGCG
CTCGACGATGCGGTGTGGACGGTTATCGACGGCGGCCGAGTGGTTCGGATAATCCAGGAGGCCACCACATCCATGGTGGC
GGTGTTGCCCGTCGAACCGTCGGCGGTGGCGGAGAAGTACAAGGGTCCGATCACCGAATTGGCGTTGTCCCGGGACGGCA
CTCGCGCCGCGATGATCATCGAGGGCCAGGTGATCCTGGCGACGGTCGTGCAGACCGAGAGCGGCGACTATGCCTTGACG
CATCCGCGTCGGTTGGGCTACGGCCTCGGCAATTCGGCGGTGTCACTGGCGTGGCGCACCGGTGACGATATCGCGGTGGC
CCGCAACGACGGGTCACATCCGGTGGCGAATGTGAATCTCGACGGCGTGAACTCAGATCTGAACGACCAGAATCTCCTGA
CGCCGGTATCGACCGTCGCCGCCTCGCCGGCGGCGATCTACATCGCCGACGCGCGCGGCGTGCTGCAGCTGACGGGATTG
GGGACACCGGAGGAGCGATGGGTGGAAGTGCGTCCGCTCATGGTGCCCCAGGCGATTCCGGTACTGACGGGTTAG

Upstream 100 bases:

>100_bases
GTGCTCACCCCGGCGAGCAAGAGACGACGCCCATGCGCGCCTCGGGTGCCAAAATCGAGCGCCCGCGGGAGTCGGCCGGC
GGCCGGGCGGAGGATGCGTC

Downstream 100 bases:

>100_bases
TTGTCGGGGATCATCTCCGTGGCGAGCAGTGCCTCGGGAATTCCGAAGGCGTCCACCAGGGTTCCGAGGTGTGGGCGCAG
TTCTTCGCACAGCTGGTTGA

Product: lipoprotein LpqB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MTCRKVAAVLAAVALIVPSCAGVPSSSSPQAIGTVQRPAPPGMPAPTPGMEPETVLREFLKATADPSNRHRAARQFLTES
GSRTWDDAGAAVLIESPVFADQRGVDRWTINVRANKLGTLSDIGVFETAQGDVQDPQFTLVKANGEWRIDSLPNGVLLDW
GQFQSTYRRYTVYFADPAGRTVVPDPRYVAVNDPDLLATELVYKLLSGPRPELAGAVRNHLNGLRLRGPVTRVDGSRVDV
GRGYGGVRVELEGDLTPDQRTRQFLAAQVIWTLSRAGIAGPYVLQVNGAPLDEQFAQGWSTQNVASTDPGASEGAGVGLY
GLLNGSMVTVDRDAAVPVRGSFGQVGNQVSAALSRSGRQVASVVRVQAGDDPQMSLWVGANGANGSEAVGGKTLTRPSWA
LDDAVWTVIDGGRVVRIIQEATTSMVAVLPVEPSAVAEKYKGPITELALSRDGTRAAMIIEGQVILATVVQTESGDYALT
HPRRLGYGLGNSAVSLAWRTGDDIAVARNDGSHPVANVNLDGVNSDLNDQNLLTPVSTVAASPAAIYIADARGVLQLTGL
GTPEERWVEVRPLMVPQAIPVLTG

Sequences:

>Translated_584_residues
MTCRKVAAVLAAVALIVPSCAGVPSSSSPQAIGTVQRPAPPGMPAPTPGMEPETVLREFLKATADPSNRHRAARQFLTES
GSRTWDDAGAAVLIESPVFADQRGVDRWTINVRANKLGTLSDIGVFETAQGDVQDPQFTLVKANGEWRIDSLPNGVLLDW
GQFQSTYRRYTVYFADPAGRTVVPDPRYVAVNDPDLLATELVYKLLSGPRPELAGAVRNHLNGLRLRGPVTRVDGSRVDV
GRGYGGVRVELEGDLTPDQRTRQFLAAQVIWTLSRAGIAGPYVLQVNGAPLDEQFAQGWSTQNVASTDPGASEGAGVGLY
GLLNGSMVTVDRDAAVPVRGSFGQVGNQVSAALSRSGRQVASVVRVQAGDDPQMSLWVGANGANGSEAVGGKTLTRPSWA
LDDAVWTVIDGGRVVRIIQEATTSMVAVLPVEPSAVAEKYKGPITELALSRDGTRAAMIIEGQVILATVVQTESGDYALT
HPRRLGYGLGNSAVSLAWRTGDDIAVARNDGSHPVANVNLDGVNSDLNDQNLLTPVSTVAASPAAIYIADARGVLQLTGL
GTPEERWVEVRPLMVPQAIPVLTG
>Mature_583_residues
TCRKVAAVLAAVALIVPSCAGVPSSSSPQAIGTVQRPAPPGMPAPTPGMEPETVLREFLKATADPSNRHRAARQFLTESG
SRTWDDAGAAVLIESPVFADQRGVDRWTINVRANKLGTLSDIGVFETAQGDVQDPQFTLVKANGEWRIDSLPNGVLLDWG
QFQSTYRRYTVYFADPAGRTVVPDPRYVAVNDPDLLATELVYKLLSGPRPELAGAVRNHLNGLRLRGPVTRVDGSRVDVG
RGYGGVRVELEGDLTPDQRTRQFLAAQVIWTLSRAGIAGPYVLQVNGAPLDEQFAQGWSTQNVASTDPGASEGAGVGLYG
LLNGSMVTVDRDAAVPVRGSFGQVGNQVSAALSRSGRQVASVVRVQAGDDPQMSLWVGANGANGSEAVGGKTLTRPSWAL
DDAVWTVIDGGRVVRIIQEATTSMVAVLPVEPSAVAEKYKGPITELALSRDGTRAAMIIEGQVILATVVQTESGDYALTH
PRRLGYGLGNSAVSLAWRTGDDIAVARNDGSHPVANVNLDGVNSDLNDQNLLTPVSTVAASPAAIYIADARGVLQLTGLG
TPEERWVEVRPLMVPQAIPVLTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpqB lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019606
- InterPro:   IPR018910 [H]

Pfam domain/function: PF10646 Germane; PF10647 Gmad1 [H]

EC number: NA

Molecular weight: Translated: 61710; Mature: 61579

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCRKVAAVLAAVALIVPSCAGVPSSSSPQAIGTVQRPAPPGMPAPTPGMEPETVLREFL
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
KATADPSNRHRAARQFLTESGSRTWDDAGAAVLIESPVFADQRGVDRWTINVRANKLGTL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC
SDIGVFETAQGDVQDPQFTLVKANGEWRIDSLPNGVLLDWGQFQSTYRRYTVYFADPAGR
CCCCCEECCCCCCCCCCEEEEEECCCEEECCCCCCEEEECHHHHCCEEEEEEEEECCCCC
TVVPDPRYVAVNDPDLLATELVYKLLSGPRPELAGAVRNHLNGLRLRGPVTRVDGSRVDV
CCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCEEECCCCEEEE
GRGYGGVRVELEGDLTPDQRTRQFLAAQVIWTLSRAGIAGPYVLQVNGAPLDEQFAQGWS
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCC
TQNVASTDPGASEGAGVGLYGLLNGSMVTVDRDAAVPVRGSFGQVGNQVSAALSRSGRQV
CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHE
ASVVRVQAGDDPQMSLWVGANGANGSEAVGGKTLTRPSWALDDAVWTVIDGGRVVRIIQE
EHEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHH
ATTSMVAVLPVEPSAVAEKYKGPITELALSRDGTRAAMIIEGQVILATVVQTESGDYALT
HCCCEEEEEECCHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCEEEEEEEEECCCCEEEE
HPRRLGYGLGNSAVSLAWRTGDDIAVARNDGSHPVANVNLDGVNSDLNDQNLLTPVSTVA
CCHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHC
ASPAAIYIADARGVLQLTGLGTPEERWVEVRPLMVPQAIPVLTG
CCCEEEEEECCCCEEEEECCCCCHHHEEEECCEECCCCCCCCCC
>Mature Secondary Structure 
TCRKVAAVLAAVALIVPSCAGVPSSSSPQAIGTVQRPAPPGMPAPTPGMEPETVLREFL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
KATADPSNRHRAARQFLTESGSRTWDDAGAAVLIESPVFADQRGVDRWTINVRANKLGTL
HHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCC
SDIGVFETAQGDVQDPQFTLVKANGEWRIDSLPNGVLLDWGQFQSTYRRYTVYFADPAGR
CCCCCEECCCCCCCCCCEEEEEECCCEEECCCCCCEEEECHHHHCCEEEEEEEEECCCCC
TVVPDPRYVAVNDPDLLATELVYKLLSGPRPELAGAVRNHLNGLRLRGPVTRVDGSRVDV
CCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCEEECCCCEEEE
GRGYGGVRVELEGDLTPDQRTRQFLAAQVIWTLSRAGIAGPYVLQVNGAPLDEQFAQGWS
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCC
TQNVASTDPGASEGAGVGLYGLLNGSMVTVDRDAAVPVRGSFGQVGNQVSAALSRSGRQV
CCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHE
ASVVRVQAGDDPQMSLWVGANGANGSEAVGGKTLTRPSWALDDAVWTVIDGGRVVRIIQE
EHEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHH
ATTSMVAVLPVEPSAVAEKYKGPITELALSRDGTRAAMIIEGQVILATVVQTESGDYALT
HCCCEEEEEECCHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCEEEEEEEEECCCCEEEE
HPRRLGYGLGNSAVSLAWRTGDDIAVARNDGSHPVANVNLDGVNSDLNDQNLLTPVSTVA
CCHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHC
ASPAAIYIADARGVLQLTGLGTPEERWVEVRPLMVPQAIPVLTG
CCCEEEEEECCCCEEEEECCCCCHHHEEEECCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA