| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169630639
Identifier: 169630639
GI number: 169630639
Start: 3603323
End: 3604441
Strand: Direct
Name: 169630639
Synonym: MAB_3558
Alternate gene names: NA
Gene position: 3603323-3604441 (Clockwise)
Preceding gene: 169630638
Following gene: 169630645
Centisome position: 71.11
GC content: 56.93
Gene sequence:
>1119_bases TTGACCGCCTCTGACGATTGGCATTTCATCGGATATCAGACGGCGGCGTTGATGTTCCTGGCCGGCGGAATCTGGGTGCT CGCCCTCGTCTTGCGCCAGCGACGCAAACCCGGAACCTCTATCATCCTGAGTAGTTCGCTGATACTCGGATTTCTCTTCT ATCAGGCCACTGCCCTTATCTTCATCTCGCGGGCTGCCGAGTTGGTGGCGATCGACCATGTATTCGCACTCATAACGCAC CTACTTGGCGTCTTGTGGAGCTTTTCCACGATTCTTCTCGCACTCAGTTGGCTGAATCCCGAGTATGTCAGAAAAAATCT GTGGTGGCTGCTCGCAAGCTCGATGACAGCCTGCGCCATCTTGATCTCGACTTTTGTTCTGTTGTACCCGGGCCCACCGG GATACAACTATATCGTGAATATCGCGGACCAGCCTTTGGGAAAAATCTATTCGTCGACCTACGCTATATCCATCCTGGCG GCCAAAATTTTGGTCATAGTGATCACCGTTCCACAGATTCGGCGAGTCCAAAATCCGATGGTGCGTATCGGATTGGTATT AGTCGCAGGCGGCTCGTTCCTCATCGCATTATTCGCATCGATGCGCCTCACATTCGGCGTATTGCAGTCCTATCTCTCGC CGGCCAATCTCGAATTGTTACCGCTGACGGCACATGTAACGGGCGCGATCATGTACGTGATGGGTATCGCGTTGGTGCAA CTGATGGTCACTGCCTGGATGCTGCTCACCGGCATAGGTAACTATTGGCGGCTTCGCCCGCTCTGCCGCGCCGGTGTCGC CGAATTCCCCGCCCTAGGCATGGTCCCGACCCTGCAGCTTCGCGACTATTGGTCAGTCGAACGGACGAACACGCAGCTCC TCGCCGTGGTTGTGCTACTCCTCGACGTCAGCGTGTTGCTGGCCCGTGCCAGCAATCAACCATCGCCCCACCCACAGGCT GAGGCCACCCTGCCCACAGGCGACCTACGTGCCGCCTATCGGGACGATCTGAAGCGAATGCTGGGAGTGGCCAGTCGCTA TCGGACCTTGCGCCGCGCCCAATGTCCTTCGGACGCACTCCGCAGATCACTAGTCGATGGGCGGCAAGCCTTCCAATGA
Upstream 100 bases:
>100_bases CTGGCACAACGCATGAGGATGCAATCGCCTCGCCCATCGGCAGGGCGGTCGCACCCCGCCGCCCGAAGAATCTCCGACAC CCTAACCGGGGGGCGCCTCT
Downstream 100 bases:
>100_bases CCGAACGCTGTTGATTATCTGGGCAATATGGCGCATTGACGACGCGCTGAGACCGGCCGCACGAAACCCCAACTCCGTAG CACCTGCGGCCTGTAGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MTASDDWHFIGYQTAALMFLAGGIWVLALVLRQRRKPGTSIILSSSLILGFLFYQATALIFISRAAELVAIDHVFALITH LLGVLWSFSTILLALSWLNPEYVRKNLWWLLASSMTACAILISTFVLLYPGPPGYNYIVNIADQPLGKIYSSTYAISILA AKILVIVITVPQIRRVQNPMVRIGLVLVAGGSFLIALFASMRLTFGVLQSYLSPANLELLPLTAHVTGAIMYVMGIALVQ LMVTAWMLLTGIGNYWRLRPLCRAGVAEFPALGMVPTLQLRDYWSVERTNTQLLAVVVLLLDVSVLLARASNQPSPHPQA EATLPTGDLRAAYRDDLKRMLGVASRYRTLRRAQCPSDALRRSLVDGRQAFQ
Sequences:
>Translated_372_residues MTASDDWHFIGYQTAALMFLAGGIWVLALVLRQRRKPGTSIILSSSLILGFLFYQATALIFISRAAELVAIDHVFALITH LLGVLWSFSTILLALSWLNPEYVRKNLWWLLASSMTACAILISTFVLLYPGPPGYNYIVNIADQPLGKIYSSTYAISILA AKILVIVITVPQIRRVQNPMVRIGLVLVAGGSFLIALFASMRLTFGVLQSYLSPANLELLPLTAHVTGAIMYVMGIALVQ LMVTAWMLLTGIGNYWRLRPLCRAGVAEFPALGMVPTLQLRDYWSVERTNTQLLAVVVLLLDVSVLLARASNQPSPHPQA EATLPTGDLRAAYRDDLKRMLGVASRYRTLRRAQCPSDALRRSLVDGRQAFQ >Mature_371_residues TASDDWHFIGYQTAALMFLAGGIWVLALVLRQRRKPGTSIILSSSLILGFLFYQATALIFISRAAELVAIDHVFALITHL LGVLWSFSTILLALSWLNPEYVRKNLWWLLASSMTACAILISTFVLLYPGPPGYNYIVNIADQPLGKIYSSTYAISILAA KILVIVITVPQIRRVQNPMVRIGLVLVAGGSFLIALFASMRLTFGVLQSYLSPANLELLPLTAHVTGAIMYVMGIALVQL MVTAWMLLTGIGNYWRLRPLCRAGVAEFPALGMVPTLQLRDYWSVERTNTQLLAVVVLLLDVSVLLARASNQPSPHPQAE ATLPTGDLRAAYRDDLKRMLGVASRYRTLRRAQCPSDALRRSLVDGRQAFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41102; Mature: 40971
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASDDWHFIGYQTAALMFLAGGIWVLALVLRQRRKPGTSIILSSSLILGFLFYQATALI CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH FISRAAELVAIDHVFALITHLLGVLWSFSTILLALSWLNPEYVRKNLWWLLASSMTACAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LISTFVLLYPGPPGYNYIVNIADQPLGKIYSSTYAISILAAKILVIVITVPQIRRVQNPM HHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH VRIGLVLVAGGSFLIALFASMRLTFGVLQSYLSPANLELLPLTAHVTGAIMYVMGIALVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LMVTAWMLLTGIGNYWRLRPLCRAGVAEFPALGMVPTLQLRDYWSVERTNTQLLAVVVLL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCEEHHCCCCHHCCCHHHHHHHHHH LDVSVLLARASNQPSPHPQAEATLPTGDLRAAYRDDLKRMLGVASRYRTLRRAQCPSDAL HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRSLVDGRQAFQ HHHHHHHHHHCC >Mature Secondary Structure TASDDWHFIGYQTAALMFLAGGIWVLALVLRQRRKPGTSIILSSSLILGFLFYQATALI CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH FISRAAELVAIDHVFALITHLLGVLWSFSTILLALSWLNPEYVRKNLWWLLASSMTACAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LISTFVLLYPGPPGYNYIVNIADQPLGKIYSSTYAISILAAKILVIVITVPQIRRVQNPM HHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH VRIGLVLVAGGSFLIALFASMRLTFGVLQSYLSPANLELLPLTAHVTGAIMYVMGIALVQ HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LMVTAWMLLTGIGNYWRLRPLCRAGVAEFPALGMVPTLQLRDYWSVERTNTQLLAVVVLL HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCEEHHCCCCHHCCCHHHHHHHHHH LDVSVLLARASNQPSPHPQAEATLPTGDLRAAYRDDLKRMLGVASRYRTLRRAQCPSDAL HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRSLVDGRQAFQ HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA