| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630578
Identifier: 169630578
GI number: 169630578
Start: 3537093
End: 3537806
Strand: Direct
Name: 169630578
Synonym: MAB_3497
Alternate gene names: NA
Gene position: 3537093-3537806 (Clockwise)
Preceding gene: 169630577
Following gene: 169630581
Centisome position: 69.8
GC content: 63.03
Gene sequence:
>714_bases GTGGAGGCCGAGGACATCACCTACCTCGGTGCGAGCAGTGGAGGGGCCCGGCCGATGTCTCTTGTTGACCCATCCCGGTT CGCGCCCTGGCACTGCCCACCTCCCCTGTTCCGGAACGTCGAGCTGGGTCGGGTCGAGGTTTCCTCTGGCCGGCTGGCGA TTCGGGACGTCTACGACCGCGATCATCCACAAGTAGTTCTGAACGTGGCACCCGGAAACTACCGCGTGTGGTCCACCGAG CTCGATCTGCGGACAAACCCCAGGGGCCCGTTGTTTCGGCCGGCGTATCTCTCGATCCAACTCTCTGACGCGCCGCCTAG ACGAATCGACTTCCCCGAAGACCTGTATGGAACACCTGCTCCCCCATACGGAATCGGTGTCTCGACCGACCTAGGCATGA TTCTGCTCCACGACGCCGAAGCGCTCTCCCCTCATGAGTTCGAGGCTTTGGACCGCAGCTGGGAGCGTGCGTGGGAAAGC GATCGGGACTATTCGGATGTCTATACCGCGAGCGGTGCCACGGTCATCACCTGTAAAACGGTGATCGACAAGGCCCGTCA CCCGATTGTGGCCAGTTACGATGCCAAGAACCAGCCCGTCGGAATCCACGTCGACTTCGGTGTGCTCGGTGCTTCCCAAG CCGCACTGCGGAATTCGCGCGGTCGTCTCCGGCGTTGGGGCGCCGCCGCCGGACGGTTGTTGCGCCGCAAGTAG
Upstream 100 bases:
>100_bases CTAATCGCCTCACGGGCACGGGCCAGAGACTGAATTGTCTCTGGCCCGTGATGATTGGGGGCTTCGGCCTATGTCACGAT TACCGACGAATCAAAGGATT
Downstream 100 bases:
>100_bases AGCGGGCTCAGCCTCGGCACGGATATCGGCGATCACAAGCGGACCGGACGCGGGCGCCGACGCACGATGCCGCATCTCCA GTCCGCATCAGGGAGCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MEAEDITYLGASSGGARPMSLVDPSRFAPWHCPPPLFRNVELGRVEVSSGRLAIRDVYDRDHPQVVLNVAPGNYRVWSTE LDLRTNPRGPLFRPAYLSIQLSDAPPRRIDFPEDLYGTPAPPYGIGVSTDLGMILLHDAEALSPHEFEALDRSWERAWES DRDYSDVYTASGATVITCKTVIDKARHPIVASYDAKNQPVGIHVDFGVLGASQAALRNSRGRLRRWGAAAGRLLRRK
Sequences:
>Translated_237_residues MEAEDITYLGASSGGARPMSLVDPSRFAPWHCPPPLFRNVELGRVEVSSGRLAIRDVYDRDHPQVVLNVAPGNYRVWSTE LDLRTNPRGPLFRPAYLSIQLSDAPPRRIDFPEDLYGTPAPPYGIGVSTDLGMILLHDAEALSPHEFEALDRSWERAWES DRDYSDVYTASGATVITCKTVIDKARHPIVASYDAKNQPVGIHVDFGVLGASQAALRNSRGRLRRWGAAAGRLLRRK >Mature_237_residues MEAEDITYLGASSGGARPMSLVDPSRFAPWHCPPPLFRNVELGRVEVSSGRLAIRDVYDRDHPQVVLNVAPGNYRVWSTE LDLRTNPRGPLFRPAYLSIQLSDAPPRRIDFPEDLYGTPAPPYGIGVSTDLGMILLHDAEALSPHEFEALDRSWERAWES DRDYSDVYTASGATVITCKTVIDKARHPIVASYDAKNQPVGIHVDFGVLGASQAALRNSRGRLRRWGAAAGRLLRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26289; Mature: 26289
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAEDITYLGASSGGARPMSLVDPSRFAPWHCPPPLFRNVELGRVEVSSGRLAIRDVYDR CCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCEEEECCCCEEEEECCCC DHPQVVLNVAPGNYRVWSTELDLRTNPRGPLFRPAYLSIQLSDAPPRRIDFPEDLYGTPA CCCEEEEEECCCCEEEEEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCHHHCCCCC PPYGIGVSTDLGMILLHDAEALSPHEFEALDRSWERAWESDRDYSDVYTASGATVITCKT CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEHH VIDKARHPIVASYDAKNQPVGIHVDFGVLGASQAALRNSRGRLRRWGAAAGRLLRRK HHHHHCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEAEDITYLGASSGGARPMSLVDPSRFAPWHCPPPLFRNVELGRVEVSSGRLAIRDVYDR CCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCEEEECCCCEEEEECCCC DHPQVVLNVAPGNYRVWSTELDLRTNPRGPLFRPAYLSIQLSDAPPRRIDFPEDLYGTPA CCCEEEEEECCCCEEEEEEEEEEEECCCCCEECCEEEEEEECCCCCCCCCCCHHHCCCCC PPYGIGVSTDLGMILLHDAEALSPHEFEALDRSWERAWESDRDYSDVYTASGATVITCKT CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEHH VIDKARHPIVASYDAKNQPVGIHVDFGVLGASQAALRNSRGRLRRWGAAAGRLLRRK HHHHHCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA