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The map label for this gene is yagI [C]

Identifier: 169630560

GI number: 169630560

Start: 3519349

End: 3520239

Strand: Reverse

Name: yagI [C]

Synonym: MAB_3479c

Alternate gene names: 169630560

Gene position: 3520239-3519349 (Counterclockwise)

Preceding gene: 169630565

Following gene: 169630559

Centisome position: 69.47

GC content: 65.32

Gene sequence:

>891_bases
ATGACCAAGCCCGCGCCTGCCGTCGTGCGTGCGGCGCAGATCCTCGATCATCTGGCGGGACGCCCTACTCTGCCGCTGTC
GATGACCGAAATCGCCGAGGCCGTCGGTGTCAATCCCGCGTCCACTCTGGCGATACTTCAGGCGCTCACCGAAGCGGGGT
ATATCGTCCGGCATCCCCGGCACAAGACATATTCGATCGGTCCGGCCATGCTGATCACCGGCCATGCCGCGCGAATGCGA
TTTGAGGTCGCCGATGTGGTGAACGCCGAAGTGCAGCGGCTGGCATCTCAATTCGGGACGGCCTGCACGGCATCGATGAT
CGCGGGCGAGGACGTCGCCGTCATCGCCTCACACGGCCGCTCGCCGACCGGCGCCAGCTATCAGGTGGGGCAGCGAATCA
GGCTCAGCGCGCCTGCCGGCCTGGTGTTCATGGCCTGGGCACCGGACGACGGTGTGCGGCGCTGGTTGCTGCGAGCGACA
CCGGTGATCACCGACGAGCTGTGGGACGGGATGCAGGCCATGCTGGCCGACATTCGGCGGCAGGGCTACTTCGCGTCCGT
GCAGAGCGATCGTGTGGACAAGTTCTATATGCAGCTGGGCGATACGGCCGCTCACGGGACCGTTCACGAGCGGCTCGACA
CCATCCAGTCGATGCTGGCCACTTTGTTGGCCCGTATGGGCGAACCCATCGACTTCAGCGAGCCGCGGCGCATCGGCTTC
CTGGGGGCACCCGTCTTCGATGGCAATGGCGAGGTTTCGGTGATGCTCAGCGTGCTGGGGACGCCGAATCGGCTCACCGA
AGCCGAGGTCGCGCATGCGGGCAATCAGCTGCGATTCTGTGCCGATCACATCACCTCGATCACCCATGGCAGGCAGGGCT
CCGGCACATAG

Upstream 100 bases:

>100_bases
CCCAGGGTAGCTAGGTAGTCGGCTATTGTATTTCTTGTTGAAATTCGATATATCAAATTCGACGGAATATTAGCAGCCAG
GCGGTCGGATCGGGGGGTAA

Downstream 100 bases:

>100_bases
CCGTCAGGTGGACATGGGACCGGGCGTATGACCGGTAACCTGAACTGTTGTGGATCTGGACTGCCAAGCCGACATCGCTG
ACCTCGACACGACCCTCACC

Product: IclR family regulatory protein

Products: NA

Alternate protein names: IclR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Proteins IclR; Transcription Regulator Protein; IclR Family Regulatory Protein; Transcriptional Regulator PadR Family Protein; IclR Helix-Turn-Helix Domain Family Protein; Iclr Family Transcriptional Regulator; Regulatory Protein IclR

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTKPAPAVVRAAQILDHLAGRPTLPLSMTEIAEAVGVNPASTLAILQALTEAGYIVRHPRHKTYSIGPAMLITGHAARMR
FEVADVVNAEVQRLASQFGTACTASMIAGEDVAVIASHGRSPTGASYQVGQRIRLSAPAGLVFMAWAPDDGVRRWLLRAT
PVITDELWDGMQAMLADIRRQGYFASVQSDRVDKFYMQLGDTAAHGTVHERLDTIQSMLATLLARMGEPIDFSEPRRIGF
LGAPVFDGNGEVSVMLSVLGTPNRLTEAEVAHAGNQLRFCADHITSITHGRQGSGT

Sequences:

>Translated_296_residues
MTKPAPAVVRAAQILDHLAGRPTLPLSMTEIAEAVGVNPASTLAILQALTEAGYIVRHPRHKTYSIGPAMLITGHAARMR
FEVADVVNAEVQRLASQFGTACTASMIAGEDVAVIASHGRSPTGASYQVGQRIRLSAPAGLVFMAWAPDDGVRRWLLRAT
PVITDELWDGMQAMLADIRRQGYFASVQSDRVDKFYMQLGDTAAHGTVHERLDTIQSMLATLLARMGEPIDFSEPRRIGF
LGAPVFDGNGEVSVMLSVLGTPNRLTEAEVAHAGNQLRFCADHITSITHGRQGSGT
>Mature_295_residues
TKPAPAVVRAAQILDHLAGRPTLPLSMTEIAEAVGVNPASTLAILQALTEAGYIVRHPRHKTYSIGPAMLITGHAARMRF
EVADVVNAEVQRLASQFGTACTASMIAGEDVAVIASHGRSPTGASYQVGQRIRLSAPAGLVFMAWAPDDGVRRWLLRATP
VITDELWDGMQAMLADIRRQGYFASVQSDRVDKFYMQLGDTAAHGTVHERLDTIQSMLATLLARMGEPIDFSEPRRIGFL
GAPVFDGNGEVSVMLSVLGTPNRLTEAEVAHAGNQLRFCADHITSITHGRQGSGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31794; Mature: 31663

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPAPAVVRAAQILDHLAGRPTLPLSMTEIAEAVGVNPASTLAILQALTEAGYIVRHPR
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
HKTYSIGPAMLITGHAARMRFEVADVVNAEVQRLASQFGTACTASMIAGEDVAVIASHGR
CCCEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCC
SPTGASYQVGQRIRLSAPAGLVFMAWAPDDGVRRWLLRATPVITDELWDGMQAMLADIRR
CCCCCCHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QGYFASVQSDRVDKFYMQLGDTAAHGTVHERLDTIQSMLATLLARMGEPIDFSEPRRIGF
CCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
LGAPVFDGNGEVSVMLSVLGTPNRLTEAEVAHAGNQLRFCADHITSITHGRQGSGT
EECCEECCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKPAPAVVRAAQILDHLAGRPTLPLSMTEIAEAVGVNPASTLAILQALTEAGYIVRHPR
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEECCC
HKTYSIGPAMLITGHAARMRFEVADVVNAEVQRLASQFGTACTASMIAGEDVAVIASHGR
CCCEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCC
SPTGASYQVGQRIRLSAPAGLVFMAWAPDDGVRRWLLRATPVITDELWDGMQAMLADIRR
CCCCCCHHCCCEEEEECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
QGYFASVQSDRVDKFYMQLGDTAAHGTVHERLDTIQSMLATLLARMGEPIDFSEPRRIGF
CCCEEEHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
LGAPVFDGNGEVSVMLSVLGTPNRLTEAEVAHAGNQLRFCADHITSITHGRQGSGT
EECCEECCCCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA