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The map label for this gene is hspR [H]

Identifier: 169630549

GI number: 169630549

Start: 3509449

End: 3509820

Strand: Direct

Name: hspR [H]

Synonym: MAB_3468

Alternate gene names: 169630549

Gene position: 3509449-3509820 (Clockwise)

Preceding gene: 169630546

Following gene: 169630550

Centisome position: 69.26

GC content: 66.13

Gene sequence:

>372_bases
GTGGTGCCAGAAGACGTCTTGTACCCCAGCGGCAGCCCCGTTCCCCGGCTGGAGGGACCTCGGCCGCCGGAGTTGCCTGC
GCCGGAAAAGGGCGTGTACGGCATTTCCGTCGCCGCCGAGCTTTCCGGAGCTGCCACCCAGTCTCTGCGGCTATGGGAGC
GTCATGGGCTGCTGGCGCCCTCACGGACTGAGGGCGGTACACGCCGCTACAGCCCGGAAGATCTCATCCGTATCCGCCGC
ATAACTACCCTCGTGGCGGCAGGCGTCAACATCGCCGGCATCGCATTCATCCTCGAGCTGGAGGACGACAACACGGCCCT
ACGCGCCGCCGTCTACGACCAACAGCGCCGACACAGCGACACCGATAGATAG

Upstream 100 bases:

>100_bases
CCACACATCCTTTCGTCAGTATCTGAACGTCAGCCGCCTGATAATCTATGTCAGACGACACAGATATTTATATAACACCG
AGAGAGATTAAGATCAAGCA

Downstream 100 bases:

>100_bases
GTTCACACGGCTTCTATGCTGACGGCGTGAGCACGAGCGAAACCATGCCGACGATCCGGGTCAGTGCCGTAGTCCTACGG
GACGACCGCGGTGCGGTGCT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MVPEDVLYPSGSPVPRLEGPRPPELPAPEKGVYGISVAAELSGAATQSLRLWERHGLLAPSRTEGGTRRYSPEDLIRIRR
ITTLVAAGVNIAGIAFILELEDDNTALRAAVYDQQRRHSDTDR

Sequences:

>Translated_123_residues
MVPEDVLYPSGSPVPRLEGPRPPELPAPEKGVYGISVAAELSGAATQSLRLWERHGLLAPSRTEGGTRRYSPEDLIRIRR
ITTLVAAGVNIAGIAFILELEDDNTALRAAVYDQQRRHSDTDR
>Mature_123_residues
MVPEDVLYPSGSPVPRLEGPRPPELPAPEKGVYGISVAAELSGAATQSLRLWERHGLLAPSRTEGGTRRYSPEDLIRIRR
ITTLVAAGVNIAGIAFILELEDDNTALRAAVYDQQRRHSDTDR

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 13457; Mature: 13457

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPEDVLYPSGSPVPRLEGPRPPELPAPEKGVYGISVAAELSGAATQSLRLWERHGLLAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCC
SRTEGGTRRYSPEDLIRIRRITTLVAAGVNIAGIAFILELEDDNTALRAAVYDQQRRHSD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEHHHHHHHHHHCCC
TDR
CCC
>Mature Secondary Structure
MVPEDVLYPSGSPVPRLEGPRPPELPAPEKGVYGISVAAELSGAATQSLRLWERHGLLAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCC
SRTEGGTRRYSPEDLIRIRRITTLVAAGVNIAGIAFILELEDDNTALRAAVYDQQRRHSD
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEHHHHHHHHHHCCC
TDR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]