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The map label for this gene is 169630548

Identifier: 169630548

GI number: 169630548

Start: 3508885

End: 3509337

Strand: Reverse

Name: 169630548

Synonym: MAB_3467c

Alternate gene names: NA

Gene position: 3509337-3508885 (Counterclockwise)

Preceding gene: 169630551

Following gene: 169630547

Centisome position: 69.26

GC content: 61.15

Gene sequence:

>453_bases
ATGCTGATGCGTACCGATCCGTTCCGGGATCTGGACCGTTTCACGCAACAGGTGTTGGGTACTGCGGCTCGCCCTGCGCT
CATGCCTATGGACGCGTGGCGAGACGGCAACGAGTTCATTGTCGAGTTCGATCTGCCCGGGATTTCAGGCGAGTCGCTTG
ATCTCGACATCGAACACAACGTGGTCACGGTGCGCGCCGAGCGCGCGCCGGTGGACCCGGGGAGAGAAATGCTCGCCAGT
GAACGCGCTCGTGGGGTGTTCTCGCGTCAACTTGTGCTCGGGGACAACTTGGATACGGAGAAGATAGCCGCGGATTACCG
AAACGGCGTCCTGCGGCTGCGTATCCCGGTGGCGGAGAAAGCCAAGCCGCGCAAGATCGTGGTGGATCGTCCAGCCGATG
CCGTGGTGATCGAGGGCGAAAACGATTCCGCAAGAGGGAAAATCAGTGCCTGA

Upstream 100 bases:

>100_bases
AATCTCTCTCGGTGTTATATAAATATCTGTGTCGTCTGACATAGATTATCAGGCGGCTGACGTTCAGATACTGACGAAAG
GATGTGTGGAGGTGGCCACC

Downstream 100 bases:

>100_bases
TTGGCCGGCCACGGTCTCCGGCTCGGCCAACTAGGATCCGGGCGGATTCTGGAGCGTGCCCAGCGGATGCCACGGCCCGG
CGACCCGGGGCATCGGATGT

Product: heat shock protein

Products: NA

Alternate protein names: 18 kDa antigen clone MINTC541 [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLMRTDPFRDLDRFTQQVLGTAARPALMPMDAWRDGNEFIVEFDLPGISGESLDLDIEHNVVTVRAERAPVDPGREMLAS
ERARGVFSRQLVLGDNLDTEKIAADYRNGVLRLRIPVAEKAKPRKIVVDRPADAVVIEGENDSARGKISA

Sequences:

>Translated_150_residues
MLMRTDPFRDLDRFTQQVLGTAARPALMPMDAWRDGNEFIVEFDLPGISGESLDLDIEHNVVTVRAERAPVDPGREMLAS
ERARGVFSRQLVLGDNLDTEKIAADYRNGVLRLRIPVAEKAKPRKIVVDRPADAVVIEGENDSARGKISA
>Mature_150_residues
MLMRTDPFRDLDRFTQQVLGTAARPALMPMDAWRDGNEFIVEFDLPGISGESLDLDIEHNVVTVRAERAPVDPGREMLAS
ERARGVFSRQLVLGDNLDTEKIAADYRNGVLRLRIPVAEKAKPRKIVVDRPADAVVIEGENDSARGKISA

Specific function: Not known. This protein is one of the major immune reactive proteins in mycobacteria [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16668; Mature: 16668

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRTDPFRDLDRFTQQVLGTAARPALMPMDAWRDGNEFIVEFDLPGISGESLDLDIEHN
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCEEEEECCC
VVTVRAERAPVDPGREMLASERARGVFSRQLVLGDNLDTEKIAADYRNGVLRLRIPVAEK
EEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCC
AKPRKIVVDRPADAVVIEGENDSARGKISA
CCCCEEEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLMRTDPFRDLDRFTQQVLGTAARPALMPMDAWRDGNEFIVEFDLPGISGESLDLDIEHN
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEEEEECCCCCCCCEEEEECCC
VVTVRAERAPVDPGREMLASERARGVFSRQLVLGDNLDTEKIAADYRNGVLRLRIPVAEK
EEEEEECCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCEEEEEECCCCC
AKPRKIVVDRPADAVVIEGENDSARGKISA
CCCCEEEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8454357 [H]