| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630535
Identifier: 169630535
GI number: 169630535
Start: 3498612
End: 3500078
Strand: Direct
Name: 169630535
Synonym: MAB_3454
Alternate gene names: NA
Gene position: 3498612-3500078 (Clockwise)
Preceding gene: 169630529
Following gene: 169630537
Centisome position: 69.04
GC content: 64.62
Gene sequence:
>1467_bases ATGTCGACGCGCCGCCGGATCTCCGTGGTCTTGATGACCTCGGCCGTTATCGGATCAAGCGTTGCGGTCGATGTTGCCCC CGTGGCATATGCCGATCCCTGCGCGGGCCCCGCCGCCGGGCTTCAGCCCCCGACTCCCGTCCCGGATGACGGCATACCCG GGCAGGCTCCACCGATCGGCCGCAGACCCGCCGGCGCCAATGACAAGGCACCCTTGCCGGAACTGGGCAAGCTGCCCCTT GCCATTCTCAAGCAGGTCCTCCCTCAACAATCGGCAAAGAAGAAGCCGGGATGGGCCCAGGAGCTGGCACGGCCGGCCCT ACCCAATCCGCCGGAGCCCGGCTCGCCGAACAACCTGCAAGATCAGCAGGCCGCCGCCGTCGCTCCTGCTCCCCCTGCGC CGGCCGTCGGCCCGGCCGCCGACGCCGCCGTCTCCCCGACCACATCGGTTGTCGGCTGGGTAACCGGAGTGGATACCGGG GCCAATACGCTGCAGAAGTTCAGCATCTCCGGAACCGACCTCGGCATCATGTGGGACAACGGCGACAACGCCGGCCGTCA GGTGCTGATGGCCTTTGGCGATACCTATGGATACTGCGGAATGAAAAGTCAGCAGTGGCGCTACAACACCCTGCTGCGCA CCCAGGACAAATCACTGTCGCGCGGTCTCGCAGTGGCGGAGGGATCCACGACCAACCCGTATGCCGGTTCGCCGCAGTCC CGTCCGGGTTACTCCAAGCAGATCATCCCGCCCATCAAGTGGGCTGCCCAGGAGCGCGGCATCATCCCCACAGCCGCCAT TTCCGTCGGCCGCACCCAGTACATGAACTACATGTCCATCAAGAGCTGGGACAGCGCCGGCGAATGGACCACCAACTATT CGGCCACCGCGGTGTCCAACGACAACGGTCAGAACTGGAAGACGTTCCCGCAGAGCATCCGTCCGGCATCGCCCGACGCC ATCAGCCAAGTCCCGTTTACCCCAGGAAACGAGAATTTCCAACAGGCCGCGTACGTCAAGGGCAACGACGGCTACATCTA CATCTTCGGAACTCCTTCCGGGCGCAGCGGATCCGGCTTCGTGTCACGCGCGTTGCCCGGAAATCTGCCCGACGCCGCCA AGCACGAGTTCTGGAATACCGATCGCGGCACGTGGGTGCCCGGCGACCCGAACGCCGCCACCCCGATCCTCTCCGGCCCG GTGGGTGAGATGTCCGCGCAGTACAACACGTACCTCAAGAAGTACCTCGTGATGTACGGCGACAAGTCAGGCGATGTCCT GCTCTCGACATCCCCTGCACCCCAGGGACCGTGGAGTCCGCCGCAGATCATCGTCACCGAATCCCAGATGCCGGGCGGCC CCTACGCGCCGTACCTGCATCCGTGGACCACCGGCAAGGAGCTGTACTTCAACCTGTCACTGTGGTCGGCGTACAACGTG ATGTTGATGCGCACCACTCTGCCGTAA
Upstream 100 bases:
>100_bases CTATCCATGCACCAGTAGCCACATTGGCCCCACCTGCCACTATCGTCACGGGAGTCAATTACTGACGTCGGTGTGACGTC CTGCCCCGGGAAGGTCTGAC
Downstream 100 bases:
>100_bases CCCGGCTGACAGCATTCCTAAAGCCGCTCAAGGATGGTGGCATTAGCCAAACCGCCTGCTTCACACATCGTTTGCAGGCC GTACCGTCCACCGCCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSTRRRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPPTPVPDDGIPGQAPPIGRRPAGANDKAPLPELGKLPL AILKQVLPQQSAKKKPGWAQELARPALPNPPEPGSPNNLQDQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTG ANTLQKFSISGTDLGIMWDNGDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEGSTTNPYAGSPQS RPGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGEWTTNYSATAVSNDNGQNWKTFPQSIRPASPDA ISQVPFTPGNENFQQAAYVKGNDGYIYIFGTPSGRSGSGFVSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGP VGEMSAQYNTYLKKYLVMYGDKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKELYFNLSLWSAYNV MLMRTTLP
Sequences:
>Translated_488_residues MSTRRRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPPTPVPDDGIPGQAPPIGRRPAGANDKAPLPELGKLPL AILKQVLPQQSAKKKPGWAQELARPALPNPPEPGSPNNLQDQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTG ANTLQKFSISGTDLGIMWDNGDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEGSTTNPYAGSPQS RPGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGEWTTNYSATAVSNDNGQNWKTFPQSIRPASPDA ISQVPFTPGNENFQQAAYVKGNDGYIYIFGTPSGRSGSGFVSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGP VGEMSAQYNTYLKKYLVMYGDKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKELYFNLSLWSAYNV MLMRTTLP >Mature_487_residues STRRRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPPTPVPDDGIPGQAPPIGRRPAGANDKAPLPELGKLPLA ILKQVLPQQSAKKKPGWAQELARPALPNPPEPGSPNNLQDQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTGA NTLQKFSISGTDLGIMWDNGDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEGSTTNPYAGSPQSR PGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGEWTTNYSATAVSNDNGQNWKTFPQSIRPASPDAI SQVPFTPGNENFQQAAYVKGNDGYIYIFGTPSGRSGSGFVSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGPV GEMSAQYNTYLKKYLVMYGDKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKELYFNLSLWSAYNVM LMRTTLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51801; Mature: 51670
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPPTPVPDDGIPGQAPPIG CCCCCEEEEEEEEHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RRPAGANDKAPLPELGKLPLAILKQVLPQQSAKKKPGWAQELARPALPNPPEPGSPNNLQ CCCCCCCCCCCCCHHCCCHHHHHHHHHCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC DQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTGANTLQKFSISGTDLGIMWDN CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHEEECCCCEEEEEECC GDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEGSTTNPYAGSPQS CCCHHHEEEEEECCCCCCCCCCCCCEEHHHHEECCCHHHHCCEEEECCCCCCCCCCCCCC RPGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGEWTTNYSATAVSN CCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHEHEEECCCCCCCEECCCEEEEECC DNGQNWKTFPQSIRPASPDAISQVPFTPGNENFQQAAYVKGNDGYIYIFGTPSGRSGSGF CCCCCCHHCHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCE VSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGPVGEMSAQYNTYLKKYLVMYG EECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEC DKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKELYFNLSLWSAYNV CCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEE MLMRTTLP EEEEECCC >Mature Secondary Structure STRRRISVVLMTSAVIGSSVAVDVAPVAYADPCAGPAAGLQPPTPVPDDGIPGQAPPIG CCCCEEEEEEEEHHHHCCCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RRPAGANDKAPLPELGKLPLAILKQVLPQQSAKKKPGWAQELARPALPNPPEPGSPNNLQ CCCCCCCCCCCCCHHCCCHHHHHHHHHCHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCC DQQAAAVAPAPPAPAVGPAADAAVSPTTSVVGWVTGVDTGANTLQKFSISGTDLGIMWDN CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHEEECCCCEEEEEECC GDNAGRQVLMAFGDTYGYCGMKSQQWRYNTLLRTQDKSLSRGLAVAEGSTTNPYAGSPQS CCCHHHEEEEEECCCCCCCCCCCCCEEHHHHEECCCHHHHCCEEEECCCCCCCCCCCCCC RPGYSKQIIPPIKWAAQERGIIPTAAISVGRTQYMNYMSIKSWDSAGEWTTNYSATAVSN CCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHEHEEECCCCCCCEECCCEEEEECC DNGQNWKTFPQSIRPASPDAISQVPFTPGNENFQQAAYVKGNDGYIYIFGTPSGRSGSGF CCCCCCHHCHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCE VSRALPGNLPDAAKHEFWNTDRGTWVPGDPNAATPILSGPVGEMSAQYNTYLKKYLVMYG EECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEC DKSGDVLLSTSPAPQGPWSPPQIIVTESQMPGGPYAPYLHPWTTGKELYFNLSLWSAYNV CCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEE MLMRTTLP EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA