| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630460
Identifier: 169630460
GI number: 169630460
Start: 3428526
End: 3429818
Strand: Direct
Name: 169630460
Synonym: MAB_3379
Alternate gene names: NA
Gene position: 3428526-3429818 (Clockwise)
Preceding gene: 169630458
Following gene: 169630466
Centisome position: 67.66
GC content: 64.66
Gene sequence:
>1293_bases GTGCTTTCCCGGGCACGAGTACTCGCGAGCATCGCCCTCGCGGCGCTCCTCACCATCACCGGCTGTTCCGGTGACGATTC GTGGATCAACATCAAAGCAGCACCCGGATGGTCCGCCTCCTACGCCGACGCGCACAACAGCAGCTACACGGCCACTGAGG GCGCTCGTGAGCTGACTCTGGAGTGGAGCCGGAACACCAAGGGCCAGATACGCAGTGCCGCCGCCATCGGCATCGACAAT TTCATCGCGGTCAGCGCCGACACCCCATCCGGCTGCACACTGATGGAGTGGGAGGACAACAGGGCAGCACGCCAACGTTG GTGCACCCGGATGATCACCGGGAGCCCGTGGTCCGGGCCGCTTGCCGACGGCTATAACAACCTCTACGTGGGCCAGCCCG GAGCCGTGGTCTCCTTCCCCCCCACCCAATGGATTCGGTGGCGTAAACCCGTCATCGGCGCCCCCACCACACCCAAGATC GTGGAGCCCGGCCGGCTCCTGATCGTCACGCACCTGGGCCAGATATTGATCTTCGATGCCCAGCGCGGTGAGGTCGTCGG AACGCCGATGGATCTGCTCGAAGGGGTCGATCCGGCCGATCCACGACGCGGTCTGGAGGATTGCGAACCGGCTCGGCCCA AGTGCCCGATATCGGCCTCCCCCGCCTACGATCCAGCGACCGGCACCATCGTGACCACGCTGTGGCAGCCGGACAAGCCG GTGCCCGTGCTGTTGGGCATCACCTACGACGCCGACGGCAAGGTGACCCTGAAGCACAAGTGGGCCAGCAAGATCATCGA TGAGGGTGTGATCGGTTCACCGGTGATGTCCAACGACGGTGAGACCGTCTACATCAACGATCGCAAGGGCTCGCTGCACG CGATGCACACCTTCGACGGCAGCCAGAAATGGTCACTGCCGCTGGGGTTCAACGCGACCACACCGCCGTCGGTGGCACCG GACGGAACGATCATCGCCGGAACCGGCGACAAGGCCACCCTGGTGGGCATCAAGGATTCGGGCGCCAAGGGTGAAATCGC CTGGCGCCGCGACGACCTCGTTCCACTTTCGACGTCGAGTCAGGCCGCCGGAAACGTGGGTTATGCCGTCGTCAGGGACG GCGATAAGGGCCTGGCCCTCGTGGTGTTCAACACCCCGGACGGGGCTACCATCAACCGCTATCCACTGCCCGATGCCACA GGATTTCCGGTGGGGATTTCGATCGGACCGGACCAGCGTGTCATCGTCACGCTGAGCGAGGGTCTGGTGTACGGGTTCCG CCCGGAGACCTAG
Upstream 100 bases:
>100_bases CCACATCGTCGTCATGGCCGCACAGCCTACGGGACGCGGCGGGACGCACACGCTACCCTGCGATGGGCCGGACCGCCCCC TAAGGAAGGAGTGCCTCACC
Downstream 100 bases:
>100_bases CCGCGCAGACGAAAGCCTTTGCACCACTGCCTATTCGGGTGATAACAACAGACAAGGGCACACTGCCGCGCAACTTCAGC CTGGTGCGTAACAACGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Pyrrolo-Quinoline Quinone Dehydrogenase
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MLSRARVLASIALAALLTITGCSGDDSWINIKAAPGWSASYADAHNSSYTATEGARELTLEWSRNTKGQIRSAAAIGIDN FIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGPLADGYNNLYVGQPGAVVSFPPTQWIRWRKPVIGAPTTPKI VEPGRLLIVTHLGQILIFDAQRGEVVGTPMDLLEGVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKP VPVLLGITYDADGKVTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDGSQKWSLPLGFNATTPPSVAP DGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSSQAAGNVGYAVVRDGDKGLALVVFNTPDGATINRYPLPDAT GFPVGISIGPDQRVIVTLSEGLVYGFRPET
Sequences:
>Translated_430_residues MLSRARVLASIALAALLTITGCSGDDSWINIKAAPGWSASYADAHNSSYTATEGARELTLEWSRNTKGQIRSAAAIGIDN FIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGPLADGYNNLYVGQPGAVVSFPPTQWIRWRKPVIGAPTTPKI VEPGRLLIVTHLGQILIFDAQRGEVVGTPMDLLEGVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKP VPVLLGITYDADGKVTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDGSQKWSLPLGFNATTPPSVAP DGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSSQAAGNVGYAVVRDGDKGLALVVFNTPDGATINRYPLPDAT GFPVGISIGPDQRVIVTLSEGLVYGFRPET >Mature_430_residues MLSRARVLASIALAALLTITGCSGDDSWINIKAAPGWSASYADAHNSSYTATEGARELTLEWSRNTKGQIRSAAAIGIDN FIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGPLADGYNNLYVGQPGAVVSFPPTQWIRWRKPVIGAPTTPKI VEPGRLLIVTHLGQILIFDAQRGEVVGTPMDLLEGVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKP VPVLLGITYDADGKVTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDGSQKWSLPLGFNATTPPSVAP DGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSSQAAGNVGYAVVRDGDKGLALVVFNTPDGATINRYPLPDAT GFPVGISIGPDQRVIVTLSEGLVYGFRPET
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45756; Mature: 45756
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRARVLASIALAALLTITGCSGDDSWINIKAAPGWSASYADAHNSSYTATEGARELTL CCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEE EWSRNTKGQIRSAAAIGIDNFIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGP EECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC LADGYNNLYVGQPGAVVSFPPTQWIRWRKPVIGAPTTPKIVEPGRLLIVTHLGQILIFDA CCCCCCEEEECCCCCEEECCCHHHHEECCCCCCCCCCCCEECCCCEEEEEECCEEEEEEC QRGEVVGTPMDLLEGVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKP CCCCEECCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC VPVLLGITYDADGKVTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDG CEEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEECCC SQKWSLPLGFNATTPPSVAPDGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSS CCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEECCCC QAAGNVGYAVVRDGDKGLALVVFNTPDGATINRYPLPDATGFPVGISIGPDQRVIVTLSE CCCCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEC GLVYGFRPET CEEEECCCCC >Mature Secondary Structure MLSRARVLASIALAALLTITGCSGDDSWINIKAAPGWSASYADAHNSSYTATEGARELTL CCCHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEE EWSRNTKGQIRSAAAIGIDNFIAVSADTPSGCTLMEWEDNRAARQRWCTRMITGSPWSGP EECCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC LADGYNNLYVGQPGAVVSFPPTQWIRWRKPVIGAPTTPKIVEPGRLLIVTHLGQILIFDA CCCCCCEEEECCCCCEEECCCHHHHEECCCCCCCCCCCCEECCCCEEEEEECCEEEEEEC QRGEVVGTPMDLLEGVDPADPRRGLEDCEPARPKCPISASPAYDPATGTIVTTLWQPDKP CCCCEECCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC VPVLLGITYDADGKVTLKHKWASKIIDEGVIGSPVMSNDGETVYINDRKGSLHAMHTFDG CEEEEEEEECCCCEEEEEEHHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEECCC SQKWSLPLGFNATTPPSVAPDGTIIAGTGDKATLVGIKDSGAKGEIAWRRDDLVPLSTSS CCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEECCCC QAAGNVGYAVVRDGDKGLALVVFNTPDGATINRYPLPDATGFPVGISIGPDQRVIVTLSE CCCCCCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEC GLVYGFRPET CEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA