Click here to switch to the map view.

The map label for this gene is rutA [H]

Identifier: 169630352

GI number: 169630352

Start: 3309655

End: 3310539

Strand: Direct

Name: rutA [H]

Synonym: MAB_3271

Alternate gene names: 169630352

Gene position: 3309655-3310539 (Clockwise)

Preceding gene: 169630330

Following gene: 169630355

Centisome position: 65.32

GC content: 67.57

Gene sequence:

>885_bases
ATGGATATCGGCATTGCGCTGCCCTTCATGTGCCGCGACTACACCCGCGAGTCGACGATCACTTGGGCCCGCCTCGCCGA
CGAGGGACCGTTCTCCACGATCTCGTCTGGTGAACGCATCTCGTATCACAACCAGGACATGTGGGTGACGCTCGCGGCCG
CGGCGGCGGTCACCGAAAGGGTGCGGATACTCGCGAATGTTTCTGTGCTACCGGCACATCCGGTACCGCTCGTCGCCAAG
CAGGCGGCGACGCTGGACGTATTGTCCGAGGGCCGATTCATCCTCGGGGTCGGCGTCGGCGGCCGCGAACACGACTACCG
CTGCCTGGACGCATCCTTCGGGCGGCGACACCAGCGCCTCGATGACCAGGTTGCCGAGCTACGCAGGTTGTGGCGGGGCG
AGCCGCCGTTCGAGGGTGCCGACCCCGTTGGGCCCGCGCCGGTACAGGACGGCGGCCCGCCCGTCGTCGCCGCGGCGATC
GGGCCGAAGTCCCTGGCCCGCGCGGCACGGTGGGCAGACGGCATCACAGGATTCAGTGTCTCCGGCGCACCCGCCGAGCT
CACCTACTCCGCCGATTCCGCACGCGCCGCATGGCAAGCCGCGGGCCACGCGGAACCGCCGGTGCTGTCCAGCGGTTGCT
TCTACACGCTGGGCATCCCCGGCGCCGAGTCCGAACTCAAGCAGTTCACCAGCGAGTACCTCGCGATTTTCGGGACGCAG
ATCGCCGAAAACGTTCCGAAGACGCTGACCAACTTCGATGCCGACGCGCTGAACCGCACGCTCGACGGCGCCGAGGAGGC
CGGGCTGGATGAGTTCATCCTGGTACCAGGCGCATCCGATGTCGCGGTGATCGAGGCGACGATCGAACTCATCCAGCGGC
GCTGA

Upstream 100 bases:

>100_bases
GGAGTCGGGATATGCGGTGTCGCGGCGGTGCTGGCACGCAGGGCGAAGTCGCGGAAAGGGCTCACGCCACAACCGTAGCG
AGAACTCCTAGGCTGCCGGT

Downstream 100 bases:

>100_bases
CCGTATCTGTCGGCGAATTGATTTGCCGCGCAGCGAAATCCGCGGCCTGGCTCGTCATGCCGTTGTCTCCGTACGAACCG
TGGGCGGCATTGTCGCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDIGIALPFMCRDYTRESTITWARLADEGPFSTISSGERISYHNQDMWVTLAAAAAVTERVRILANVSVLPAHPVPLVAK
QAATLDVLSEGRFILGVGVGGREHDYRCLDASFGRRHQRLDDQVAELRRLWRGEPPFEGADPVGPAPVQDGGPPVVAAAI
GPKSLARAARWADGITGFSVSGAPAELTYSADSARAAWQAAGHAEPPVLSSGCFYTLGIPGAESELKQFTSEYLAIFGTQ
IAENVPKTLTNFDADALNRTLDGAEEAGLDEFILVPGASDVAVIEATIELIQRR

Sequences:

>Translated_294_residues
MDIGIALPFMCRDYTRESTITWARLADEGPFSTISSGERISYHNQDMWVTLAAAAAVTERVRILANVSVLPAHPVPLVAK
QAATLDVLSEGRFILGVGVGGREHDYRCLDASFGRRHQRLDDQVAELRRLWRGEPPFEGADPVGPAPVQDGGPPVVAAAI
GPKSLARAARWADGITGFSVSGAPAELTYSADSARAAWQAAGHAEPPVLSSGCFYTLGIPGAESELKQFTSEYLAIFGTQ
IAENVPKTLTNFDADALNRTLDGAEEAGLDEFILVPGASDVAVIEATIELIQRR
>Mature_294_residues
MDIGIALPFMCRDYTRESTITWARLADEGPFSTISSGERISYHNQDMWVTLAAAAAVTERVRILANVSVLPAHPVPLVAK
QAATLDVLSEGRFILGVGVGGREHDYRCLDASFGRRHQRLDDQVAELRRLWRGEPPFEGADPVGPAPVQDGGPPVVAAAI
GPKSLARAARWADGITGFSVSGAPAELTYSADSARAAWQAAGHAEPPVLSSGCFYTLGIPGAESELKQFTSEYLAIFGTQ
IAENVPKTLTNFDADALNRTLDGAEEAGLDEFILVPGASDVAVIEATIELIQRR

Specific function: Catalyzes the pyrimidine ring opening between N-3 and C- 4 by an unusual flavin hydroperoxide-catalyzed mechanism to yield ureidoacrylate peracid. It cleaves pyrmidine rings directly by adding oxygen atoms, making a toxic ureidoacrylate peracid product wh

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family. RutA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR019914
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 31398; Mature: 31398

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIGIALPFMCRDYTRESTITWARLADEGPFSTISSGERISYHNQDMWVTLAAAAAVTER
CCCCEECHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHH
VRILANVSVLPAHPVPLVAKQAATLDVLSEGRFILGVGVGGREHDYRCLDASFGRRHQRL
HHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCHHHHHHHHH
DDQVAELRRLWRGEPPFEGADPVGPAPVQDGGPPVVAAAIGPKSLARAARWADGITGFSV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
SGAPAELTYSADSARAAWQAAGHAEPPVLSSGCFYTLGIPGAESELKQFTSEYLAIFGTQ
CCCCCEEEECCCCHHHHHHHCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
IAENVPKTLTNFDADALNRTLDGAEEAGLDEFILVPGASDVAVIEATIELIQRR
HHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDIGIALPFMCRDYTRESTITWARLADEGPFSTISSGERISYHNQDMWVTLAAAAAVTER
CCCCEECHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHHHHHHHHH
VRILANVSVLPAHPVPLVAKQAATLDVLSEGRFILGVGVGGREHDYRCLDASFGRRHQRL
HHHHHCCEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEECCHHHHHHHHH
DDQVAELRRLWRGEPPFEGADPVGPAPVQDGGPPVVAAAIGPKSLARAARWADGITGFSV
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
SGAPAELTYSADSARAAWQAAGHAEPPVLSSGCFYTLGIPGAESELKQFTSEYLAIFGTQ
CCCCCEEEECCCCHHHHHHHCCCCCCCEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHH
IAENVPKTLTNFDADALNRTLDGAEEAGLDEFILVPGASDVAVIEATIELIQRR
HHHHHHHHHHCCCHHHHHHHHCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA