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The map label for this gene is tsf

Identifier: 169630277

GI number: 169630277

Start: 3239290

End: 3240123

Strand: Reverse

Name: tsf

Synonym: MAB_3195c

Alternate gene names: 169630277

Gene position: 3240123-3239290 (Counterclockwise)

Preceding gene: 169630278

Following gene: 169630276

Centisome position: 63.94

GC content: 67.27

Gene sequence:

>834_bases
ATGGCGAATTTCACTGCCGCCGATGTGAAGCGGCTCCGGGAACTGACCGGTGCCGGAATGCTCGACTGCAAGAACGCCCT
GGCCGAGTCTGACGGTGACTTCGACAAGGCCGTCGAGGTGCTGCGCATCAAGGGCGCCAAGGACGTTGGCAAGCGCGCCG
AGCGTGCCACCGCCGAAGGCCTCGTCGTCGCGCGTGACGGTGCGCTTGTCGAGTTGAACTCGGAGACCGACTTCGTCGCC
AAGAACGCCGAGTTCCAGGCTCTCGCCGACGCCATCGTCGGTGCGGCCGCGGCCGGGAAGATCGGCGAGGTCGACGCTCT
GCTGGCCGCCAAGGTCGAGGACGGCCGGACCGTCGAGCAGGCGATCGCCGACCTGGCCGCCAAGATCGGCGAGAAGTTGG
AGCTGCGCCGGGTGGCGTACTTCGGCGGAACCGTCGAGGCCTACCTGCACAAGCGTGCCGCGGATCTGCCGCCGGCCGTG
GGTGTGCTGGTCGAGTACGAGTCGGCATCGGGCGATGCCACCGGCGCAGACGCTGCGCACGCTGTGGCCCTGCAGATCGC
AGCGCTCAAGGCCAAGTACCTGACGCGCGAGGACGTTCCGGCCGATGTGGTCGAGAACGAGCGTCGGATCGCCGAGGAGA
CCGCGAAGGCAGAGGGCAAGCCCGAGGCGGCACTGCCCAAGATCGTCGAGGGCCGCGTCACCGGTTACTACAAGGATGTC
GTGCTGTTGGATCAGCCGTCGGTGTCCGACAACAAGAAGTCTGTCAAGGCTCTGCTTGACGAGGCCGGTGTCACCGTGAC
CCGCTTCGCGCGGTTCGAGGTCGGCCAGGCCTAG

Upstream 100 bases:

>100_bases
CGAGTGGGAGCAGGAACTGCTCGCCTCCGCTGTCGCGACCACCGACGAGGCTTCAGCGCCGTCCGCTGCGGCCACCGAAA
CCACAACCGAGGAAGGCTAA

Downstream 100 bases:

>100_bases
TTCGCTTTACGTCAGTTCGGCCCCGCCGGGAGTTTCCGGGCGGGGTCGAATTGTTTCTCCGTCCCGGTGTGCGAACTCGG
GTAGTCCGTTACTCATGTTT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEVLRIKGAKDVGKRAERATAEGLVVARDGALVELNSETDFVA
KNAEFQALADAIVGAAAAGKIGEVDALLAAKVEDGRTVEQAIADLAAKIGEKLELRRVAYFGGTVEAYLHKRAADLPPAV
GVLVEYESASGDATGADAAHAVALQIAALKAKYLTREDVPADVVENERRIAEETAKAEGKPEAALPKIVEGRVTGYYKDV
VLLDQPSVSDNKKSVKALLDEAGVTVTRFARFEVGQA

Sequences:

>Translated_277_residues
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEVLRIKGAKDVGKRAERATAEGLVVARDGALVELNSETDFVA
KNAEFQALADAIVGAAAAGKIGEVDALLAAKVEDGRTVEQAIADLAAKIGEKLELRRVAYFGGTVEAYLHKRAADLPPAV
GVLVEYESASGDATGADAAHAVALQIAALKAKYLTREDVPADVVENERRIAEETAKAEGKPEAALPKIVEGRVTGYYKDV
VLLDQPSVSDNKKSVKALLDEAGVTVTRFARFEVGQA
>Mature_276_residues
ANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEVLRIKGAKDVGKRAERATAEGLVVARDGALVELNSETDFVAK
NAEFQALADAIVGAAAAGKIGEVDALLAAKVEDGRTVEQAIADLAAKIGEKLELRRVAYFGGTVEAYLHKRAADLPPAVG
VLVEYESASGDATGADAAHAVALQIAALKAKYLTREDVPADVVENERRIAEETAKAEGKPEAALPKIVEGRVTGYYKDVV
LLDQPSVSDNKKSVKALLDEAGVTVTRFARFEVGQA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Escherichia coli, GI1786366, Length=283, Percent_Identity=41.696113074205, Blast_Score=175, Evalue=3e-45,
Organism=Drosophila melanogaster, GI19921466, Length=294, Percent_Identity=28.2312925170068, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_MYCA9 (B1MDF1)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001703926.1
- ProteinModelPortal:   B1MDF1
- SMR:   B1MDF1
- EnsemblBacteria:   EBMYCT00000008879
- GeneID:   5965700
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_3195c
- GeneTree:   EBGT00050000016347
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- BioCyc:   MABS561007:MAB_3195C-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 29164; Mature: 29033

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEVLRIKGAKDVGKRAERATAEG
CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
LVVARDGALVELNSETDFVAKNAEFQALADAIVGAAAAGKIGEVDALLAAKVEDGRTVEQ
EEEEECCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
AIADLAAKIGEKLELRRVAYFGGTVEAYLHKRAADLPPAVGVLVEYESASGDATGADAAH
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH
AVALQIAALKAKYLTREDVPADVVENERRIAEETAKAEGKPEAALPKIVEGRVTGYYKDV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEE
VLLDQPSVSDNKKSVKALLDEAGVTVTRFARFEVGQA
EEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCC
>Mature Secondary Structure 
ANFTAADVKRLRELTGAGMLDCKNALAESDGDFDKAVEVLRIKGAKDVGKRAERATAEG
CCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC
LVVARDGALVELNSETDFVAKNAEFQALADAIVGAAAAGKIGEVDALLAAKVEDGRTVEQ
EEEEECCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH
AIADLAAKIGEKLELRRVAYFGGTVEAYLHKRAADLPPAVGVLVEYESASGDATGADAAH
HHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHH
AVALQIAALKAKYLTREDVPADVVENERRIAEETAKAEGKPEAALPKIVEGRVTGYYKDV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEE
VLLDQPSVSDNKKSVKALLDEAGVTVTRFARFEVGQA
EEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA