| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630266
Identifier: 169630266
GI number: 169630266
Start: 3228997
End: 3229854
Strand: Direct
Name: 169630266
Synonym: MAB_3184
Alternate gene names: NA
Gene position: 3228997-3229854 (Clockwise)
Preceding gene: 169630263
Following gene: 169630267
Centisome position: 63.72
GC content: 62.7
Gene sequence:
>858_bases TTGGGCGGCAACGATCCGTCAATGACCAGGGGGAATCTGATGGCCTTTGCCAACACACTGTCCACATCGTGGCAAATCTT CAAAACGTCGGCAAAGGTATTGAGCTCACGCAAGGAGCTCGCGGTTTTCCCCCTCCTATCCGGCATTACGTCATTGCTCG TGCTGGTGGGAATGGTGGCGCTGGGCGTGCTCCTACTACCCGCCACGACGGGCGATTCGGTTCCACCGCTCTTTTACCCC GTTTTCGCCGTCGGTTACTTCATCCTGATGTATGTCGCGACCTTCTGGCAGGCGGCGCTCATATCGCAGGCGAACATCGC GCTGGAGGGCGGAGATCCCAGCGTGGCCGCCGGCATCTCGGCAGCGGCGCAGCGCGGCGGTCGCCTCCTCCCCTGGGTCC TCATCACCGGCGTTGTCTCCTGGATCATCAGCGCCGTGGAGGAGCGGGTGCCCTTCATCGGACGGTTCCTGGACGTCGCG TGGCGCGTGGTCTCCTTCCAGGTGCTGCCCACGCTCGTGCTGGAAAACCTCGGGGCGATTGATGCCGTCAAGAAGACCAA GGAAACGCTCAAGAACGCCTGGGGCCGCAACGTCGTCGGCATCGTGGGACTGAACTTTTTCACCGCGCTGCTGTCACTCC CGGGAATCGGTCTGATCTACCTGGGCGTGGCCGCGAACATGGCCGCGGTGACGGGTGTCTTCGCGTTGTTCGGAGTGCTC TGGATCCTGGTGGCCTCCATCGTCGGCGCCGCGCTCACCGGCATCTTTCAGACAGCGCTGTACAGATTCACCGTTGACGG CCACGTGCCGGGCCCCTTTGCCGGACTGGACCTGCGCCAAGCACTCAAAACGCGGTAA
Upstream 100 bases:
>100_bases TTGCGGAGCATAGGCCGTCGGGGGTCAGGATCTGAGCATCGCGGCGCTGCATGTTTCCATCAAACCAGCCACCCGGCCCG GTAGCTACCACGCTGGTATC
Downstream 100 bases:
>100_bases ACGGGCCCGTACATAGGGGAACCGCAGGGCACGCGGGTGCGGTTCCGTAAACCACAGCCGTCACACTGGTAACTTAATGT ACCAAGAGTAACTTAAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MGGNDPSMTRGNLMAFANTLSTSWQIFKTSAKVLSSRKELAVFPLLSGITSLLVLVGMVALGVLLLPATTGDSVPPLFYP VFAVGYFILMYVATFWQAALISQANIALEGGDPSVAAGISAAAQRGGRLLPWVLITGVVSWIISAVEERVPFIGRFLDVA WRVVSFQVLPTLVLENLGAIDAVKKTKETLKNAWGRNVVGIVGLNFFTALLSLPGIGLIYLGVAANMAAVTGVFALFGVL WILVASIVGAALTGIFQTALYRFTVDGHVPGPFAGLDLRQALKTR
Sequences:
>Translated_285_residues MGGNDPSMTRGNLMAFANTLSTSWQIFKTSAKVLSSRKELAVFPLLSGITSLLVLVGMVALGVLLLPATTGDSVPPLFYP VFAVGYFILMYVATFWQAALISQANIALEGGDPSVAAGISAAAQRGGRLLPWVLITGVVSWIISAVEERVPFIGRFLDVA WRVVSFQVLPTLVLENLGAIDAVKKTKETLKNAWGRNVVGIVGLNFFTALLSLPGIGLIYLGVAANMAAVTGVFALFGVL WILVASIVGAALTGIFQTALYRFTVDGHVPGPFAGLDLRQALKTR >Mature_284_residues GGNDPSMTRGNLMAFANTLSTSWQIFKTSAKVLSSRKELAVFPLLSGITSLLVLVGMVALGVLLLPATTGDSVPPLFYPV FAVGYFILMYVATFWQAALISQANIALEGGDPSVAAGISAAAQRGGRLLPWVLITGVVSWIISAVEERVPFIGRFLDVAW RVVSFQVLPTLVLENLGAIDAVKKTKETLKNAWGRNVVGIVGLNFFTALLSLPGIGLIYLGVAANMAAVTGVFALFGVLW ILVASIVGAALTGIFQTALYRFTVDGHVPGPFAGLDLRQALKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30167; Mature: 30036
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNDPSMTRGNLMAFANTLSTSWQIFKTSAKVLSSRKELAVFPLLSGITSLLVLVGMVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LGVLLLPATTGDSVPPLFYPVFAVGYFILMYVATFWQAALISQANIALEGGDPSVAAGIS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH AAAQRGGRLLPWVLITGVVSWIISAVEERVPFIGRFLDVAWRVVSFQVLPTLVLENLGAI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DAVKKTKETLKNAWGRNVVGIVGLNFFTALLSLPGIGLIYLGVAANMAAVTGVFALFGVL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WILVASIVGAALTGIFQTALYRFTVDGHVPGPFAGLDLRQALKTR HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure GGNDPSMTRGNLMAFANTLSTSWQIFKTSAKVLSSRKELAVFPLLSGITSLLVLVGMVA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LGVLLLPATTGDSVPPLFYPVFAVGYFILMYVATFWQAALISQANIALEGGDPSVAAGIS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH AAAQRGGRLLPWVLITGVVSWIISAVEERVPFIGRFLDVAWRVVSFQVLPTLVLENLGAI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH DAVKKTKETLKNAWGRNVVGIVGLNFFTALLSLPGIGLIYLGVAANMAAVTGVFALFGVL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WILVASIVGAALTGIFQTALYRFTVDGHVPGPFAGLDLRQALKTR HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA