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The map label for this gene is 169630247

Identifier: 169630247

GI number: 169630247

Start: 3212109

End: 3212855

Strand: Reverse

Name: 169630247

Synonym: MAB_3165c

Alternate gene names: NA

Gene position: 3212855-3212109 (Counterclockwise)

Preceding gene: 169630249

Following gene: 169630246

Centisome position: 63.41

GC content: 63.72

Gene sequence:

>747_bases
GTGCTTGTGGTGACCGGGCTCGTCAGCCTCCTGATGAATGCCGCGGTCACCGCACCCGCGACCCTCGGCCACGCATTGGC
CGCAAGTCCCAGCGGGGTGGCCTCGGTGTCGCCCACGCCCGGGCAGACGGTCGGGGTGGCCATGCCGGTGACGATCCGTT
TCGCAGCCCCTGTCGCCGACAGGATCGCCGCCGAGCGGTCCATCGAGTTCTCGGCGCCGAAGGTCCCGGCCGGGGCGTTC
AGCTGGGTCGACAATGCGACGGTCCGTTTCACTCCTCGTGAATATTGGCCTGCACATTCGTCGATCACCGTGTCGGTGAA
CGGTGTGAGCGGAATGAAGTACAAGTTCCAGACCGGCTCGGAGGTGCTGGGTATCGGCAGCATCAGCGGCCACACCTTCA
CGGTGAAGATCGATGGCACGGTGATGCGAACGATGCCCGCGTCGATGGGAAAGCCCAAGCACCCCACACCGGTCGGGTCC
TTCACTGCCTTGGAGAAGCAGAGCCCTGTGGTCATGGACTCCCGGACCATCGGAATTCCGCTGAATGACCCCGAGGGTTA
CAAGCTGACCGTCTACTACGCGGTTCGGGTCACCTGGGGCGGCGTGTATGTGCACAGCGCCCCGTGGTCGACGGGAGCTC
AGGGCAACTCCAACGTCAGCCATGGCTGCATCAATCTGAGCCCGGATAACGCGTCCTGGTACTACAACACCGTCAGCATT
GGCGACCCGATCATCATCAACGCGTAA

Upstream 100 bases:

>100_bases
TGTGCGCGCTGTCGCTAACGTTCCGCCAGGCGTTTACGAACTACCATGTAGAAAACAGCATCCAGGGAGGATCGAGAGCT
TGCGCAGAGCATTTCGGAGT

Downstream 100 bases:

>100_bases
CGACCGCGGTGGGCCGCTCCGCGGACCCCGCTACGCTGCCTTCATGACTGTTTCTGATTCTCTTCGCGCAAGCGGCTCAT
CGCCACGTGCCGCACTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLVVTGLVSLLMNAAVTAPATLGHALAASPSGVASVSPTPGQTVGVAMPVTIRFAAPVADRIAAERSIEFSAPKVPAGAF
SWVDNATVRFTPREYWPAHSSITVSVNGVSGMKYKFQTGSEVLGIGSISGHTFTVKIDGTVMRTMPASMGKPKHPTPVGS
FTALEKQSPVVMDSRTIGIPLNDPEGYKLTVYYAVRVTWGGVYVHSAPWSTGAQGNSNVSHGCINLSPDNASWYYNTVSI
GDPIIINA

Sequences:

>Translated_248_residues
MLVVTGLVSLLMNAAVTAPATLGHALAASPSGVASVSPTPGQTVGVAMPVTIRFAAPVADRIAAERSIEFSAPKVPAGAF
SWVDNATVRFTPREYWPAHSSITVSVNGVSGMKYKFQTGSEVLGIGSISGHTFTVKIDGTVMRTMPASMGKPKHPTPVGS
FTALEKQSPVVMDSRTIGIPLNDPEGYKLTVYYAVRVTWGGVYVHSAPWSTGAQGNSNVSHGCINLSPDNASWYYNTVSI
GDPIIINA
>Mature_248_residues
MLVVTGLVSLLMNAAVTAPATLGHALAASPSGVASVSPTPGQTVGVAMPVTIRFAAPVADRIAAERSIEFSAPKVPAGAF
SWVDNATVRFTPREYWPAHSSITVSVNGVSGMKYKFQTGSEVLGIGSISGHTFTVKIDGTVMRTMPASMGKPKHPTPVGS
FTALEKQSPVVMDSRTIGIPLNDPEGYKLTVYYAVRVTWGGVYVHSAPWSTGAQGNSNVSHGCINLSPDNASWYYNTVSI
GDPIIINA

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 25963; Mature: 25963

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVTGLVSLLMNAAVTAPATLGHALAASPSGVASVSPTPGQTVGVAMPVTIRFAAPVAD
CEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCCCEEEEEEEEEEEEECCHHH
RIAAERSIEFSAPKVPAGAFSWVDNATVRFTPREYWPAHSSITVSVNGVSGMKYKFQTGS
HHHHHCCEEECCCCCCCCCEECCCCCEEEECCHHHCCCCCEEEEEEECCCCEEEEECCCC
EVLGIGSISGHTFTVKIDGTVMRTMPASMGKPKHPTPVGSFTALEKQSPVVMDSRTIGIP
EEEEEECCCCCEEEEEECCEEEEECCHHCCCCCCCCCCCCEEEECCCCCEEECCEEEEEE
LNDPEGYKLTVYYAVRVTWGGVYVHSAPWSTGAQGNSNVSHGCINLSPDNASWYYNTVSI
CCCCCCCEEEEEEEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEC
GDPIIINA
CCEEEEEC
>Mature Secondary Structure
MLVVTGLVSLLMNAAVTAPATLGHALAASPSGVASVSPTPGQTVGVAMPVTIRFAAPVAD
CEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCCCCEEEEEEEEEEEEECCHHH
RIAAERSIEFSAPKVPAGAFSWVDNATVRFTPREYWPAHSSITVSVNGVSGMKYKFQTGS
HHHHHCCEEECCCCCCCCCEECCCCCEEEECCHHHCCCCCEEEEEEECCCCEEEEECCCC
EVLGIGSISGHTFTVKIDGTVMRTMPASMGKPKHPTPVGSFTALEKQSPVVMDSRTIGIP
EEEEEECCCCCEEEEEECCEEEEECCHHCCCCCCCCCCCCEEEECCCCCEEECCEEEEEE
LNDPEGYKLTVYYAVRVTWGGVYVHSAPWSTGAQGNSNVSHGCINLSPDNASWYYNTVSI
CCCCCCCEEEEEEEEEEEECEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEC
GDPIIINA
CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]