| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630239
Identifier: 169630239
GI number: 169630239
Start: 3203322
End: 3205190
Strand: Reverse
Name: 169630239
Synonym: MAB_3157c
Alternate gene names: NA
Gene position: 3205190-3203322 (Counterclockwise)
Preceding gene: 169630240
Following gene: 169630238
Centisome position: 63.25
GC content: 66.93
Gene sequence:
>1869_bases ATGGCTAGCGCCACAGCCGGATACCCGCTGAGTGCGATCGTCGGCCACGATCGGCTGCGATTGGCCCTGGTGCTTTCGGC GGTGCGGCCCGACATCGGCGGTGTGCTCATCCGTGGCGAAAAGGGCACGGCCAAATCGACTGCGGTGCGCGCCCTGGCGT CGGTACTGGGTTCAGTCGACGGGGCACGGCTGGTGGAGCTGCCCATCGGTGCCACCGAGGATCGGGTCGTGGGCTCCCTG GACCTGCAGAAGGTATTGCGCGACGGCGAACACGCTTTCTCCCCGGGGCTTCTGGCGCGTGCCGACGGTGGCGTTCTGTA CGTGGACGAGGTCAACTTACTGCATGATCACCTTGTCGATGTGGTCCTGGACGCGGCGGCGATGGGCCGGGTACATGTGG AGCGCGACGGCGTATCTCATTCGTACGATGCGAGATTCGTGTTGATCGGCACCATGAATCCCGAGGAGGGGGAGCTGCGT CCCCAGCTGCTCGACCGTTTCGGATTCGCGGTGGACATTCATGCCTCCCGTGATGTCGAGGTGCGGGCCGAAGTCATCCG GCGGCGGCTTGCCTATGAGGCAGATCCCGCGGGTTTCGTCTCGAGGTACGCATCGGAGGAGGCCGAGCTGGCGGCCCGTA TTGCCGATGCTCGGCAGCTACTTGCTCGAGTTGTCCTGCCCGACGCCGAATTACGGCGCATAGCGACCCTGTGTGCTGCC TTTGACGTGGACGGAATGCGTGCCGATCTGGTGGTGGCGCGCGCTGCGATCGCCCACGCGGCGTGGCGTGGCGCCGACAC CGTCGGTGAGCCCGATATCCGAGTGGCAGCGGAGCTGGCACTGCCACATCGGCGCCGCCGGGATCCGTTCGATGAACCGG GTCTGGATCCGGATCAGCTCGACCAGGCGATGCGTGACAGCGCCCCGCCGCAGGATCAGGATGGGGAAGATCCTGACCCC GAGCCGGACGGCCCGGGCGGTGGTGCGTCCGATTCTGCCCCGGATCCTGCGAAAGCAAGTGATTCGCAGCAAGATTCGGC GTACGCGGCTGGGTCGTCGCGGCCCAGCCCGGCGCCTTCGGCGACCTTTCGCACCAAGACTTTGCGGGTTCCGGGAGTTG GCATGGGAGCCCCGGGGAAGCGCTCCGTGGCCCGCAACCGCGCCGGCAAGGTGATTGCGCCGAGTTCGGACGAGGGATTC GGGGTGCATGTGATCGGCACCTTGATGTCCGCCGCGAGTCGGGTGACCGAACCTGGGCGGCTACCCAGACCGGTGCTTAC CGATCTGCAGTGGGCGATAAGGGAAGGCCGCGAAGGCAACCTGGTGATCTTTGTGGTCGATGCCTCGGGGTCCATGGCCG CGCGCCAGAAGATGTCGGCAGTCAGCGGCGCGACCTTGTCCCTGCTGCGTGATGCCTATCAGCGCCGTGACAAGGTCGCG GTCATCACGTTCCGCGGGCAGGATGCCGCCATGCTGCTGGCGCCCACCGGCTCGACTCATATCGCGGGCCGCAGGCTGCA GCGGTTCGATACCGGCGGCAAGACTCCCTTGGCGCAGGGTCTGCTGGCCGCGCGTGACTTGGTGGCACGCGAGCGTGGAC GTGACCCGCACCGGCGCGCTTTGGTGGTGGTGCTCACCGACGGGCGTGCTACCGGTGGTCGGGACCCCTTGGGGCGCACA CGTCGCGCTTCGGCCCTGCTGCGTGCCGAACAGGTCGCCTGCGTGGTGATCGACTGTGAGACATCTTTCGTGCGGATGGA TTTGGCTGTCACTCTGGCGCAGCAGCTCGACGCGCCGGTGATCCAGCTTGACCATCTGAACGCTGACCGGCTCGCCGGAG TGGTGCGCGGCGCGACTGCCGCTGCGTGA
Upstream 100 bases:
>100_bases CACCTGAAAGACATGTATGGCAAGCTGGGATTCGTGGTTTCCGGTGACGAATTCCTCGAGGACGAGATACCGCACGTACC TATGACGTGGGTGGCCGGAA
Downstream 100 bases:
>100_bases GCTAGCAGAGGAGGTTCGGATGCCACAGGGGCAGCCATTGGTGGTGCCGCAGGACGGCCTGACCACCAAGGCACGTCGCA ACGCGCCGATTCTGGCAGTG
Product: magnesium-chelatase
Products: ADP; phosphate; Mg-protoporphyrin IX; H+
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 621
Protein sequence:
>622_residues MASATAGYPLSAIVGHDRLRLALVLSAVRPDIGGVLIRGEKGTAKSTAVRALASVLGSVDGARLVELPIGATEDRVVGSL DLQKVLRDGEHAFSPGLLARADGGVLYVDEVNLLHDHLVDVVLDAAAMGRVHVERDGVSHSYDARFVLIGTMNPEEGELR PQLLDRFGFAVDIHASRDVEVRAEVIRRRLAYEADPAGFVSRYASEEAELAARIADARQLLARVVLPDAELRRIATLCAA FDVDGMRADLVVARAAIAHAAWRGADTVGEPDIRVAAELALPHRRRRDPFDEPGLDPDQLDQAMRDSAPPQDQDGEDPDP EPDGPGGGASDSAPDPAKASDSQQDSAYAAGSSRPSPAPSATFRTKTLRVPGVGMGAPGKRSVARNRAGKVIAPSSDEGF GVHVIGTLMSAASRVTEPGRLPRPVLTDLQWAIREGREGNLVIFVVDASGSMAARQKMSAVSGATLSLLRDAYQRRDKVA VITFRGQDAAMLLAPTGSTHIAGRRLQRFDTGGKTPLAQGLLAARDLVARERGRDPHRRALVVVLTDGRATGGRDPLGRT RRASALLRAEQVACVVIDCETSFVRMDLAVTLAQQLDAPVIQLDHLNADRLAGVVRGATAAA
Sequences:
>Translated_622_residues MASATAGYPLSAIVGHDRLRLALVLSAVRPDIGGVLIRGEKGTAKSTAVRALASVLGSVDGARLVELPIGATEDRVVGSL DLQKVLRDGEHAFSPGLLARADGGVLYVDEVNLLHDHLVDVVLDAAAMGRVHVERDGVSHSYDARFVLIGTMNPEEGELR PQLLDRFGFAVDIHASRDVEVRAEVIRRRLAYEADPAGFVSRYASEEAELAARIADARQLLARVVLPDAELRRIATLCAA FDVDGMRADLVVARAAIAHAAWRGADTVGEPDIRVAAELALPHRRRRDPFDEPGLDPDQLDQAMRDSAPPQDQDGEDPDP EPDGPGGGASDSAPDPAKASDSQQDSAYAAGSSRPSPAPSATFRTKTLRVPGVGMGAPGKRSVARNRAGKVIAPSSDEGF GVHVIGTLMSAASRVTEPGRLPRPVLTDLQWAIREGREGNLVIFVVDASGSMAARQKMSAVSGATLSLLRDAYQRRDKVA VITFRGQDAAMLLAPTGSTHIAGRRLQRFDTGGKTPLAQGLLAARDLVARERGRDPHRRALVVVLTDGRATGGRDPLGRT RRASALLRAEQVACVVIDCETSFVRMDLAVTLAQQLDAPVIQLDHLNADRLAGVVRGATAAA >Mature_621_residues ASATAGYPLSAIVGHDRLRLALVLSAVRPDIGGVLIRGEKGTAKSTAVRALASVLGSVDGARLVELPIGATEDRVVGSLD LQKVLRDGEHAFSPGLLARADGGVLYVDEVNLLHDHLVDVVLDAAAMGRVHVERDGVSHSYDARFVLIGTMNPEEGELRP QLLDRFGFAVDIHASRDVEVRAEVIRRRLAYEADPAGFVSRYASEEAELAARIADARQLLARVVLPDAELRRIATLCAAF DVDGMRADLVVARAAIAHAAWRGADTVGEPDIRVAAELALPHRRRRDPFDEPGLDPDQLDQAMRDSAPPQDQDGEDPDPE PDGPGGGASDSAPDPAKASDSQQDSAYAAGSSRPSPAPSATFRTKTLRVPGVGMGAPGKRSVARNRAGKVIAPSSDEGFG VHVIGTLMSAASRVTEPGRLPRPVLTDLQWAIREGREGNLVIFVVDASGSMAARQKMSAVSGATLSLLRDAYQRRDKVAV ITFRGQDAAMLLAPTGSTHIAGRRLQRFDTGGKTPLAQGLLAARDLVARERGRDPHRRALVVVLTDGRATGGRDPLGRTR RASALLRAEQVACVVIDCETSFVRMDLAVTLAQQLDAPVIQLDHLNADRLAGVVRGATAAA
Specific function: Unknown
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR012804 - InterPro: IPR002035 [H]
Pfam domain/function: PF07728 AAA_5; PF00092 VWA [H]
EC number: 6.6.1.1
Molecular weight: Translated: 65972; Mature: 65840
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASATAGYPLSAIVGHDRLRLALVLSAVRPDIGGVLIRGEKGTAKSTAVRALASVLGSVD CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC GARLVELPIGATEDRVVGSLDLQKVLRDGEHAFSPGLLARADGGVLYVDEVNLLHDHLVD CCEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECHHHHHHHHHH VVLDAAAMGRVHVERDGVSHSYDARFVLIGTMNPEEGELRPQLLDRFGFAVDIHASRDVE HHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCHH VRAEVIRRRLAYEADPAGFVSRYASEEAELAARIADARQLLARVVLPDAELRRIATLCAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FDVDGMRADLVVARAAIAHAAWRGADTVGEPDIRVAAELALPHRRRRDPFDEPGLDPDQL HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHCCCCCCCCCCCHHHH DQAMRDSAPPQDQDGEDPDPEPDGPGGGASDSAPDPAKASDSQQDSAYAAGSSRPSPAPS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC ATFRTKTLRVPGVGMGAPGKRSVARNRAGKVIAPSSDEGFGVHVIGTLMSAASRVTEPGR CCEEEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCC LPRPVLTDLQWAIREGREGNLVIFVVDASGSMAARQKMSAVSGATLSLLRDAYQRRDKVA CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEE VITFRGQDAAMLLAPTGSTHIAGRRLQRFDTGGKTPLAQGLLAARDLVARERGRDPHRRA EEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE LVVVLTDGRATGGRDPLGRTRRASALLRAEQVACVVIDCETSFVRMDLAVTLAQQLDAPV EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHHHHHHHCCCCE IQLDHLNADRLAGVVRGATAAA EEEECCCHHHHHHHHHCHHCCC >Mature Secondary Structure ASATAGYPLSAIVGHDRLRLALVLSAVRPDIGGVLIRGEKGTAKSTAVRALASVLGSVD CCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCC GARLVELPIGATEDRVVGSLDLQKVLRDGEHAFSPGLLARADGGVLYVDEVNLLHDHLVD CCEEEEECCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECHHHHHHHHHH VVLDAAAMGRVHVERDGVSHSYDARFVLIGTMNPEEGELRPQLLDRFGFAVDIHASRDVE HHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEECCCCHH VRAEVIRRRLAYEADPAGFVSRYASEEAELAARIADARQLLARVVLPDAELRRIATLCAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH FDVDGMRADLVVARAAIAHAAWRGADTVGEPDIRVAAELALPHRRRRDPFDEPGLDPDQL HCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHCCCCCCCCCCCHHHH DQAMRDSAPPQDQDGEDPDPEPDGPGGGASDSAPDPAKASDSQQDSAYAAGSSRPSPAPS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC ATFRTKTLRVPGVGMGAPGKRSVARNRAGKVIAPSSDEGFGVHVIGTLMSAASRVTEPGR CCEEEEEEECCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCC LPRPVLTDLQWAIREGREGNLVIFVVDASGSMAARQKMSAVSGATLSLLRDAYQRRDKVA CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCEE VITFRGQDAAMLLAPTGSTHIAGRRLQRFDTGGKTPLAQGLLAARDLVARERGRDPHRRA EEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE LVVVLTDGRATGGRDPLGRTRRASALLRAEQVACVVIDCETSFVRMDLAVTLAQQLDAPV EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCEEHHHHHHHHHHHCCCCE IQLDHLNADRLAGVVRGATAAA EEEECCCHHHHHHHHHCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; protoporphyrin IX; Mg2+; H2O
Specific reaction: ATP + protoporphyrin IX + Mg2+ + H2O = ADP + phosphate + Mg-protoporphyrin IX + 2 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]