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The map label for this gene is rimP

Identifier: 169630218

GI number: 169630218

Start: 3176142

End: 3176711

Strand: Reverse

Name: rimP

Synonym: MAB_3136c

Alternate gene names: 169630218

Gene position: 3176711-3176142 (Counterclockwise)

Preceding gene: 169630221

Following gene: 169630217

Centisome position: 62.69

GC content: 63.33

Gene sequence:

>570_bases
ATGCCGGATCCTCTTGACCCGAGTGACTCGTCGACGGGGCTGCCATCTGATGACCAGGTGCTCGAGCTGCTTGCTCCCGA
ATTTTCCCGTTCCGGCGTAGAGATCGAAAGTGTCGTGGTGAGCGACGGCGGCGTGGCAGGTAGGCCGTCCCGCATCGCGG
TGGTGGTCGATTCGGATACGCCGGTGGACTTGGATGCGGTTGCGGGGCTCAGCAGGACAGCGTCAGCGTTGTTGGACGAG
GCGGACACCGGCTGGCAGGCCTACGAGCTCGAGATCACCACACCGGGTGTTGATCGGCCGCTCACCACCGTGGCGCACTT
CCGGCGGGCACACCTGAGACTGGCCCAGATCCGCCTTACCAATGGCGAGGATCTTCTTGGGCGTATCGGCATCACGCATG
ATGACGGGGTGCAGGTGGTGCTGCGCAAACCCATCAAGGGGACCGGATGGACCGTGCGTGATCTTGCGTTCTCGGATATC
GAGAGCGCCGTCGTGCAGGTGGAGTTCAACACGCCCAACCCGCAGGAACTCAATCTGGCTGGGGCAGCCGAAACTGGAGG
TGGCGCATGA

Upstream 100 bases:

>100_bases
CCCTCGCCGGGCGTAAGGTGGAGTGCTGGTCAGGACGAAGGTCCGACTAGTGTGTGCAAGCCGAACGCCCGACAACTCAA
GATGAGGAGCCACAAACGTC

Downstream 100 bases:

>100_bases
ATATCGATCCCGCAGCGGTAAACCTGATGGCTGCCGATAAGGGCATCACGGTCGACGAGGCGATCGACATCATCAAGTCG
GCGCTGCTCACCGCGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MPDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDTPVDLDAVAGLSRTASALLDE
ADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLTNGEDLLGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDI
ESAVVQVEFNTPNPQELNLAGAAETGGGA

Sequences:

>Translated_189_residues
MPDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDTPVDLDAVAGLSRTASALLDE
ADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLTNGEDLLGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDI
ESAVVQVEFNTPNPQELNLAGAAETGGGA
>Mature_188_residues
PDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDTPVDLDAVAGLSRTASALLDEA
DTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLTNGEDLLGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDIE
SAVVQVEFNTPNPQELNLAGAAETGGGA

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_MYCA9 (B1MD92)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001703867.1
- ProteinModelPortal:   B1MD92
- SMR:   B1MD92
- EnsemblBacteria:   EBMYCT00000008709
- GeneID:   5965641
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_3136c
- GeneTree:   EBGT00050000015899
- HOGENOM:   HBG668072
- OMA:   STTQSER
- ProtClustDB:   PRK00092
- BioCyc:   MABS561007:MAB_3136C-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 19919; Mature: 19788

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDT
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCC
PVDLDAVAGLSRTASALLDEADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLT
CCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEC
NGEDLLGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDIESAVVQVEFNTPNPQELNLA
CCCCHHEEECCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCEEEEE
GAAETGGGA
ECCCCCCCC
>Mature Secondary Structure 
PDPLDPSDSSTGLPSDDQVLELLAPEFSRSGVEIESVVVSDGGVAGRPSRIAVVVDSDT
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCC
PVDLDAVAGLSRTASALLDEADTGWQAYELEITTPGVDRPLTTVAHFRRAHLRLAQIRLT
CCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEC
NGEDLLGRIGITHDDGVQVVLRKPIKGTGWTVRDLAFSDIESAVVQVEFNTPNPQELNLA
CCCCHHEEECCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCEEEEE
GAAETGGGA
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA