| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630138
Identifier: 169630138
GI number: 169630138
Start: 3106633
End: 3107520
Strand: Reverse
Name: 169630138
Synonym: MAB_3055c
Alternate gene names: NA
Gene position: 3107520-3106633 (Counterclockwise)
Preceding gene: 169630139
Following gene: 169630137
Centisome position: 61.33
GC content: 63.96
Gene sequence:
>888_bases ATGGCCTATCACCCCGGTGAACTCGCCGTTCAGCACCGAATGGGTCAGTCCGACAACGCCATTCGAGTCGGTCAGATCAT CTCGGCAGATATACCGGAGGTTGCGGCGGCCTTTCTGGCCGCCCAGCCGCTGGTGTTTATTTCAGCGCGAGATGACGATG GCCGCATGTGGGCGAGCCAGATCGTGGGCCCGCCGGGTTTCGCGCACGCCGCCGATGCCCGAACCATCGTGATAGACGCG ACGCCGGACTACGGTGATCCTCTGGCCGGGGTTCTTCAATCGGAGCGCAAGATCGGGATGCTCGCCTTGCAGCCGCAGCG CCGGCGCCGGATGCGTGTCAACGGCACATCCGTGCCTTCGGGGGACGGTCTGATTGTCACCACTGACCAGGTGTACTCGA ACTGCCCCAAGTACATCGCACGGCGCGATATCTCAGAAATCGGCCCCAGCCTGCCCGGTGAGACGCGTCGCGGGAGCGCT CTGGACGACGCTCAACAACAGGCGGTTTCGGTGACCGACACCTTCATCATCGGAACGGCCGACGGTGACGGCAACGCCGA TGCGTCGCATCGCGGTGGCAACCCGGGTTTTCTGCGCCTGCTGTCGCCGAAGTTGCTGCGCTGGCCCGATTACCTGGGCA ACTCGATGTTCATGACATTAGGAAATCTGCACGTCGACCCGCGGTGTGGCCTGTTGATTCCCGACTGGCGCACCGGATCG ACGTTGCAGCTCACCGGGACGGCGCGCCTGAATTGGGATGAGAGCACCTTCGCCCCGGGCGCGCAGTGCTCGGTCGACTT CACCATCGACGAGGTTGTTGAGACCGTCAATGGCAGCCCTCTGCGGTGGGGGCATGCCGAACCCTCGCCGGCCAATCCAC CGCTGTAG
Upstream 100 bases:
>100_bases ACCGATCCGGATGGAATACGTCTTGAGGTGTTCGCGGCGAGCGGCGCCGAGCAGCACCAAGCGCCAGTGGGCGACGCGCC CACCTGCGGGTTCTTCTGAG
Downstream 100 bases:
>100_bases ACGCTGTAGACAAGGAAAGACACATGACACGCCCGCCGTTGCCGCCATTCGACATCGAAACCGCCCACCAGAAGGTACGG GCCGCCGAGAATGCGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MAYHPGELAVQHRMGQSDNAIRVGQIISADIPEVAAAFLAAQPLVFISARDDDGRMWASQIVGPPGFAHAADARTIVIDA TPDYGDPLAGVLQSERKIGMLALQPQRRRRMRVNGTSVPSGDGLIVTTDQVYSNCPKYIARRDISEIGPSLPGETRRGSA LDDAQQQAVSVTDTFIIGTADGDGNADASHRGGNPGFLRLLSPKLLRWPDYLGNSMFMTLGNLHVDPRCGLLIPDWRTGS TLQLTGTARLNWDESTFAPGAQCSVDFTIDEVVETVNGSPLRWGHAEPSPANPPL
Sequences:
>Translated_295_residues MAYHPGELAVQHRMGQSDNAIRVGQIISADIPEVAAAFLAAQPLVFISARDDDGRMWASQIVGPPGFAHAADARTIVIDA TPDYGDPLAGVLQSERKIGMLALQPQRRRRMRVNGTSVPSGDGLIVTTDQVYSNCPKYIARRDISEIGPSLPGETRRGSA LDDAQQQAVSVTDTFIIGTADGDGNADASHRGGNPGFLRLLSPKLLRWPDYLGNSMFMTLGNLHVDPRCGLLIPDWRTGS TLQLTGTARLNWDESTFAPGAQCSVDFTIDEVVETVNGSPLRWGHAEPSPANPPL >Mature_294_residues AYHPGELAVQHRMGQSDNAIRVGQIISADIPEVAAAFLAAQPLVFISARDDDGRMWASQIVGPPGFAHAADARTIVIDAT PDYGDPLAGVLQSERKIGMLALQPQRRRRMRVNGTSVPSGDGLIVTTDQVYSNCPKYIARRDISEIGPSLPGETRRGSAL DDAQQQAVSVTDTFIIGTADGDGNADASHRGGNPGFLRLLSPKLLRWPDYLGNSMFMTLGNLHVDPRCGLLIPDWRTGST LQLTGTARLNWDESTFAPGAQCSVDFTIDEVVETVNGSPLRWGHAEPSPANPPL
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31691; Mature: 31560
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHPGELAVQHRMGQSDNAIRVGQIISADIPEVAAAFLAAQPLVFISARDDDGRMWASQ CCCCCHHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH IVGPPGFAHAADARTIVIDATPDYGDPLAGVLQSERKIGMLALQPQRRRRMRVNGTSVPS HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECHHHHCEEEECCCCCCC GDGLIVTTDQVYSNCPKYIARRDISEIGPSLPGETRRGSALDDAQQQAVSVTDTFIIGTA CCCEEEECHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEEEEEECC DGDGNADASHRGGNPGFLRLLSPKLLRWPDYLGNSMFMTLGNLHVDPRCGLLIPDWRTGS CCCCCCCCCCCCCCCCEEEECCCHHHCCHHHHCCEEEEEECCEEECCCCCEEECCCCCCC TLQLTGTARLNWDESTFAPGAQCSVDFTIDEVVETVNGSPLRWGHAEPSPANPPL EEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCCCC >Mature Secondary Structure AYHPGELAVQHRMGQSDNAIRVGQIISADIPEVAAAFLAAQPLVFISARDDDGRMWASQ CCCCHHHHHHHHCCCCCCCEEECHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHH IVGPPGFAHAADARTIVIDATPDYGDPLAGVLQSERKIGMLALQPQRRRRMRVNGTSVPS HCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEECHHHHCEEEECCCCCCC GDGLIVTTDQVYSNCPKYIARRDISEIGPSLPGETRRGSALDDAQQQAVSVTDTFIIGTA CCCEEEECHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEEEEEEECC DGDGNADASHRGGNPGFLRLLSPKLLRWPDYLGNSMFMTLGNLHVDPRCGLLIPDWRTGS CCCCCCCCCCCCCCCCEEEECCCHHHCCHHHHCCEEEEEECCEEECCCCCEEECCCCCCC TLQLTGTARLNWDESTFAPGAQCSVDFTIDEVVETVNGSPLRWGHAEPSPANPPL EEEEEEEEEECCCCCCCCCCCCEEEECCHHHHHHHCCCCCEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA